Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_J18.2
(1285 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 36 0.062
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 33 0.33
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 33 0.33
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 33 0.58
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 32 0.76
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 32 0.76
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 31 1.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 31 1.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 31 1.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.3
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 2.3
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 2.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 2.3
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 2.3
Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical pr... 30 3.1
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 3.1
Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical pr... 30 4.1
V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein ( Caeno... 30 4.1
J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein ( C.ele... 30 4.1
AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen stru... 30 4.1
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 30 4.1
U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequen... 29 5.4
AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical ... 29 7.1
Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical pr... 29 9.4
Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical pr... 29 9.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 29 9.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 29 9.4
AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical... 29 9.4
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 35.9 bits (79), Expect = 0.062
Identities = 30/107 (28%), Positives = 34/107 (31%), Gaps = 3/107 (2%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGX---PPGNPPXXPXXPXPAVNXKXXXFSPLGX 792
APPP + S P G P + PG PP + P P P+ P G
Sbjct: 350 APPPQQFHAPS-PQSFGGPPPPVSSAPGNFAPPPQSGPPGAFAPPPSAFGAPQ--GPGGP 406
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
GG P G PPQ G G P G PP
Sbjct: 407 GGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYGPPPTGFPP 453
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
G P P P PPP G+ P P P G P PPPP P
Sbjct: 599 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 33.5 bits (73), Expect = 0.33
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
G P P P PPP G+ P P P G P PPPP P
Sbjct: 425 GTPENRPHAVPPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 32.7 bits (71), Expect = 0.58
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGX--GXFFXPXKPXPPPPXP 347
P P P PPP G+ GG P P G G P P PPPP P
Sbjct: 526 PGMAPLSTGAPTPPPPPP-VGMANGGPPPPPPLPLDLLKGAVAGLKSVPGGPPPPPPPP 583
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPP-GNPPXXPXXPXPAVNXKXXXFSPLGXGGA 801
PPP P G+ P PP G P P P F P G GG
Sbjct: 274 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 333
Query: 802 XXXPXXXVSXSGXGXPP 852
P + G PP
Sbjct: 334 PPPPPPGMRYPGGMPPP 350
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
P PP PPP PG G G P P G P PPPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 339
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXX------GGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P PP P PPP PG+ P P P G P P PPP
Sbjct: 262 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Query: 355 P 353
P
Sbjct: 322 P 322
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
PP P PPP PG+ G P P G G + P PP P
Sbjct: 327 PPGMGGMPPPPP----PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
P P P PPP GP G G P P P G + P PPPP
Sbjct: 308 PGPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPP-----GMRYPGGMPPPPPP 353
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.3 bits (70), Expect = 0.76
Identities = 21/77 (27%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPP-GNPPXXPXXPXPAVNXKXXXFSPLGXGGA 801
PPP P G+ P PP G P P P F P G GG
Sbjct: 284 PPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGM 343
Query: 802 XXXPXXXVSXSGXGXPP 852
P + G PP
Sbjct: 344 PPPPPPGMRYPGGMPPP 360
Score = 31.9 bits (69), Expect = 1.0
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
P PP PPP PG G G P P G P PPPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPP 349
Score = 29.9 bits (64), Expect = 4.1
Identities = 19/61 (31%), Positives = 20/61 (32%), Gaps = 6/61 (9%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXX------GGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P PP P PPP PG+ P P P G P P PPP
Sbjct: 272 PVPPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Query: 355 P 353
P
Sbjct: 332 P 332
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/52 (32%), Positives = 19/52 (36%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
PP P PPP PG+ G P P G G + P PP P
Sbjct: 337 PPGMGGMPPPPP----PGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 28.7 bits (61), Expect = 9.4
Identities = 19/55 (34%), Positives = 20/55 (36%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
P P P PPP GP G G P P P G + P PPPP
Sbjct: 318 PGPPGMPGMPPPPPPSRFGPP----GMGGMPPPPPP-----GMRYPGGMPPPPPP 363
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKP--XPPPPXP 347
P PP P PPP P + G P P G G P P PPPP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P G P PP PP PG G P P P G P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 764
Query: 355 P 353
P
Sbjct: 765 P 765
Score = 28.7 bits (61), Expect = 9.4
Identities = 25/106 (23%), Positives = 28/106 (26%), Gaps = 3/106 (2%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAX 804
PPP K S P + G PP P P P P+ G
Sbjct: 686 PPPTKM-NLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Query: 805 XXPXXXVSXSGXG---XPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
P + G PP GG P G G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKP--XPPPPXP 347
P PP P PPP P + G P P G G P P PPPP P
Sbjct: 717 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPP 774
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P G P PP PP PG G P P P G P PPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 764
Query: 355 P 353
P
Sbjct: 765 P 765
Score = 28.7 bits (61), Expect = 9.4
Identities = 25/106 (23%), Positives = 28/106 (26%), Gaps = 3/106 (2%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAX 804
PPP K S P + G PP P P P P+ G
Sbjct: 686 PPPTKM-NLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 744
Query: 805 XXPXXXVSXSGXG---XPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
P + G PP GG P G G PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.5 bits (68), Expect = 1.3
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 2/59 (3%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKP--XPPPPXP 347
P PP P PPP P + G P P G G P P PPPP P
Sbjct: 300 PGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISG-GPPPPPPPPGGCPPPPPP 357
Score = 29.1 bits (62), Expect = 7.1
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -1
Query: 535 PRFXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPP 356
P G P PP PP PG G P P P G P PPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPP--PPPPPGGLPPISGGPPPPPPP 347
Query: 355 P 353
P
Sbjct: 348 P 348
Score = 28.7 bits (61), Expect = 9.4
Identities = 25/106 (23%), Positives = 28/106 (26%), Gaps = 3/106 (2%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAX 804
PPP K S P + G PP P P P P+ G
Sbjct: 269 PPPTKM-NLSAPSTSAGGSSALPPITGGPPPPPGLPPITGGPPPPPPPGGLPPITGGPPP 327
Query: 805 XXPXXXVSXSGXG---XPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
P + G PP GG P G G PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 529 FXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
F G PP P PPP+ P G P P G P PPPP
Sbjct: 225 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 283
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGXPP---GNPPXXPXXPXPAVNXKXXXFSPLGX 792
+PPP K S P +P PP G+PP P P P
Sbjct: 236 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 295
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGG 864
P +G PPQ GG
Sbjct: 296 SPPPPPPPRGSPPTGSLPPPQAGG 319
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 909 PXXGPPLGXXGGFXTPPXLGXXXXPRXGXXPXGVXXSAPXSQRG 778
P PPL G PP G PR G P S P G
Sbjct: 243 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 286
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 529 FXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
F G PP P PPP+ P G P P G P PPPP
Sbjct: 246 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 304
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGXPP---GNPPXXPXXPXPAVNXKXXXFSPLGX 792
+PPP K S P +P PP G+PP P P P
Sbjct: 257 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 316
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGG 864
P +G PPQ GG
Sbjct: 317 SPPPPPPPRGSPPTGSLPPPQAGG 340
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 909 PXXGPPLGXXGGFXTPPXLGXXXXPRXGXXPXGVXXSAPXSQRG 778
P PPL G PP G PR G P S P G
Sbjct: 264 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 307
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.5 bits (68), Expect = 1.3
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = -1
Query: 529 FXGXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPP 353
F G PP P PPP+ P G P P G P PPPP
Sbjct: 231 FRGKRQAPPAGSPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPP 289
Score = 30.3 bits (65), Expect = 3.1
Identities = 22/84 (26%), Positives = 26/84 (30%), Gaps = 3/84 (3%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGXPP---GNPPXXPXXPXPAVNXKXXXFSPLGX 792
+PPP K S P +P PP G+PP P P P
Sbjct: 242 SPPPPPPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAG 301
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGG 864
P +G PPQ GG
Sbjct: 302 SPPPPPPPRGSPPTGSLPPPQAGG 325
Score = 29.1 bits (62), Expect = 7.1
Identities = 15/44 (34%), Positives = 15/44 (34%)
Frame = -2
Query: 909 PXXGPPLGXXGGFXTPPXLGXXXXPRXGXXPXGVXXSAPXSQRG 778
P PPL G PP G PR G P S P G
Sbjct: 249 PKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPPTGSPPPPPAG 292
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 30.7 bits (66), Expect = 2.3
Identities = 30/107 (28%), Positives = 34/107 (31%), Gaps = 5/107 (4%)
Frame = +1
Query: 628 PPXKXXKXSXPXXXGXNPXG--IXKXPGXPPGNPPXX-PXXPXPAVNXKXXXFSP--LGX 792
PP P NP G + PG P G PP P P P +G
Sbjct: 101 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 160
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
GG P G G PP GG P +G G + PP
Sbjct: 161 GGDPRGPP-----GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 202
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 30.7 bits (66), Expect = 2.3
Identities = 30/107 (28%), Positives = 34/107 (31%), Gaps = 5/107 (4%)
Frame = +1
Query: 628 PPXKXXKXSXPXXXGXNPXG--IXKXPGXPPGNPPXX-PXXPXPAVNXKXXXFSP--LGX 792
PP P NP G + PG P G PP P P P +G
Sbjct: 381 PPPGMPGGVPPQAQPFNPHGGSMFGGPGGPGGPPPFGQPFQQAPQGMFNVPTGPPPLMGG 440
Query: 793 GGAXXXPXXXVSXSGXGXPPQXGGGXKXPXXXQRGXXXGXKXVXXPP 933
GG P G G PP GG P +G G + PP
Sbjct: 441 GGDPRGPP-----GGMGGPPGHGGMGGPPGHGGQGGPPGHGGMGGPP 482
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 457 GVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
G G G P P G G F P P PPPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPP--PPPPPPMP 683
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 457 GVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPPPPXP 347
G G G P P G G F P P PPPP P
Sbjct: 649 GWYGSGGGSSMPMPVPPPGGLGGFMPP--PPPPPPMP 683
>Z68215-7|CAA92453.1| 289|Caenorhabditis elegans Hypothetical
protein C53B4.5 protein.
Length = 289
Score = 30.3 bits (65), Expect = 3.1
Identities = 28/92 (30%), Positives = 30/92 (32%), Gaps = 1/92 (1%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGX-NPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGA 801
PPP K P G P G K P PPG P P P K P G GG
Sbjct: 132 PPPCKPCPEGPPGPAGPPGPQG-NKGPLGPPG--PPGPEGPNGTAGNKGPA-GPPGPGG- 186
Query: 802 XXXPXXXVSXSGXGXPPQXGGGXKXPXXXQRG 897
P +G PQ G + Q G
Sbjct: 187 KPGPAGPPGENGRNGEPQPGSPGEPGRPGQPG 218
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 3.1
Identities = 19/62 (30%), Positives = 21/62 (33%), Gaps = 1/62 (1%)
Frame = -1
Query: 517 PXFPPXXXXXPXPPPEXXGPGVXXGGXGXG-PQXPXPXXXGXGXFFXPXKPXPPPPXPXK 341
P PP P PPP P + G P P P P PPPP P +
Sbjct: 1344 PPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPPLFSPSMIL----PPPPPPLPSE 1399
Query: 340 XK 335
K
Sbjct: 1400 EK 1401
>Z68301-5|CAA92620.1| 301|Caenorhabditis elegans Hypothetical
protein W01B6.7 protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPP 359
G P P P PP PG G G GP P G P P P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>V00148-1|CAA23464.1| 301|Caenorhabditis elegans protein (
Caenorhabditis elegansgene Col-2 coding for a collagen.
).
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPP 359
G P P P PP PG G G GP P G P P P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>J01048-1|AAA27990.1| 301|Caenorhabditis elegans protein (
C.elegans (nematode)collagen 2 (col-2) gene, complete
cds. ).
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPP 359
G P P P PP PG G G GP P G P P P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>AY347575-1|AAP97869.1| 301|Caenorhabditis elegans COLlagen
structural gene, probabledorsal and ventral cuticle
component, from embryo to adult,but maximal in dauer
(28.0 kD) (col-2) protein.
Length = 301
Score = 29.9 bits (64), Expect = 4.1
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = -1
Query: 523 GXPXFPPXXXXXPXPPPEXXGPGVXXGGXGXGPQXPXPXXXGXGXFFXPXKPXPP 359
G P P P PP PG G G GP P G P P P
Sbjct: 152 GGPPGPAGPAGPPGPPGPDGNPGSPAGPSGPGPAGPPGPAGPAGNDGAPGAPGGP 206
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.9 bits (64), Expect = 4.1
Identities = 24/79 (30%), Positives = 26/79 (32%), Gaps = 2/79 (2%)
Frame = +1
Query: 622 APPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGA 801
AP P S P G P K P P G P P PAVN + P G
Sbjct: 544 APAPAPQPSPSSPVY-GPTPSEPAK-PSMPSGESPAQPEPSIPAVNPEPSPSQPSSSGPI 601
Query: 802 XXXPXXXVSXSG--XGXPP 852
P S + G PP
Sbjct: 602 QTAPPSPSSPNAIPEGPPP 620
>U41557-6|AAA83307.1| 589|Caenorhabditis elegans Collagen sequence
x-hybridizingprotein 1 protein.
Length = 589
Score = 29.5 bits (63), Expect = 5.4
Identities = 30/95 (31%), Positives = 32/95 (33%), Gaps = 7/95 (7%)
Frame = -2
Query: 933 GGXXNXFXPXXGPPLGXXGGFXTPPXLGXXXXPRXGXXPXGVXXSAPXSQRGKXGXFSVN 754
GG F P PP G G P P P G AP S G G F+ +
Sbjct: 149 GGPPGPFDPSGAPPSGGPPGLFDPSGAPPSGGPPGPFGPSG----APPS-GGPPGPFNPS 203
Query: 753 XXXGXXG-----XPXGV--SGGXPXXFXNPXGVXP 670
G P G SGG P F NP G P
Sbjct: 204 EAPPSGGPTGPFDPSGAPPSGGPPGPF-NPSGAPP 237
Score = 28.7 bits (61), Expect = 9.4
Identities = 27/91 (29%), Positives = 27/91 (29%), Gaps = 3/91 (3%)
Frame = -2
Query: 933 GGXXNXFXPXXGPPLGXXGGFXTPPXLGXXXXPRXGXXPXGVXXS-APXSQRGKXGXFSV 757
GG F P PP G G P P P G S P G
Sbjct: 389 GGPPGPFDPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPSGGPPGPFNPSGAPPS 448
Query: 756 NXXXGXXGXPXGV--SGGXPXXFXNPXGVXP 670
G P G SGG P F NP G P
Sbjct: 449 GGPPGPFN-PSGAPPSGGPPGPF-NPSGAPP 477
>AL022716-5|CAB97232.1| 291|Caenorhabditis elegans Hypothetical
protein C24F3.6 protein.
Length = 291
Score = 29.1 bits (62), Expect = 7.1
Identities = 26/91 (28%), Positives = 28/91 (30%)
Frame = +1
Query: 625 PPPXKXXKXSXPXXXGXNPXGIXKXPGXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAX 804
PPP K P G K P PPG P P P K P G GG
Sbjct: 134 PPPCKPCPEGPPGPAGPPGPDGNKGPLGPPG--PPGPEGPNGEPGNKGPA-GPPGPGG-K 189
Query: 805 XXPXXXVSXSGXGXPPQXGGGXKXPXXXQRG 897
P +G PQ G + Q G
Sbjct: 190 PGPAGPPGENGNNGEPQPGAPGEPGQPGQPG 220
>Z83241-3|CAB05818.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 734 GXXGGFPGGXPGXFXIPXGF 675
G GG PGG PG +P GF
Sbjct: 285 GFPGGMPGGFPGAGGMPGGF 304
>Z81120-9|CAB03349.1| 422|Caenorhabditis elegans Hypothetical
protein T12D8.8 protein.
Length = 422
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 734 GXXGGFPGGXPGXFXIPXGF 675
G GG PGG PG +P GF
Sbjct: 285 GFPGGMPGGFPGAGGMPGGF 304
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGX----GXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXK 341
PP P P E P + G P P KP PPPP P +
Sbjct: 121 PPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQ 180
Query: 340 XKXS 329
K S
Sbjct: 181 QKPS 184
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.7 bits (61), Expect = 9.4
Identities = 18/64 (28%), Positives = 20/64 (31%), Gaps = 4/64 (6%)
Frame = -1
Query: 508 PPXXXXXPXPPPEXXGPGVXXGGX----GXGPQXPXPXXXGXGXFFXPXKPXPPPPXPXK 341
PP P P E P + G P P KP PPPP P +
Sbjct: 121 PPVPPPAPVPAVEGKKPSIVSSSSFSHHGATSSAPPPPPPPPPVSVPSSKPTPPPPPPAQ 180
Query: 340 XKXS 329
K S
Sbjct: 181 QKPS 184
>AL032627-19|CAD66222.1| 309|Caenorhabditis elegans Hypothetical
protein Y41C4A.16 protein.
Length = 309
Score = 28.7 bits (61), Expect = 9.4
Identities = 16/54 (29%), Positives = 18/54 (33%)
Frame = +1
Query: 703 GXPPGNPPXXPXXPXPAVNXKXXXFSPLGXGGAXXXPXXXVSXSGXGXPPQXGG 864
G PGNP P P + P G GA P + G P GG
Sbjct: 133 GGLPGNPGRPPAQPCHPITPPPCRPCPQGPPGAPGSPGPQGNAGAPGQPGHGGG 186
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.315 0.149 0.502
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,225,338
Number of Sequences: 27780
Number of extensions: 240828
Number of successful extensions: 918
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 812
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3589453552
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
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