Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J19.2
         (1314 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           27   1.6  
DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   4.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   8.5  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 26.6 bits (56), Expect = 1.6
 Identities = 14/32 (43%), Positives = 15/32 (46%), Gaps = 3/32 (9%)
 Frame = +3

Query: 504  KKPXPXGXGGGXGXSPP---XXGEXGFPXKGG 590
            K P P G GGG G SP      G  G   +GG
Sbjct: 1414 KPPGPEGVGGGGGKSPSDKHNPGTLGTDSRGG 1445


>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 4.9
 Identities = 22/74 (29%), Positives = 22/74 (29%)
 Frame = -1

Query: 663 PPXXPLXGFXXXLGPXXXNFFXGFXPLFXGXPFPPXXGGXXXXPPPXPGXXVFFXGGGGX 484
           PP   L      L P    F  GF  L    P P         PPP P       G  G 
Sbjct: 550 PPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPPPMGPPPSP----LAGGPLGG 605

Query: 483 XPKXXPPXPXGXGF 442
                PP P   GF
Sbjct: 606 PAGSRPPLPNLLGF 619


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.2 bits (50), Expect = 8.5
 Identities = 20/61 (32%), Positives = 20/61 (32%), Gaps = 5/61 (8%)
 Frame = -1

Query: 570 PFPPXXGGXXXXPP--PXPGXXVFFXGG-GGXXPKXXPPXPXGXGFFFXXKNXPPPP--P 406
           P PP  GG    PP  P P       G   G  P   P  P   G         PPP  P
Sbjct: 209 PQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRPPSAQGMQRPPMMGQPPPIRP 268

Query: 405 P 403
           P
Sbjct: 269 P 269



 Score = 24.2 bits (50), Expect = 8.5
 Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 2/46 (4%)
 Frame = -1

Query: 660 PXXPLXGFXXXLGPXXXNFFXGFXPLFXGXPFP--PXXGGXXXXPP 529
           P  P+ G    + P   N   G      G P P  P  GG    PP
Sbjct: 268 PPNPMGGPRPQISPQNSNLSGGMPSGMVGPPRPPMPMQGGAPGGPP 313


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.153    0.522 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 728,849
Number of Sequences: 2352
Number of extensions: 12238
Number of successful extensions: 21
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 151645137
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)