Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_J04.2
         (1247 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p pro...    97   6e-20
AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-P...    97   6e-20
AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-P...    97   6e-20
AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p pro...    95   2e-19

>AY071208-1|AAL48830.1|  111|Drosophila melanogaster RE25263p
           protein.
          Length = 111

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 55/111 (49%), Positives = 62/111 (55%)
 Frame = +1

Query: 94  LVAAXPXXXPLASXHSRLAWVLPSGXSGFGSXXTLXXLRXGXAXLVLIAXNAPPLRXXXX 273
           +VA       L S ++RLA V+ SG    G   TL  LR G A LVLIA N P LR    
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 274 XXXXXXXKPGVHHXSGXNIELGTACGKXYXVCTLAITXPGXSDIITTLPEA 426
                  K  V H SG NIELGTACGK + VCTL+IT PG SDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AE014134-3014|AAN11021.1|  111|Drosophila melanogaster CG10652-PB,
           isoform B protein.
          Length = 111

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 55/111 (49%), Positives = 62/111 (55%)
 Frame = +1

Query: 94  LVAAXPXXXPLASXHSRLAWVLPSGXSGFGSXXTLXXLRXGXAXLVLIAXNAPPLRXXXX 273
           +VA       L S ++RLA V+ SG    G   TL  LR G A LVLIA N P LR    
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 274 XXXXXXXKPGVHHXSGXNIELGTACGKXYXVCTLAITXPGXSDIITTLPEA 426
                  K  V H SG NIELGTACGK + VCTL+IT PG SDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AE014134-3013|AAF53738.1|  111|Drosophila melanogaster CG10652-PA,
           isoform A protein.
          Length = 111

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 55/111 (49%), Positives = 62/111 (55%)
 Frame = +1

Query: 94  LVAAXPXXXPLASXHSRLAWVLPSGXSGFGSXXTLXXLRXGXAXLVLIAXNAPPLRXXXX 273
           +VA       L S ++RLA V+ SG    G   TL  LR G A LVLIA N P LR    
Sbjct: 1   MVAVKKQKKALESTNARLALVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 274 XXXXXXXKPGVHHXSGXNIELGTACGKXYXVCTLAITXPGXSDIITTLPEA 426
                  K  V H SG NIELGTACGK + VCTL+IT PG SDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


>AY118425-1|AAM48454.1|  111|Drosophila melanogaster RH09938p
           protein.
          Length = 111

 Score = 94.7 bits (225), Expect = 2e-19
 Identities = 54/111 (48%), Positives = 61/111 (54%)
 Frame = +1

Query: 94  LVAAXPXXXPLASXHSRLAWVLPSGXSGFGSXXTLXXLRXGXAXLVLIAXNAPPLRXXXX 273
           +VA       L S ++RL  V+ SG    G   TL  LR G A LVLIA N P LR    
Sbjct: 1   MVAVKKQKKALESTNARLELVMKSGKYCLGYKQTLKTLRQGKAKLVLIASNTPALRKSEI 60

Query: 274 XXXXXXXKPGVHHXSGXNIELGTACGKXYXVCTLAITXPGXSDIITTLPEA 426
                  K  V H SG NIELGTACGK + VCTL+IT PG SDII +L  A
Sbjct: 61  EYYAMLAKTEVQHYSGTNIELGTACGKYFRVCTLSITDPGDSDIIRSLETA 111


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,633,240
Number of Sequences: 53049
Number of extensions: 408467
Number of successful extensions: 540
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 532
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 540
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6682378440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)