Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J05.2
         (1670 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0316 + 2361904-2362237,2362454-2363178                           30   4.7  

>11_01_0316 + 2361904-2362237,2362454-2363178
          Length = 352

 Score = 30.3 bits (65), Expect = 4.7
 Identities = 16/39 (41%), Positives = 18/39 (46%)
 Frame = +3

Query: 666 KPXPPLXNXKNELXESXGNGRXGEIPRQPGKXKXPETEK 782
           KP P     K E  E+ G G+  E    PGK K  E EK
Sbjct: 27  KPKPAGKGGKPEKGETPGKGKPEERETPPGKGKPEEKEK 65


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.315    0.143    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,772,646
Number of Sequences: 37544
Number of extensions: 211589
Number of successful extensions: 149
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 104
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 113
length of database: 14,793,348
effective HSP length: 86
effective length of database: 11,564,564
effective search space used: 5435345080
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)