Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J17.2
         (1275 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    26   2.7  
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    25   6.2  
AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger transc...    24   8.2  

>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 25.8 bits (54), Expect = 2.7
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = +2

Query: 290 RHNRPAVYTIAQHRSHKYRSSRGHHEHP 373
           +  +P+ Y   QH  H       HH HP
Sbjct: 165 QQQQPSSYHQQQHPGHSQHHHHHHHHHP 192


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
           channel alpha1 subunit protein.
          Length = 1893

 Score = 24.6 bits (51), Expect = 6.2
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = -2

Query: 578 YLDQFSVYKNAN*VAMFTLELPL 510
           +LD F  Y N   VA+FT+E+ L
Sbjct: 512 WLDDFQEYTNMFFVALFTMEMLL 534


>AF395080-1|AAK97462.1|  537|Anopheles gambiae zinc finger
           transcription factor pannier protein.
          Length = 537

 Score = 24.2 bits (50), Expect = 8.2
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +2

Query: 326 HRSHKYRSSRGHHEHPDTVPPAG 394
           H +H +     HH HP     AG
Sbjct: 498 HHAHPHHHHHHHHHHPTAADLAG 520


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,061,713
Number of Sequences: 2352
Number of extensions: 21142
Number of successful extensions: 39
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 146331426
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)