Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_J19.2
(1314 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 42 0.001
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 42 0.001
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 42 0.001
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 34 0.26
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.78
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.78
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 32 1.0
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 31 1.4
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 31 1.4
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 31 1.4
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 31 1.4
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.4
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.4
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 31 1.4
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 31 1.8
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 31 1.8
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 31 1.8
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.8
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.8
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.8
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 31 2.4
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 2.4
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 31 2.4
Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 30 3.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.2
Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical pr... 30 4.2
U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical pr... 30 4.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 4.2
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical pr... 29 7.3
Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical pr... 29 7.3
V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein ( Caeno... 29 7.3
J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein ( C.ele... 29 7.3
Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 9.6
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 29 9.6
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 29 9.6
U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protei... 29 9.6
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 29 9.6
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 29 9.6
AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen prot... 29 9.6
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 29 9.6
AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen prot... 29 9.6
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/77 (38%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Frame = -1
Query: 597 GFXPLFXGXPFPPXXGGXXXX-----PPPXPGXXVFFXGGG-------GXXPKXXPPXPX 454
G P+ G P PP GG PPP PG GG G P PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 453 GXGFFFXXKNXPPPPPP 403
G GF K PPPPPP
Sbjct: 778 G-GF----KGGPPPPPP 789
Score = 34.7 bits (76), Expect = 0.15
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 588 PLFXGXPFPPXXGGXXXXPPPXPGXXVFFXGGGGXXP-KXXPPXPXGXGFFFXXKNXPPP 412
P+ G P PP PPP P GG P PP P G PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 411 PPP 403
PPP
Sbjct: 761 PPP 763
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 446 PXPXGXGGLXX-GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXP 577
P P GGL PPPP P GG PP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 625 GPXXPKFFFXVXPPFXGXPXSPXXGGXXPXPPPXPXGXGFFXG 497
GP P + P G P P G P PPP P GF G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 919 PPPLXGGXPXPXXXXXXGXFXKXPPXP 839
PPP GG P P G F PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/77 (38%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Frame = -1
Query: 597 GFXPLFXGXPFPPXXGGXXXX-----PPPXPGXXVFFXGGG-------GXXPKXXPPXPX 454
G P+ G P PP GG PPP PG GG G P PP P
Sbjct: 718 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Query: 453 GXGFFFXXKNXPPPPPP 403
G GF K PPPPPP
Sbjct: 778 G-GF----KGGPPPPPP 789
Score = 34.7 bits (76), Expect = 0.15
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 588 PLFXGXPFPPXXGGXXXXPPPXPGXXVFFXGGGGXXP-KXXPPXPXGXGFFFXXKNXPPP 412
P+ G P PP PPP P GG P PP P G PPP
Sbjct: 708 PITGGPPPPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPP 760
Query: 411 PPP 403
PPP
Sbjct: 761 PPP 763
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 446 PXPXGXGGLXX-GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXP 577
P P GGL PPPP P GG PP GG P
Sbjct: 727 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 771
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 625 GPXXPKFFFXVXPPFXGXPXSPXXGGXXPXPPPXPXGXGFFXG 497
GP P + P G P P G P PPP P GF G
Sbjct: 741 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 919 PPPLXGGXPXPXXXXXXGXFXKXPPXP 839
PPP GG P P G F PP P
Sbjct: 761 PPPPPGGCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 41.9 bits (94), Expect = 0.001
Identities = 30/77 (38%), Positives = 31/77 (40%), Gaps = 12/77 (15%)
Frame = -1
Query: 597 GFXPLFXGXPFPPXXGGXXXX-----PPPXPGXXVFFXGGG-------GXXPKXXPPXPX 454
G P+ G P PP GG PPP PG GG G P PP P
Sbjct: 301 GLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Query: 453 GXGFFFXXKNXPPPPPP 403
G GF K PPPPPP
Sbjct: 361 G-GF----KGGPPPPPP 372
Score = 34.7 bits (76), Expect = 0.15
Identities = 22/63 (34%), Positives = 23/63 (36%), Gaps = 1/63 (1%)
Frame = -1
Query: 588 PLFXGXPFPPXXGGXXXXPPPXPGXXVFFXGGGGXXP-KXXPPXPXGXGFFFXXKNXPPP 412
P+ G P PP PPP P GG P PP P G PPP
Sbjct: 291 PITGGPPPPPGLPPITGGPPPPPPP-------GGLPPITGGPPPPPPPGGLPPISGGPPP 343
Query: 411 PPP 403
PPP
Sbjct: 344 PPP 346
Score = 31.5 bits (68), Expect = 1.4
Identities = 17/45 (37%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 446 PXPXGXGGLXX-GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXP 577
P P GGL PPPP P GG PP GG P
Sbjct: 310 PPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPP 354
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = -3
Query: 625 GPXXPKFFFXVXPPFXGXPXSPXXGGXXPXPPPXPXGXGFFXG 497
GP P + P G P P G P PPP P GF G
Sbjct: 324 GPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -3
Query: 919 PPPLXGGXPXPXXXXXXGXFXKXPPXP 839
PPP GG P P G F PP P
Sbjct: 344 PPPPPGGCPPPPPPPPPGGFKGGPPPP 370
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 33.9 bits (74), Expect = 0.26
Identities = 22/61 (36%), Positives = 23/61 (37%), Gaps = 3/61 (4%)
Frame = +1
Query: 391 FFXXGGGGGGXVFXXKKKPPXXGXRGXXFXXPXPXPPKKNPX---PXVWGGGXGXPPPXG 561
F GGGGG PP G G P P + P P GGG G P P G
Sbjct: 17 FLLPSGGGGGCGCAPPPPPPPCGCGGPSLP-PLQLPRFELPRLSLPSFGGGGCGGPAPCG 75
Query: 562 G 564
G
Sbjct: 76 G 76
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 440 KNPXPXGXGGLXXGXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNPKKKFXXX 619
+ P P G G+ PPPP + PG GG PP G P P ++
Sbjct: 306 RTPGPPGMPGMP----PPPPPSRFGPPGMGG---MPPPPPPGMRYPGGMPPPPPPRYPSA 358
Query: 620 GPKXXXXP 643
GP P
Sbjct: 359 GPGMYPPP 366
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 570 PFPPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
P PP G PPP P G P PP G PPPPPP
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---GMGGMPPPPPP 339
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNP 598
P P G+ PPPP + PG G PP G P G P
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPP 335
Score = 29.1 bits (62), Expect = 7.3
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = -1
Query: 588 PLFXGXPFPPXXG---GXXXXPPPXPGXXVFFXGGGGXXPKXXPP-XPXGXGFFFXXKNX 421
P G P PP G PPP P G P PP P G G
Sbjct: 328 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI------ 381
Query: 420 PPPPPP 403
PPPPPP
Sbjct: 382 PPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.78
Identities = 20/68 (29%), Positives = 25/68 (36%)
Frame = +2
Query: 440 KNPXPXGXGGLXXGXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNPKKKFXXX 619
+ P P G G+ PPPP + PG GG PP G P P ++
Sbjct: 316 RTPGPPGMPGMP----PPPPPSRFGPPGMGG---MPPPPPPGMRYPGGMPPPPPPRYPSA 368
Query: 620 GPKXXXXP 643
GP P
Sbjct: 369 GPGMYPPP 376
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -1
Query: 570 PFPPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
P PP G PPP P G P PP G PPPPPP
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPP---GMGGMPPPPPP 349
Score = 29.5 bits (63), Expect = 5.5
Identities = 16/51 (31%), Positives = 18/51 (35%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNP 598
P P G+ PPPP + PG G PP G P G P
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPG--MPPPPPPSRFGPPGMGGMPP 345
Score = 29.1 bits (62), Expect = 7.3
Identities = 23/66 (34%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = -1
Query: 588 PLFXGXPFPPXXG---GXXXXPPPXPGXXVFFXGGGGXXPKXXPP-XPXGXGFFFXXKNX 421
P G P PP G PPP P G P PP P G G
Sbjct: 338 PGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMI------ 391
Query: 420 PPPPPP 403
PPPPPP
Sbjct: 392 PPPPPP 397
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/53 (33%), Positives = 19/53 (35%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
PP G PPP G G + PP P G G PPPPP
Sbjct: 65 PPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPPPKGTG-------TPPPPP 110
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
PP G PPP G G G + PP P G G PPPPP
Sbjct: 34 PPPPKGTGTPPPPPTGEPQDLSGEGNAS-RRPPPPPKGTG-------TPPPPP 78
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
PP G PPP G G G + PP P G G PPPPP
Sbjct: 97 PPPPKGTGTPPPPPTGEPQDLSGEGNAS-RRPPPPPKGTG-------SPPPPP 141
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/53 (35%), Positives = 20/53 (37%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
PP G PPP G G G + PP P G G PPPPP
Sbjct: 128 PPPPKGTGSPPPPPTGEPQDLSGEGNAS-RRPPPPPKGTG-------SPPPPP 172
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 570 PFPPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
P PP G PPP G G + PP P G G PPPPP
Sbjct: 220 PPPPPKGTGSPTPPPTGEPQDL--SGEGNASRRPPPPPKGTG-------SPPPPP 265
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFPXKGGXTXKKNXGXX 620
P P G GP P P P G G G +P GE G +GG G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
Query: 621 GP 626
GP
Sbjct: 227 GP 228
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFPXKGGXTXKKNXGXX 620
P P G GP P P P G G G +P GE G +GG G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
Query: 621 GP 626
GP
Sbjct: 227 GP 228
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFPXKGGXTXKKNXGXX 620
P P G GP P P P G G G +P GE G +GG G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
Query: 621 GP 626
GP
Sbjct: 227 GP 228
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 31.5 bits (68), Expect = 1.4
Identities = 20/62 (32%), Positives = 22/62 (35%), Gaps = 2/62 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFPXKGGXTXKKNXGXX 620
P P G GP P P P G G G +P GE G +GG G
Sbjct: 167 PGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGPGEPGASEQGGPGEPGPAGPP 226
Query: 621 GP 626
GP
Sbjct: 227 GP 228
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -1
Query: 498 GGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
GGG P PP P G G F PPPPPP
Sbjct: 654 GGGSSMPMPVPP-PGGLGGFMP---PPPPPPP 681
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 552 GGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
G P P PG G GG P PP P PPPPP
Sbjct: 656 GSSMPMPVPPPG------GLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.5 bits (68), Expect = 1.4
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -1
Query: 498 GGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
GGG P PP P G G F PPPPPP
Sbjct: 654 GGGSSMPMPVPP-PGGLGGFMP---PPPPPPP 681
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 552 GGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPP 406
G P P PG G GG P PP P PPPPP
Sbjct: 656 GSSMPMPVPPPG------GLGGFMPPPPPPPPMPGDLSSLLAAAPPPPP 698
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 31.5 bits (68), Expect = 1.4
Identities = 19/58 (32%), Positives = 20/58 (34%)
Frame = +3
Query: 453 PXGXGXXFXGPXPXPPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGGXTXKKNXGXXGP 626
P G G + P P P P P G G G G P GG T G GP
Sbjct: 190 PDGEGAGYAEPGPAGPAGPPGPDGQPGAPGPD-------GQPGAGGTTSTNQPGPPGP 240
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -2
Query: 662 PPXXPFXXFXPFWAXXXXIFFXGX-PPFXXEXXFPPXGGGXPXPPPXTXGXGFFXGGXGX 486
PP P + P + + PP + PP GG PPP GG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Query: 485 GXXKXXPLXPXXGG 444
P P GG
Sbjct: 808 MYPPLIPTRPGPGG 821
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 480 GPX-PXPPXKKPXPXGXGGGXGXSPP 554
GP P PP +P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 534 PPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
PPP P P PP P G PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 656
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 541 PXPPPXPXGXGFFXGGXGXGPXXQXPXPXGXG 446
P PPP P G G G P P P G G
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 661
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -1
Query: 534 PPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
PPP P P PP P G PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPP 482
Score = 28.7 bits (61), Expect = 9.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 541 PXPPPXPXGXGFFXGGXGXGPXXQXPXPXGXG 446
P PPP P G G G P P P G G
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAG 487
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 31.1 bits (67), Expect = 1.8
Identities = 20/74 (27%), Positives = 24/74 (32%), Gaps = 1/74 (1%)
Frame = -2
Query: 662 PPXXPFXXFXPFWAXXXXIFFXGX-PPFXXEXXFPPXGGGXPXPPPXTXGXGFFXGGXGX 486
PP P + P + + PP + PP GG PPP GG G
Sbjct: 748 PPPLPMSDYRPHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRPPPGAPGGGGG 807
Query: 485 GXXKXXPLXPXXGG 444
P P GG
Sbjct: 808 MYPPLIPTRPGPGG 821
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 480 GPX-PXPPXKKPXPXGXGGGXGXSPP 554
GP P PP +P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 1.8
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 452 PXGXGGLXXGXXPPPPXKKTXXPGXGGGXXXXPP 553
P G GG G PPPP G GGG PP
Sbjct: 20 PSGGGG-GCGCAPPPPPPACGCGGGGGGYAAPPP 52
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXX--PPXPXGXGFFFXXKNXPPPPPP 403
PP G PPP G G P PP P G PPPPPP
Sbjct: 247 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 479 GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNP 598
G PPPP K P G G PP G P + G P
Sbjct: 235 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 273
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXX--PPXPXGXGFFFXXKNXPPPPPP 403
PP G PPP G G P PP P G PPPPPP
Sbjct: 268 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 479 GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNP 598
G PPPP K P G G PP G P + G P
Sbjct: 256 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 294
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.8
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Frame = -1
Query: 564 PPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXX--PPXPXGXGFFFXXKNXPPPPPP 403
PP G PPP G G P PP P G PPPPPP
Sbjct: 253 PPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
Score = 29.5 bits (63), Expect = 5.5
Identities = 15/40 (37%), Positives = 16/40 (40%)
Frame = +2
Query: 479 GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRGXNP 598
G PPPP K P G G PP G P + G P
Sbjct: 241 GSPPPPPPPKGSPPLAGSGSPPPPPAAGSP-PPPRTGSPP 279
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 480 GPX-PXPPXKKPXPXGXGGGXGXSPP 554
GP P PP +P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.4
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = +3
Query: 453 PXGXGXXFXGPXPXPPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGG 590
P G G P PP P P G GGG G + P P GG
Sbjct: 20 PSGGGGGCGCAPPPPP---PSPCGCGGGGGLALPQLPPLSLPSLGG 62
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 30.7 bits (66), Expect = 2.4
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 480 GPX-PXPPXKKPXPXGXGGGXGXSPP 554
GP P PP +P P GGG G PP
Sbjct: 786 GPGAPPPPGMRPPPGAPGGGGGMYPP 811
>Z81525-6|CAB82206.2| 346|Caenorhabditis elegans Hypothetical
protein F33A8.9 protein.
Length = 346
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/61 (29%), Positives = 22/61 (36%)
Frame = +3
Query: 444 TPXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGGXTXKKNXGXXG 623
TP P G + P P P P G GG G P G+ G + + G G
Sbjct: 221 TPGPTGPKNFYITSGPPGPPGPPGPPGNPGGIGPRGP-PGDPGIMTQDSRGVEGPSGPSG 279
Query: 624 P 626
P
Sbjct: 280 P 280
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 30.3 bits (65), Expect = 3.2
Identities = 19/60 (31%), Positives = 20/60 (33%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGGXTXKKNXGXXGP 626
P P G GP P P P G G G P G+ G GG G GP
Sbjct: 185 PGPAGSPAGPSGPGPAGPPGPAGPPGNDGQPG-QPGGPGQDGASSAGGEAGPGPAGPPGP 243
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.2
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 570 PFPPXXGGXXXXPPPXPGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
P PP PPP P G PP P F PPPPPP
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP----LFSPSMILPPPPPP 1395
>Z81138-4|CAB03474.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.6 protein.
Length = 304
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 495 PPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGG-XTXKKNXGXXGPK 629
PP KP P G G G +P G+ G P + G + G GPK
Sbjct: 147 PPPCKPCPQGPAGAPG-APGPQGDAGAPGQAGQGSGAGAPGPAGPK 191
>Z81138-3|CAB63321.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.5 protein.
Length = 304
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 495 PPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGG-XTXKKNXGXXGPK 629
PP KP P G G G +P G+ G P + G + G GPK
Sbjct: 147 PPPCKPCPQGPAGAPG-APGPQGDAGAPGQAGQGSGAGAPGPAGPK 191
>Z81138-1|CAB03475.1| 304|Caenorhabditis elegans Hypothetical
protein W05B2.1 protein.
Length = 304
Score = 29.9 bits (64), Expect = 4.2
Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 495 PPXKKPXPXGXGGGXGXSPPXXGEXGFPXKGG-XTXKKNXGXXGPK 629
PP KP P G G G +P G+ G P + G + G GPK
Sbjct: 147 PPPCKPCPQGPAGAPG-APGPQGDAGAPGQAGQGSGAGAPGPAGPK 191
>U97002-4|AAB52267.1| 630|Caenorhabditis elegans Hypothetical
protein K09H11.4 protein.
Length = 630
Score = 29.9 bits (64), Expect = 4.2
Identities = 16/41 (39%), Positives = 16/41 (39%), Gaps = 4/41 (9%)
Frame = -3
Query: 589 PPFXGXPXSPXXGGXXPXPPPXP----XGXGFFXGGXGXGP 479
PPF P P GG P P P G G F GG P
Sbjct: 395 PPFPAFPKFPSFGGFQPFQPDFPTRRFGGNGGFAGGPWNSP 435
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.9 bits (64), Expect = 4.2
Identities = 19/55 (34%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -3
Query: 613 PKFFFXVXPPFXGXPXSPXX-GGXXPXPPPXPXGXGFFXGGXGXGPXXQXPXPXG 452
P F P G P P GG P PP P G + G GP P P G
Sbjct: 386 PPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQG-GPGGFGPPPPG 439
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +2
Query: 479 GXXPPPPXKKTXXPGXGGGXXXXPPXXGGXGXPXKRG 589
G PPP G GG PP GG G P G
Sbjct: 388 GAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYG 424
Score = 29.5 bits (63), Expect = 5.5
Identities = 21/66 (31%), Positives = 23/66 (34%), Gaps = 4/66 (6%)
Frame = -1
Query: 588 PLFXGXPFPPXXGGXXXXPPPX-PGXXVFFXGGGGXXPKXXPPXPXGXGFFFXXKNXPPP 412
P G P P G PPP PG + G PP P G G + PP
Sbjct: 394 PSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
Query: 411 ---PPP 403
PPP
Sbjct: 454 VGAPPP 459
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGGXGXGPXXQXPXPXG 452
GG P PP P G GG G G P P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 29.1 bits (62), Expect = 7.3
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGGXGXGPXXQXPXPXG 452
GG P PP P G GG G G P P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>Z79694-6|CAB01958.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.6 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 484 PXPXPPKKNPXPXVWGGGXGXPPPXG 561
P P P NP GGG G P P G
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPG 175
>Z79694-5|CAB01961.1| 316|Caenorhabditis elegans Hypothetical
protein C15A11.5 protein.
Length = 316
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 484 PXPXPPKKNPXPXVWGGGXGXPPPXG 561
P P P NP GGG G P P G
Sbjct: 150 PGPKGPNGNPGAPAQGGGQGPPGPPG 175
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 7.3
Identities = 27/91 (29%), Positives = 28/91 (30%), Gaps = 4/91 (4%)
Frame = -1
Query: 663 PPXXPLXGFXXX-LGPXXXNFFXGFXPLFXGXPFPPXX---GGXXXXPPPXPGXXVFFXG 496
PP PL G G PL G P PP G PPP P +
Sbjct: 504 PPPPPLLGIAPMSTNAPPPPPMPGMAPLSTGAPTPPPPPPVGMANGGPPPPPPLPLDLLK 563
Query: 495 GGGXXPKXXPPXPXGXGFFFXXKNXPPPPPP 403
G K P P PPPPPP
Sbjct: 564 GAVAGLKSVPGGPPPP---------PPPPPP 585
>Z74472-4|CAA98942.1| 301|Caenorhabditis elegans Hypothetical
protein F23H12.4 protein.
Length = 301
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGG-----GXXXXPPXXGGXGXPXKRGXNPK 601
P P G G PP P PG G G P G G P ++G PK
Sbjct: 229 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGVDGQSGPPGPPGPAGTPGEKGICPK 285
>Z46791-4|CAA86758.1| 317|Caenorhabditis elegans Hypothetical
protein C09G5.5 protein.
Length = 317
Score = 29.1 bits (62), Expect = 7.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 484 PXPXPPKKNPXPXVWGGGXGXPPPXG 561
P P P NP GGG G P P G
Sbjct: 148 PGPQGPNGNPGAPAHGGGQGPPGPPG 173
>V00147-1|CAA23463.1| 296|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-1 coding for a collagen.
).
Length = 296
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGG-----GXXXXPPXXGGXGXPXKRGXNPK 601
P P G G PP P PG G G P G G P ++G PK
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPK 280
>J01047-1|AAA27988.1| 296|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 1 (col-1) gene, complete
cds. ).
Length = 296
Score = 29.1 bits (62), Expect = 7.3
Identities = 18/57 (31%), Positives = 20/57 (35%), Gaps = 5/57 (8%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGG-----GXXXXPPXXGGXGXPXKRGXNPK 601
P P G G PP P PG G G P G G P ++G PK
Sbjct: 224 PGPPGPPGAPGNDGPPGPPGPKGAPGPDGPPGADGQSGPPGPPGPAGTPGEKGICPK 280
>Z95621-2|CAB09131.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFP 578
P P G GP P P P P G G G P G+ G P
Sbjct: 183 PGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGGXGXG 482
GG P PPP G G GG G G
Sbjct: 50 GGCAPPPPPPACGGGCGGGGGGCG 73
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGGXGXG 482
GG P PPP G G GG G G
Sbjct: 107 GGCAPPPPPPACGGGCGGGGGGCG 130
>Z78019-9|CAB01457.1| 330|Caenorhabditis elegans Hypothetical
protein ZK863.2 protein.
Length = 330
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 2/46 (4%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXG--XSPPXXGEXGFP 578
P P G GP P P P P G G G P G+ G P
Sbjct: 183 PGPDGAPGGGSGPGPAGPAGPPGPDGNPGSAGADGQPGGPGQDGAP 228
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGG---XGXGPXXQXPXPXGXG 446
GG PPP P G G GG G G P P G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.7 bits (61), Expect = 9.6
Identities = 16/39 (41%), Positives = 16/39 (41%), Gaps = 3/39 (7%)
Frame = -3
Query: 553 GGXXPXPPPXPXGXGFFXGG---XGXGPXXQXPXPXGXG 446
GG PPP P G G GG G G P P G G
Sbjct: 44 GGGGCAPPPAPCGGGCGGGGGGCGGGGGCAPPPAPCGGG 82
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 484 PXPXPPKKNPXPXVWGGGXGXPPPXG 561
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/50 (34%), Positives = 17/50 (34%), Gaps = 2/50 (4%)
Frame = +2
Query: 446 PXPXGXGGLXXGXXPPPPXKKTXXPGXGG--GXXXXPPXXGGXGXPXKRG 589
P P G G PP P K PG G G P G G P G
Sbjct: 224 PGPPGPPGPPGPQGPPGPPGKDGQPGKAGPPGLPGDPGEKGSDGLPGPHG 273
>U53155-5|AAC48270.1| 303|Caenorhabditis elegans Collagen protein
43 protein.
Length = 303
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGG--GXGXSPPXXGEXGFPXKGGXTXK 602
P P G P P P P P G G G P G+ G P + G K
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKGICPK 287
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 596 GXPPFXXEXXFPPXGGGXPXPPPXTXGXGFFXGGXGXG 483
G PP PP GG PPP G G G G G
Sbjct: 181 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 218
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 596 GXPPFXXEXXFPPXGGGXPXPPPXTXGXGFFXGGXGXG 483
G PP PP GG PPP G G G G G
Sbjct: 461 GGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPGGPGGPG 498
>AF067607-9|AAF98609.1| 460|Caenorhabditis elegans Collagen protein
102 protein.
Length = 460
Score = 28.7 bits (61), Expect = 9.6
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGGGXGXSPPXXGEXG 572
P P G GP P P P P G G G +P G+ G
Sbjct: 220 PGPNGEAGAGSGPGPEGPAGPPGPNGKDGEAG-APGKDGDAG 260
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.7 bits (61), Expect = 9.6
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +1
Query: 484 PXPXPPKKNPXPXVWGGGXGXPPPXG 561
P P PP P P GG PPP G
Sbjct: 771 PPPPPPSAIPLPPRLQGGIPPPPPLG 796
>AB072926-1|BAB69889.1| 303|Caenorhabditis elegans collagen
protein.
Length = 303
Score = 28.7 bits (61), Expect = 9.6
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 2/54 (3%)
Frame = +3
Query: 447 PXPXGXGXXFXGPXPXPPXKKPXPXGXGG--GXGXSPPXXGEXGFPXKGGXTXK 602
P P G P P P P P G G G P G+ G P + G K
Sbjct: 234 PGPPGAPGNDGPPGPPGPKGSPGPDGPAGVDGQAGPPGPPGQAGTPGEKGICPK 287
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.153 0.522
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,643,356
Number of Sequences: 27780
Number of extensions: 411206
Number of successful extensions: 2578
Number of sequences better than 10.0: 55
Number of HSP's better than 10.0 without gapping: 650
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
- SilkBase 1999-2023 -