Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J23.2
         (1352 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z47356-7|CAD31695.1|  249|Caenorhabditis elegans Hypothetical pr...   169   3e-42
AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain (...    71   1e-12
Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical pr...    62   7e-10
Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical pr...    50   3e-06
U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical pr...    31   2.5  

>Z47356-7|CAD31695.1|  249|Caenorhabditis elegans Hypothetical
           protein T15H9.7 protein.
          Length = 249

 Score =  169 bits (412), Expect = 3e-42
 Identities = 71/123 (57%), Positives = 94/123 (76%)
 Frame = +2

Query: 626 TPRGADIVMELTVSLEELYNGNFIEITRNKPVIKPAPGTRKCNCRQEMVTRNLGPGRFQM 805
           TP+GAD+ ++L V+LEE+YNG+F+EI R K V K   GTR+CNCR EM T  +G GRFQM
Sbjct: 127 TPKGADVTIDLFVTLEEVYNGHFVEIKRKKAVYKQTSGTRQCNCRHEMRTEQMGQGRFQM 186

Query: 806 MQQTVCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTER 985
            Q  VCDECPNVK V E ++LE+EVEVGA +GH+    GEGEPH++G+PGDL   ++ ++
Sbjct: 187 FQVKVCDECPNVKLVQENKVLEVEVEVGADNGHQQIFHGEGEPHIEGDPGDLKFKIRIQK 246

Query: 986 HPQ 994
           HP+
Sbjct: 247 HPR 249


>AF016428-7|AAB65361.1|  439|Caenorhabditis elegans Dnaj domain
            (prokaryotic heat shockprotein) protein 19 protein.
          Length = 439

 Score = 71.3 bits (167), Expect = 1e-12
 Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 28/170 (16%)
 Frame = +2

Query: 641  DIVMELTVSLEELYNGNFIEITRNKPVI-KPAPGTR-------KCN-CRQ---EMVTRNL 784
            D V  L V+LEELY G   ++  +K  + K   G+        KC+ CR    + + + +
Sbjct: 141  DTVHPLNVTLEELYVGKTSKLKLSKKALCKTCEGSGGKKGEKYKCDACRGRGVKTIVQQI 200

Query: 785  GPGRFQMMQQTV---------------CDECPNVKFVNEERLLEIEVEVGAPDGHKSRLR 919
            GPG  Q MQ                  C  C   K+ N  ++LE+ V  G     K   +
Sbjct: 201  GPGMLQQMQVHCDACKGSGGKVPAGDKCKGCHGEKYENVSKILEVHVLPGMKHNDKITFK 260

Query: 920  GEGEPH-VDGEPGDLIVILKTERHPQFTRKADDLYTNVTISLQDALXGFN 1066
            G+G+    DGEPGD++++++ + H  F R  DDL+    +SL +AL G+N
Sbjct: 261  GDGDQSDPDGEPGDVVIVIQQKDHDIFKRDGDDLHMTKKLSLNEALCGYN 310


>Z92834-5|CAB07390.1|  402|Caenorhabditis elegans Hypothetical protein
            F39B2.10 protein.
          Length = 402

 Score = 62.5 bits (145), Expect = 7e-10
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
 Frame = +2

Query: 806  MQQTVCDECPNVKFVNEERLLEIEVEVGAPDGHKSRLRGEGEPHVDGE-PGDLIVILKTE 982
            +++  C +C   K V E+ ++E+ +  G  DG K    G+G+  +  E PGD +V+L   
Sbjct: 189  LEKDRCKKCNGKKQVKEDEIIEVGITPGMKDGEKFVFEGKGDEVIGIEKPGDFVVVLDEV 248

Query: 983  RHPQFTRKADDLYTNVTISLQDALXGF 1063
             H +F RK D+L     I L +AL GF
Sbjct: 249  EHEKFVRKGDNLIIQHNIDLSEALCGF 275


>Z66513-5|CAA91334.1|  331|Caenorhabditis elegans Hypothetical protein
            F54D5.8 protein.
          Length = 331

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 22/71 (30%), Positives = 40/71 (56%)
 Frame = +2

Query: 854  EERLLEIEVEVGAPDGHKSRLRGEGEPHVDGEPGDLIVILKTERHPQFTRKADDLYTNVT 1033
            E+++L + ++ G   G K     EG+ H +  P D++ ++K + HP+F R+  D+     
Sbjct: 193  EDKVLTVTIKPGWKSGTKITFPKEGDQHPNRTPADIVFVIKDKPHPKFKREGSDIKRVEK 252

Query: 1034 ISLQDALXGFN 1066
            ISL+ AL G +
Sbjct: 253  ISLKSALTGLD 263


>U80815-2|AAB37995.1| 1372|Caenorhabditis elegans Hypothetical protein
            W02C12.1 protein.
          Length = 1372

 Score = 30.7 bits (66), Expect = 2.5
 Identities = 22/75 (29%), Positives = 32/75 (42%), Gaps = 4/75 (5%)
 Frame = +2

Query: 686  GNFIEITRNKPVIKPAPGTRK----CNCRQEMVTRNLGPGRFQMMQQTVCDECPNVKFVN 853
            G +     NK  +   PGT         R++  T    PG+F + +   C  CP   F N
Sbjct: 1062 GTYRSRGENKKCVACPPGTTTEATMSTRREQCNTPKCKPGQFLVKETKNCQFCPRGTFQN 1121

Query: 854  EERLLEIEVEVGAPD 898
            EE+  E   ++ APD
Sbjct: 1122 EEQ--ESTCKLCAPD 1134


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,016,452
Number of Sequences: 27780
Number of extensions: 377358
Number of successful extensions: 850
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 792
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3808844148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)