Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K02.2
         (1281 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD...   290   3e-78
AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA...   290   3e-78
AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p pro...   202   1e-51
AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB...   202   1e-51
X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal prot...   116   7e-26
AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p pro...    47   6e-05
AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA...    47   6e-05

>AE014296-1680|AAN11946.1|  195|Drosophila melanogaster CG3395-PD,
           isoform D protein.
          Length = 195

 Score =  290 bits (711), Expect = 3e-78
 Identities = 143/181 (79%), Positives = 155/181 (85%)
 Frame = +2

Query: 107 NSRPVGLFKAVRATSXVLLKRHVLTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELL 286
           N R   +F     T     ++  L + LK+IG  GLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 287 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 466
           TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63  TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122

Query: 467 SIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKG 646
           SIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K 
Sbjct: 123 SIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKN 182

Query: 647 Q 649
           Q
Sbjct: 183 Q 183


>AE014296-1679|AAF50249.1|  195|Drosophila melanogaster CG3395-PA,
           isoform A protein.
          Length = 195

 Score =  290 bits (711), Expect = 3e-78
 Identities = 143/181 (79%), Positives = 155/181 (85%)
 Frame = +2

Query: 107 NSRPVGLFKAVRATSXVLLKRHVLTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELL 286
           N R   +F     T     ++  L + LK+IG  GLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 287 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 466
           TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63  TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122

Query: 467 SIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKG 646
           SIHHAR+LIRQRHIRVRKQVVNIPSF+VRLDS KHIDFSLKSPFGGGRPGRVKRKNL+K 
Sbjct: 123 SIHHARVLIRQRHIRVRKQVVNIPSFVVRLDSQKHIDFSLKSPFGGGRPGRVKRKNLKKN 182

Query: 647 Q 649
           Q
Sbjct: 183 Q 183


>AY061396-1|AAL28944.1|  137|Drosophila melanogaster LD32106p
           protein.
          Length = 137

 Score =  202 bits (492), Expect = 1e-51
 Identities = 101/135 (74%), Positives = 111/135 (82%)
 Frame = +2

Query: 107 NSRPVGLFKAVRATSXVLLKRHVLTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELL 286
           N R   +F     T     ++  L + LK+IG  GLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 287 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 466
           TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63  TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122

Query: 467 SIHHARILIRQRHIR 511
           SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137


>AE014296-1681|AAF50250.1|  137|Drosophila melanogaster CG3395-PB,
           isoform B protein.
          Length = 137

 Score =  202 bits (492), Expect = 1e-51
 Identities = 101/135 (74%), Positives = 111/135 (82%)
 Frame = +2

Query: 107 NSRPVGLFKAVRATSXVLLKRHVLTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELL 286
           N R   +F     T     ++  L + LK+IG  GLRNKREVWRVKY LA+IRKAARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLRNKREVWRVKYALAKIRKAARELL 62

Query: 287 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 466
           TL+EKD KRLF+GNALLRRLVRIGVLDE +MKLDYVLGLKIEDFLERRLQTQVFK GLAK
Sbjct: 63  TLDEKDEKRLFQGNALLRRLVRIGVLDESRMKLDYVLGLKIEDFLERRLQTQVFKLGLAK 122

Query: 467 SIHHARILIRQRHIR 511
           SIHHAR+LIRQRHIR
Sbjct: 123 SIHHARVLIRQRHIR 137


>X69677-1|CAB41492.1|  197|Drosophila melanogaster ribosomal protein
           protein.
          Length = 197

 Score =  116 bits (279), Expect = 7e-26
 Identities = 77/176 (43%), Positives = 101/176 (57%), Gaps = 1/176 (0%)
 Frame = +2

Query: 107 NSRPVGLFKAVRATSXVLLKRHVLTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELL 286
           N R   +F     T     ++  L + LK+IG  GL+  R V  VKY LA+IRK ARELL
Sbjct: 3   NGRIPSVFSKTYVTPRRPYEKARLDQELKIIGEYGLQQARSV-AVKYALAKIRKVARELL 61

Query: 287 TLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAK 466
           TL+EKD KRLF+G +L+RRLVRIGVL +   +     G +    L         +AGLAK
Sbjct: 62  TLDEKDAKRLFQGKSLVRRLVRIGVL-KSPHEARLRAGSEDSGLLGASSADAGVQAGLAK 120

Query: 467 SIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHI-DFSLKSPFGGGRPGRVKRK 631
           SIHHAR+LIRQR   +  +   IPSF+V     +   +FSLK P    RP R +++
Sbjct: 121 SIHHARVLIRQRTFVLASRWSTIPSFVVTPGLPEATSNFSLKMPL-RTRPSRSRQE 175


>AY071534-1|AAL49156.1|  181|Drosophila melanogaster RE57564p
           protein.
          Length = 181

 Score = 46.8 bits (106), Expect = 6e-05
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +2

Query: 221 KREVWRVKYTLAR-IRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVL 397
           KRE +     L+R IR+ A  +  L+  +P +      LL +L  +GV ++ Q+ L+   
Sbjct: 40  KREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGVSND-QLTLETAA 98

Query: 398 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 550
            +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+F+V
Sbjct: 99  KISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149


>AE013599-2494|AAF57847.2|  181|Drosophila melanogaster CG4866-PA
           protein.
          Length = 181

 Score = 46.8 bits (106), Expect = 6e-05
 Identities = 31/111 (27%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
 Frame = +2

Query: 221 KREVWRVKYTLAR-IRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVL 397
           KRE +     L+R IR+ A  +  L+  +P +      LL +L  +GV ++ Q+ L+   
Sbjct: 40  KREDYTKYNKLSREIRELAERIAKLDASEPFKTEATTMLLNKLHAMGVSND-QLTLETAA 98

Query: 398 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 550
            +    F  RRL   + K  +++ +  A  LI   H+RV  +++  P+F+V
Sbjct: 99  KISASHFCRRRLPVIMVKLRMSEHLKAATDLIEHGHVRVGPEMIKDPAFLV 149


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,979,274
Number of Sequences: 53049
Number of extensions: 604307
Number of successful extensions: 1642
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1530
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1635
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6906482595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)