Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_K01.2
         (1313 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    25   4.9  
AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2 pro...    25   4.9  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   4.9  
AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic acetylch...    25   6.5  
AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding pr...    25   6.5  

>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -2

Query: 478 LSR*FQKWTYQYRTLCRHQILQRHLNRSNLNLW 380
           L R F +W     +LCR  +LQR  N  NL L+
Sbjct: 9   LQRIFPRWRSAQTSLCRTILLQR--NVRNLRLY 39


>AF281078-2|AAF82132.1|  755|Anopheles gambiae vitellogenin 2
           protein.
          Length = 755

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 262 EDSMPDTSISSXRAESTNSVSSDXDMSNTED 354
           +DS   +S SS  ++S +S SSD   S++E+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEE 393


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 12/31 (38%), Positives = 20/31 (64%)
 Frame = +1

Query: 262 EDSMPDTSISSXRAESTNSVSSDXDMSNTED 354
           +DS   +S SS  ++S +S SSD   S++E+
Sbjct: 363 DDSSSSSSSSSSDSDSDSSSSSDSSSSSSEE 393


>AY705404-1|AAU12513.1|  406|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 9 protein.
          Length = 406

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 7/27 (25%), Positives = 17/27 (62%)
 Frame = -3

Query: 567 IGIRIHSFLDVLKRQIPCLEGHTPVLM 487
           + + +  +L    +Q+P + GHTP+++
Sbjct: 281 LALMVTIYLVYFAQQLPAISGHTPLIV 307


>AY146746-1|AAO12061.1|  333|Anopheles gambiae odorant-binding
           protein AgamOBP43 protein.
          Length = 333

 Score = 24.6 bits (51), Expect = 6.5
 Identities = 13/48 (27%), Positives = 22/48 (45%)
 Frame = -1

Query: 728 RKCSSLSLFIWLSSAFLLGLIICVNPLKNIINGDRLSSKGTSIEELVM 585
           R    L L  WL+S  +LG+     P     N   +S+   +++E V+
Sbjct: 5   RSAFGLLLLAWLASVTILGVEAYATPPPTTANCTTVSTFDAALQECVV 52


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 888,555
Number of Sequences: 2352
Number of extensions: 15446
Number of successful extensions: 73
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 73
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 151645137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)