Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J18.2
         (1285 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   3.6  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    25   6.3  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 3/48 (6%)
 Frame = -1

Query: 487 PXPPPEXXGPGVXXGGXGXGP---QXPXPXXXGXGXFFXPXKPXPPPP 353
           P PPP    P    GG   GP   + P P   G G    P     P P
Sbjct: 586 PPPPPMGPPPSPLAGGPLGGPAGSRPPLPNLLGFGGAAPPVTILVPYP 633



 Score = 25.0 bits (52), Expect = 4.8
 Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 2/60 (3%)
 Frame = +1

Query: 679 PXGIXKXPGX--PPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAXXXPXXXVSXSGXGXPP 852
           P G    P    PP  PP  P  P P+         PLG       P   +   G   PP
Sbjct: 570 PAGFPNLPNAQPPPAPPPPPPMGPPPS----PLAGGPLGGPAGSRPPLPNLLGFGGAAPP 625


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.6 bits (51), Expect = 6.3
 Identities = 16/61 (26%), Positives = 20/61 (32%)
 Frame = -2

Query: 615 EKPPQPALFRXXALXWPFXXXXFXGXXPXFXGNPXSPLXXXXXPXPXXKXXGXGXXGGGX 436
           E  PQPA++      +             F   P + L     P P     G G  GGG 
Sbjct: 46  ESSPQPAMYYPHPHVFHPQSSPDWSSHENFSTPPQTSLGLSHGPSPGAGGTGSGGSGGGS 105

Query: 435 G 433
           G
Sbjct: 106 G 106


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.149    0.502 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 619,243
Number of Sequences: 2352
Number of extensions: 7321
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 147557667
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)