Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_J18.2
(1285 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 37 0.030
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 36 0.091
01_01_0715 - 5542648-5543219,5543352-5543544 33 0.49
03_02_0455 - 8630543-8630893,8630994-8631068,8631149-8631223,863... 32 0.85
02_05_0686 - 30900748-30902167,30903442-30904742 32 0.85
04_03_1022 - 21778315-21779007 31 1.5
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 2.0
03_01_0515 - 3864796-3865425 31 2.6
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 30 3.4
07_01_0674 + 5047503-5047646,5047808-5047901,5048743-5048828,504... 30 3.4
12_02_1174 - 26696869-26698191 30 4.5
01_07_0021 - 40533864-40534583,40534779-40534814,40534909-405350... 29 7.9
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 37.1 bits (82), Expect = 0.030
Identities = 21/59 (35%), Positives = 21/59 (35%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
G P PP P PPP P G G GP P P P P P PP P
Sbjct: 319 GAPPPPPAHPAAPAPPPPAPSPSA--AGAGSGPPPPPPPAAPAAP--RPPGPGPGPPPP 373
Score = 31.1 bits (67), Expect = 2.0
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
P PP P P P P G P P P G G P PPP P
Sbjct: 273 PAAPPPPAGPPPPAPPPLPPS-HHHHHGHHPPPPHPLPPGAGAGAGTGAPPPPPAHP 328
Score = 29.9 bits (64), Expect = 4.5
Identities = 20/76 (26%), Positives = 21/76 (27%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAX 804
PPP P +P G PP PP P P P G G
Sbjct: 322 PPPPAHPAAPAPPPPAPSPSAAGAGSGPPPPPPPAAPAAPRPP-----------GPGPGP 370
Query: 805 XXPXXXVSXSGXGXPP 852
P G G PP
Sbjct: 371 PPPPGAAGRGGGGPPP 386
Score = 29.5 bits (63), Expect = 6.0
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P PP P PP GP G G G P P G P PPP
Sbjct: 351 PPPPPAAPAAPRPPGPGPGPPPPPGAAGRGGGGPPPPALPGG----PRARGPPP 400
Score = 29.1 bits (62), Expect = 7.9
Identities = 17/45 (37%), Positives = 17/45 (37%)
Frame = -1
Query: 481 PPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
PPP PG G G G P P P P PPPP P
Sbjct: 303 PPPHPLPPGAGAGA-GTGAPPPPPAH--------PAAPAPPPPAP 338
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 35.5 bits (78), Expect = 0.091
Identities = 33/125 (26%), Positives = 36/125 (28%), Gaps = 4/125 (3%)
Frame = +1
Query: 613 FXXAPPPXKXXKXSXPXXXGXNPXGIXKXPGXPP----GNPPXXPXXPXPAVNXKXXXFS 780
+ APPP + P P GI P PP G P P P
Sbjct: 1095 YGVAPPPPSIGAGAPPPPPP--PGGITGVPPPPPIGGLGGHQAPPAPPLPEGIGGVPPPP 1152
Query: 781 PLGXGGAXXXPXXXVSXSGXGXPPQXGGGXKXPXXXQRGXXXGXKXVXXPPRXKKNXXPX 960
P+G G P G PP GG P RG G PP P
Sbjct: 1153 PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAPPPPPPRG-HGGVGGPPTPPGAPAPPMPP 1211
Query: 961 GXXPG 975
G G
Sbjct: 1212 GVPGG 1216
>01_01_0715 - 5542648-5543219,5543352-5543544
Length = 254
Score = 33.1 bits (72), Expect = 0.49
Identities = 18/57 (31%), Positives = 18/57 (31%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
P PP P P P P G P P P G P PPPP P
Sbjct: 145 PPPPPTVPAAPTPRPSPPPPAAGTNGTARAPSPPVPAPAPAG------SPPPPPPPP 195
>03_02_0455 -
8630543-8630893,8630994-8631068,8631149-8631223,
8631332-8631397,8631891-8631967,8632659-8633070
Length = 351
Score = 32.3 bits (70), Expect = 0.85
Identities = 20/61 (32%), Positives = 23/61 (37%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P G P PP P PPP+ P G P+ P P G +P PPP
Sbjct: 258 PNGSGGPPRPPPPQVPP-PPPQAPPPPPPNAPMGMPPRIPPPPVGG-------TQPPPPP 309
Query: 355 P 353
P
Sbjct: 310 P 310
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 32.3 bits (70), Expect = 0.85
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
PP P PPP GP G P P P G P PPPP
Sbjct: 337 PPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGG------PPPPPP 382
Score = 31.9 bits (69), Expect = 1.1
Identities = 21/66 (31%), Positives = 22/66 (33%), Gaps = 2/66 (3%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAV--NXKXXXFSPLGXG 795
APPP K + P P G PP PP P P P K P G
Sbjct: 325 APPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKG 384
Query: 796 GAXXXP 813
GA P
Sbjct: 385 GASRPP 390
Score = 29.5 bits (63), Expect = 6.0
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXKX 338
P PP PPP GP P P G P P PPPP P
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAK-GPPPPPPPKGPSPPPPPPPGG 372
Query: 337 K 335
K
Sbjct: 373 K 373
Score = 29.1 bits (62), Expect = 7.9
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXG--PGVXXGGXGXGPQXPXP 410
G P PP P PPP+ P GG GP P P
Sbjct: 343 GPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPP 382
>04_03_1022 - 21778315-21779007
Length = 230
Score = 31.5 bits (68), Expect = 1.5
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P PP PP P GG G P P ++ P PPP
Sbjct: 83 PYIPPHHPHHHHPPTPAPAPSTTPGGHGGVPPYYPPPPVTPTPYYYPSPAPPPP 136
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 2.0
Identities = 14/47 (29%), Positives = 15/47 (31%)
Frame = -1
Query: 487 PXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
P PPP P + P P P P PPPP P
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPP 610
Score = 30.7 bits (66), Expect = 2.6
Identities = 16/59 (27%), Positives = 18/59 (30%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXK 341
P P P PPP P + P P P P P PPP P +
Sbjct: 590 PPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNR 648
Score = 30.3 bits (65), Expect = 3.4
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = -1
Query: 427 PQXPXPXXXGXGXFFXPXKPXPPPPXP 347
P P P G F P P PPPP P
Sbjct: 547 PPPPPPPPSGNKPAFSPPPPPPPPPPP 573
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.7 bits (66), Expect = 2.6
Identities = 18/56 (32%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGX--GXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
PP PPP P V GP P P P P PPPP P
Sbjct: 39 PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPP 94
Score = 29.1 bits (62), Expect = 7.9
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXK 341
PP P PP P V P P P P P PPPP P K
Sbjct: 61 PPPPAAGPLMPPPPPPPSVT-SSPPPPPLPPPPPPPAASP--PPPPPSPPPPSPVK 113
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 30.3 bits (65), Expect = 3.4
Identities = 21/68 (30%), Positives = 21/68 (30%), Gaps = 5/68 (7%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGP-----QXPXPXXXGXGXFFXPXK 371
P F P PP P P GPG P Q P P P
Sbjct: 49 PPFLAPPPPPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPP 108
Query: 370 PXPPPPXP 347
P PPPP P
Sbjct: 109 PPPPPPSP 116
>07_01_0674 +
5047503-5047646,5047808-5047901,5048743-5048828,
5049380-5049429,5049517-5049586,5049668-5049749,
5049867-5050267,5050414-5050941,5051823-5052044
Length = 558
Score = 30.3 bits (65), Expect = 3.4
Identities = 17/65 (26%), Positives = 21/65 (32%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXKX 338
P PP P P+ PGV P P G P P PP P +
Sbjct: 358 PPLPPRPPTMPSMQPDMLAPGVPRFPPPPPPPDTRPPFMAPGVNARPLPPPPPGLPPAQM 417
Query: 337 KXSXF 323
+ + F
Sbjct: 418 QMAPF 422
Score = 29.5 bits (63), Expect = 6.0
Identities = 17/63 (26%), Positives = 18/63 (28%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P P PP P P PG+ P P P G P P P P
Sbjct: 221 PSAASLPPLPPPPPPPPKPANIAGAPGLPLPPPPPPPPGPPPREIVPGQTLLPPPPPPRP 280
Query: 355 PXP 347
P
Sbjct: 281 LQP 283
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.9 bits (64), Expect = 4.5
Identities = 19/65 (29%), Positives = 20/65 (30%), Gaps = 2/65 (3%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXF--FXPXKPXP 362
P+ P PP P P PG PQ P P KP P
Sbjct: 208 PKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQPPPPPPRAPVKMPRVLEPKPSP 267
Query: 361 PPPXP 347
PPP P
Sbjct: 268 PPPSP 272
>01_07_0021 -
40533864-40534583,40534779-40534814,40534909-40535048,
40535837-40535922,40536430-40536653,40536770-40536865,
40538766-40538833,40539945-40540055,40540799-40540955
Length = 545
Score = 29.1 bits (62), Expect = 7.9
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -1
Query: 529 FXGXPXFPPXXXXXPX-PPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
+ P FPP PPP P G G G F+ P P PPPP
Sbjct: 489 YNSYPVFPPMNYPMVNIPPPFPSAPNTPPGFQGLA-----------GPFYGPPYPAPPPP 537
Query: 352 XP 347
P
Sbjct: 538 PP 539
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.315 0.149 0.502
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,811,920
Number of Sequences: 37544
Number of extensions: 339700
Number of successful extensions: 1365
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1246
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3992400636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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