Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_I18.2
(1302 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces ... 85 2e-17
SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces pom... 55 4e-13
SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|c... 55 2e-08
SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2 |Sc... 38 0.004
SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyc... 28 2.5
SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces pomb... 28 3.3
SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate transa... 27 5.7
SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomy... 27 7.5
SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase Mde10|S... 26 9.9
>SPCC1223.06 |tea1|alp8|cell end marker Tea1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1147
Score = 85.0 bits (201), Expect = 2e-17
Identities = 64/207 (30%), Positives = 99/207 (47%), Gaps = 5/207 (2%)
Frame = +2
Query: 170 NALLHQRRSSKSHHPPVAYATLTPHPINNELVLFGGX----YHNGQKXETYNDLFIYNTV 337
++L+ Q+ ++ P Y T + +++ LFGG Y N N+L NT
Sbjct: 171 SSLVWQKANASGARPSGRYGH-TISCLGSKICLFGGRLLDYYFNDLVCFDLNNL---NTS 226
Query: 338 SNVWRQLKAPGAPPPRSAHQAVSTPANKGELWVFGGEFTSPSETQFYHYKDLWCFSFAER 517
+ W PPP A T ++K L++FGG F++ DLWC+ +
Sbjct: 227 DSRWELASVVNDPPPARAGHVAFTFSDK--LYIFGGT----DGANFFN--DLWCYHPKQS 278
Query: 518 KWEKVVAPN-GPSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVT 694
W KV P+PR+GH +++ LYVFGG DG + +DLY F L ++ W K++
Sbjct: 279 AWSKVETFGVAPNPRAGHAASVVEGILYVFGGRASDGT---FLNDLYAFRLSSKHWYKLS 335
Query: 695 VSGRGPSPRSACVMLPCGNDSLLVYGG 775
PSPRS+ L C +L++ GG
Sbjct: 336 DLPFTPSPRSSHT-LSCSGLTLVLIGG 361
Score = 84.2 bits (199), Expect = 4e-17
Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 6/189 (3%)
Frame = +2
Query: 248 INNELVLFGGXYHNGQKXETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANKGE 427
I N ++FGG ++ N L++ NT S VW++ A GA P +S +K
Sbjct: 142 IGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANASGARPSGRYGHTISCLGSK-- 199
Query: 428 LWVFGGEFTSPSETQFYHYKDLWCFSF-----AERKWEKVVAPNGPSP-RSGHRMALLSR 589
+ +FGG Y++ DL CF ++ +WE N P P R+GH S
Sbjct: 200 ICLFGGRLLD------YYFNDLVCFDLNNLNTSDSRWELASVVNDPPPARAGHVAFTFSD 253
Query: 590 KLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVTVSGRGPSPRSACVMLPCGNDSLLVY 769
KLY+FGG DG +F+DL+ + WSKV G P+PR+ L V+
Sbjct: 254 KLYIFGG--TDG--ANFFNDLWCYHPKQSAWSKVETFGVAPNPRAGHA-ASVVEGILYVF 308
Query: 770 GGFSRVRDG 796
GG R DG
Sbjct: 309 GG--RASDG 315
Score = 54.4 bits (125), Expect = 3e-08
Identities = 40/146 (27%), Positives = 62/146 (42%), Gaps = 3/146 (2%)
Frame = +2
Query: 347 WRQLKAPGAPP--PRSAHQAVSTPANKGELWVFGGEFTSPSETQFYHYKDLWCFSFAERK 520
W +L G+ PR +H + E+++FGG S S+ + DLW + A +
Sbjct: 66 WSKLTVRGSSNVLPRYSHASHLYAEGGQEIYIFGG-VASDSQPK----NDLWVLNLATSQ 120
Query: 521 WEKVVA-PNGPSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVTV 697
+ + + PSPR GH L+ VFGG + R + LY + W K
Sbjct: 121 FTSLRSLGETPSPRLGHASILIGNAFIVFGGLTNHDVADRQDNSLYLLNTSSLVWQKANA 180
Query: 698 SGRGPSPRSACVMLPCGNDSLLVYGG 775
SG PS R + C + ++GG
Sbjct: 181 SGARPSGRYGHT-ISCLGSKICLFGG 205
>SPAC6G10.02c |tea3||cell end marker Tea3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1125
Score = 54.8 bits (126), Expect(2) = 4e-13
Identities = 31/93 (33%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Frame = +2
Query: 500 FSFAERKWEK-VVAPNGPSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTR 676
F + WE + + P PRS H + L+ K++V GG+ D G DL+ F L+T
Sbjct: 228 FDETDWSWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGP----LSDLWLFDLETL 283
Query: 677 TWSKVTVSGRGPSPRSACVMLPCGNDSLLVYGG 775
+W++V GR P PR +D++ +YGG
Sbjct: 284 SWTEVRSIGRFPGPREGHQATTI-DDTVYIYGG 315
Score = 52.0 bits (119), Expect = 2e-07
Identities = 33/109 (30%), Positives = 54/109 (49%), Gaps = 4/109 (3%)
Frame = +2
Query: 377 PPRSAHQAVSTPANKGELWVFGGEFTSPSETQFYHYKDLWCFSFAERKWEKVVAPNG-PS 553
P R H V + +++FGG + T L+ ++F +W V + PS
Sbjct: 111 PARVGHSIV---CSADTIYLFGGCDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPS 167
Query: 554 PRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTF---CLDTRTWSKV 691
PR+GH M L+ KL++FGG C +Y +D++ F +D RT S++
Sbjct: 168 PRTGHSMLLVDSKLWIFGGECQG----KYLNDIHLFDTKGVDRRTQSEL 212
Score = 47.6 bits (108), Expect = 4e-06
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Frame = +2
Query: 371 APPPRSAHQAVSTPANKGELWVFGGEF-TSPSETQFYHYKDLWCFSFAERKWEKVVAPNG 547
+PPPRS H S +G+++V GG T P DLW F W +V +
Sbjct: 244 SPPPRSNH---SVTLVQGKIFVHGGHNDTGP-------LSDLWLFDLETLSWTEVRSIGR 293
Query: 548 -PSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVT 694
P PR GH+ + +Y++GG + G ++L+ F + WS V+
Sbjct: 294 FPGPREGHQATTIDDTVYIYGGRDNKG---LILNELWAFNYSQQRWSLVS 340
Score = 39.9 bits (89), Expect = 8e-04
Identities = 31/124 (25%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +2
Query: 413 ANKGELWVFGGEFTSPSETQFYHYKDLWCFSFAERKWEKVVAPNGPSPRSGHRMALLSRK 592
AN+ +++ GG S + C ++ + E N R GH + +
Sbjct: 69 ANEKFMYLHGGREKSGISNSLFKLDLDSCTVYSHNRGED----NDSPARVGHSIVCSADT 124
Query: 593 LYVFGGYCDDGRDCRY---FDDLYTFCLDTRTWSKVTVSGRGPSPRSACVMLPCGNDSLL 763
+Y+FGG CD D + + LY + + W+ V+ PSPR+ ML + L
Sbjct: 125 IYLFGG-CDSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGHSML-LVDSKLW 182
Query: 764 VYGG 775
++GG
Sbjct: 183 IFGG 186
Score = 39.1 bits (87), Expect = 0.001
Identities = 26/117 (22%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
Frame = +2
Query: 203 SHHPPVAYATLTPHPINNELVLFGGXY--HNGQKXE-TYNDLFIYNTVSNVWRQLKAPGA 373
S P +++ P N+ + L G H G +DL++++ + W ++++ G
Sbjct: 234 SWETPFLHSSSPPPRSNHSVTLVQGKIFVHGGHNDTGPLSDLWLFDLETLSWTEVRSIGR 293
Query: 374 -PPPRSAHQAVSTPANKGELWVFGGEFTSPSETQFYHYKDLWCFSFAERKWEKVVAP 541
P PR HQA + ++++GG + + +LW F++++++W V P
Sbjct: 294 FPGPREGHQATTIDDT---VYIYGGR-----DNKGLILNELWAFNYSQQRWSLVSNP 342
Score = 35.9 bits (79), Expect(2) = 4e-13
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Frame = +2
Query: 260 LVLFGGXYHNGQKXETY----NDLFIYNTVSNVWRQLKAPG-APPPRSAHQAVSTPANKG 424
+ LFGG + + T+ N L+ YN SN W + P PR+ H + +
Sbjct: 125 IYLFGGC--DSETDSTFEVGDNSLYAYNFKSNQWNLVSTQSPLPSPRTGHSMLLVDS--- 179
Query: 425 ELWVFGGE 448
+LW+FGGE
Sbjct: 180 KLWIFGGE 187
>SPAC15A10.10 |mde6||Muskelin homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 716
Score = 55.2 bits (127), Expect = 2e-08
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 8/160 (5%)
Frame = +2
Query: 242 HPINNELVLFGGXYHNGQKXETYNDLFIYNTVSNVWRQLKAPGAPPPRSAHQAVSTPANK 421
+P +N + L+GG +G K T++D +IYN ++W G P R H+ V ++
Sbjct: 271 NPKDNCIYLYGGW--DGVK--TFSDFWIYNVDKDLWIMENEYGIPGERVCHRMV-IDTSQ 325
Query: 422 GELWVFGGEFTSPSETQF--YHYKDLWCFSFAERKWE----KVVAPNGPSPRSGHRMALL 583
+L++ G F S ET+ D W F +++ W GP+ H M++
Sbjct: 326 QKLYLLGNYFGSSRETEVPPDARTDFWEFDISKKVWTCLSYDTSKDGGPAAIFDHGMSVD 385
Query: 584 SRK--LYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVTV 697
++ +YV GG C D F+ LY + R W ++ V
Sbjct: 386 EKRGIVYVSGG-CKWDPDELVFEGLYAYDTKNRIWEQLAV 424
>SPBC21.05c |ral2||Ras guanyl-nucleotide exchange factor Ral2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 611
Score = 37.5 bits (83), Expect = 0.004
Identities = 28/104 (26%), Positives = 46/104 (44%), Gaps = 1/104 (0%)
Frame = +2
Query: 542 NGPSPRSGHRMALLSRKLYVFGGYCDDGRDCRYFDDLYTFCLDTRTWSKVTVSG-RGPSP 718
N P P G + + +V+GG D + + +D+Y L+T +W +V G + P P
Sbjct: 27 NVPKPLIGESVIKYGDEAFVYGGR--DALNAQLVNDMYVVDLNTCSWKQVEYQGNQKPIP 84
Query: 719 RSACVMLPCGNDSLLVYGGFSRVRDGKTERACTHGDMFRLSTKQ 850
R N+ L+ +GG D K D++ + TKQ
Sbjct: 85 R-YFHSGDLWNNKLIFFGGMGFNDDTKCLYVLNDIDIYDIETKQ 127
>SPBP8B7.27 |mug30||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 807
Score = 28.3 bits (60), Expect = 2.5
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Frame = -1
Query: 597 YNFRLRSAILCPERGEGPLGATTFSHF----LSANEKHHKSL 484
+NF+LR ++L P+ + P+ T F+H S+ EK K L
Sbjct: 753 HNFQLRISVLGPDSDQLPISHTCFNHLCIWEYSSREKLKKKL 794
>SPBC106.17c |cys2||O-acetyltransferase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 504
Score = 27.9 bits (59), Expect = 3.3
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 3/45 (6%)
Frame = -1
Query: 822 PCV---QARSVLPSRTLEKPPYTSNESFPQGSITQADLGLGPRPL 697
PCV Q RS ++L+K N P SIT L GP P+
Sbjct: 29 PCVDQAQERSRQFEQSLQKQQACPNSVDPSASITSPSLSSGPEPV 73
>SPBC12C2.11 ||SPBC21D10.02|glutamine-fructose-6-phosphate
transaminase |Schizosaccharomyces pombe|chr 2|||Manual
Length = 696
Score = 27.1 bits (57), Expect = 5.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +2
Query: 365 PGAPPPRSAHQAVSTPANKGEL 430
PG P P S H S PA G L
Sbjct: 224 PGTPKPTSLHPVFSNPATNGML 245
>SPAC25B8.03 |||phosphatidylserine decarboxylase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 516
Score = 26.6 bits (56), Expect = 7.5
Identities = 17/59 (28%), Positives = 25/59 (42%), Gaps = 3/59 (5%)
Frame = +2
Query: 332 TVSNVWRQLKAPGAPPPRSAHQAVSTPANKGELWVFG---GEFTSPSETQFYHYKDLWC 499
++S VW Q P + TP K WVFG E P T + +++D +C
Sbjct: 86 SLSRVWGQFNRAHLPT------FLRTPGFKLYAWVFGCNLSELKDPDLTHYRNFQDFFC 138
>SPAC17A5.04c |mde10|mug139|spore wall assembly peptidase
Mde10|Schizosaccharomyces pombe|chr 1|||Manual
Length = 512
Score = 26.2 bits (55), Expect = 9.9
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +2
Query: 503 SFAERKWEKVVAPNGPSPRSGHRMALLSRKLYVFGGYCDDGRDC 634
S E+K+ + + PS +S R+ + G CD G DC
Sbjct: 292 SLVEKKYVSLSCLSKPSEKSVLRLGTCGNGIVEDGEECDCGEDC 335
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,224,799
Number of Sequences: 5004
Number of extensions: 89148
Number of successful extensions: 298
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 259
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 283
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 711409724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -