Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K02.2
         (1281 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical pr...   281   6e-76
U97189-6|AAC48162.1|  183|Caenorhabditis elegans Hypothetical pr...    44   3e-04
Z78063-3|CAB01502.1|  236|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AC006790-9|AAF60735.1|  382|Caenorhabditis elegans Hypothetical ...    29   7.1  
U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily as...    29   9.4  

>Z69302-5|CAA93262.1|  189|Caenorhabditis elegans Hypothetical
           protein F40F8.10 protein.
          Length = 189

 Score =  281 bits (690), Expect = 6e-76
 Identities = 133/157 (84%), Positives = 148/157 (94%)
 Frame = +2

Query: 176 LTKSLKLIGAXGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKRLFEGNALLRRLVRI 355
           L + LKLIG  GL+NKREVWRVKYTLA++RKAARELLTLE+KDPKRLFEGNALLRRLV+I
Sbjct: 24  LDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKI 83

Query: 356 GVLDEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNI 535
           GVLDE +MKLDYVLGLK+EDFLERRLQTQVFK GLAKSIHHARILI+Q HIRVR+QVV++
Sbjct: 84  GVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDV 143

Query: 536 PSFIVRLDSGKHIDFSLKSPFGGGRPGRVKRKNLRKG 646
           PSFIVRLDS KHIDFSL+SP+GGGRPGRVKR+ LRKG
Sbjct: 144 PSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTLRKG 180


>U97189-6|AAC48162.1|  183|Caenorhabditis elegans Hypothetical
           protein C48B6.2 protein.
          Length = 183

 Score = 43.6 bits (98), Expect = 3e-04
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
 Frame = +2

Query: 221 KREVWRVKYTLA-RIRKAARELLTLEEKDPKRLFEGNALLRRLVRIGVLDEKQMKLDYVL 397
           KRE + +  TLA + R+ A  +  L E DP R      +L +    G++      L+ + 
Sbjct: 40  KREHYALYNTLAAKSREVADLIKNLSESDPFRSKCTEDMLTKFYAAGLVPTSDT-LERIG 98

Query: 398 GLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIVRLDSGKHID 577
            +    F  RRL   +   G+ +S+  A  L+ Q H+R+  ++V  P+F+V   S   I 
Sbjct: 99  KVTGASFARRRLPVVMRNIGMCESVKTASDLVEQGHVRIGTKLVTDPAFMVTRSSEDMIT 158

Query: 578 FSLKS 592
           ++  S
Sbjct: 159 WTKAS 163


>Z78063-3|CAB01502.1|  236|Caenorhabditis elegans Hypothetical
           protein F45D3.3 protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 3/60 (5%)
 Frame = +1

Query: 370 KTDETRLCAWSE---D*GLLGASSADAGVQSWPGEVHPSCQNFDPAKAYSCPQASCEHPI 540
           KTDE    A S+   D    G +SA A V + P   + S  NFD  K  SC    C  PI
Sbjct: 107 KTDEIVESAESDSSSDTDYFGEASASAPVSN-PALTYLSGANFDNVKQPSCQMLGCTGPI 165


>AC006790-9|AAF60735.1|  382|Caenorhabditis elegans Hypothetical
           protein Y49F6B.9 protein.
          Length = 382

 Score = 29.1 bits (62), Expect = 7.1
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = -2

Query: 533 CSQLACGHEYAFAGSKFWHDG 471
           C +  CG E+ F   K WH+G
Sbjct: 152 CQRPGCGREFCFKCRKVWHEG 172


>U58749-10|AAK18879.1|  465|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 224 protein.
          Length = 465

 Score = 28.7 bits (61), Expect = 9.4
 Identities = 10/20 (50%), Positives = 12/20 (60%)
 Frame = -2

Query: 536 GCSQLACGHEYAFAGSKFWH 477
           GC +L   +EY FA  K WH
Sbjct: 339 GCDELIFANEYTFAEEKSWH 358


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,410,056
Number of Sequences: 27780
Number of extensions: 296522
Number of successful extensions: 832
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 832
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3579019094
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)