Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_I17.2
(1293 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 94 2e-19
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 94 2e-19
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 77 3e-14
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 77 3e-14
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 74 3e-13
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 74 3e-13
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 74 3e-13
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 62 6e-10
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 62 6e-10
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 62 6e-10
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 58 1e-08
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 58 1e-08
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 50 5e-06
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 50 5e-06
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical pr... 47 3e-05
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 47 3e-05
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 47 3e-05
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 47 3e-05
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 47 3e-05
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 47 3e-05
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 47 3e-05
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 47 3e-05
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 47 3e-05
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 47 3e-05
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 47 3e-05
Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical pr... 46 4e-05
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 46 4e-05
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 46 4e-05
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 46 4e-05
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 45 1e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 43 4e-04
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 43 4e-04
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 42 0.001
Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 42 0.001
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 42 0.001
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 0.002
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 41 0.002
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 40 0.003
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 40 0.003
AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 40 0.003
AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily a... 40 0.003
U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna b... 40 0.004
U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type ribon... 40 0.004
EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA... 40 0.004
EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA... 40 0.004
EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA... 40 0.004
EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA... 40 0.004
EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA... 40 0.004
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 40 0.005
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 39 0.007
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 39 0.007
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 39 0.009
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 37 0.036
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 37 0.036
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 37 0.036
AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical ... 37 0.036
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 36 0.062
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 36 0.062
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 36 0.062
U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya bind... 36 0.062
U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical p... 35 0.11
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 35 0.11
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 35 0.14
AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical ... 35 0.14
AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical ... 35 0.14
AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical ... 35 0.14
AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical... 35 0.14
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 35 0.14
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 35 0.14
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 35 0.14
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 35 0.14
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 34 0.25
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 33 0.44
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 33 0.44
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 33 0.44
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 33 0.44
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.58
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 33 0.58
U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical p... 33 0.58
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 32 0.77
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 32 0.77
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 31 1.3
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 31 1.3
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 31 1.3
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 31 1.3
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 31 1.3
Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 30 3.1
U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical pr... 30 3.1
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 30 3.1
L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical pr... 30 4.1
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 29 5.4
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 29 5.4
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 5.4
AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya bi... 29 5.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 7.2
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 29 9.5
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 29 9.5
AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical ... 29 9.5
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 94.3 bits (224), Expect = 2e-19
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +1
Query: 430 MAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 606
+AA E TI K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ 146
Query: 607 KNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 147 TKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 4e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 679 PKRTIGGKEVDVKRA 723
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
Score = 49.2 bits (112), Expect = 6e-06
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
K+FVGG+S + L HF YGE+ VK GRSRGFAF+ F
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.5 bits (83), Expect = 0.020
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
K+FVGGL + + LR HF +G++ T R FAFIVF+
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 94.3 bits (224), Expect = 2e-19
Identities = 44/102 (43%), Positives = 64/102 (62%), Gaps = 1/102 (0%)
Frame = +1
Query: 430 MAAGEHTINNKKVDPKKAKARHGK-IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKT 606
+AA E TI K V+ K AK+R K +FVGGL S+ S+ ++R+ F +FG + ++E PFDK
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQ 146
Query: 607 KNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
R+ F FI FE E+ + K+T G +E DVK+A P+
Sbjct: 147 TKARRNFAFIVFEEEESADKASSQTKQTFGTRECDVKKAVPQ 188
Score = 63.3 bits (147), Expect = 4e-10
Identities = 25/75 (33%), Positives = 50/75 (66%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGG+S E++++++ + F+++G + + ++ +D+T + +GF F+ F + + L
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLALAA 89
Query: 679 PKRTIGGKEVDVKRA 723
++TI GK V+VK A
Sbjct: 90 REQTIKGKSVEVKPA 104
Score = 49.2 bits (112), Expect = 6e-06
Identities = 23/48 (47%), Positives = 28/48 (58%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
K+FVGG+S + L HF YGE+ VK GRSRGFAF+ F
Sbjct: 30 KIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEF 77
Score = 37.5 bits (83), Expect = 0.020
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
K+FVGGL + + LR HF +G++ T R FAFIVF+
Sbjct: 111 KVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFE 159
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 77.0 bits (181), Expect = 3e-14
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Frame = +1
Query: 415 SIXKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEF 567
S+ KV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +
Sbjct: 98 SVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETY 157
Query: 568 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
G + + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 158 GKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 442 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 621
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 622 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 240 GRAAASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
G K+F+GGLSW T + LR +FG +GE+ V P T R+RGF FI F P
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
Score = 40.3 bits (90), Expect = 0.003
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAPVV 416
K+F+GGLS T + ++ +F YG++ + T R RGF F+ F + V
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 77.0 bits (181), Expect = 3e-14
Identities = 37/115 (32%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Frame = +1
Query: 415 SIXKVMAAGEHTINNKKVDPK---------KAKARHGKIFVGGLSSEISDDEIRNFFSEF 567
S+ KV+ EH ++ KK+DPK K + K+F+GGLS+ + ++++ +F +
Sbjct: 98 SVDKVLNNREHELDGKKIDPKVAFPKRTQAKLVTKTKKVFIGGLSATSTLEDMKQYFETY 157
Query: 568 GTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
G + + + FDK + +GF F+TF+S++V + + + I GK V+ K+A PK
Sbjct: 158 GKVEDAMLMFDKATQRHRGFGFVTFDSDEVADKVCEIHFHEINGKMVECKKAQPK 212
Score = 61.3 bits (142), Expect = 1e-09
Identities = 31/97 (31%), Positives = 50/97 (51%)
Frame = +1
Query: 442 EHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRK 621
E +N D GK+F+GGLS + + + +R++F FG + E + D + +
Sbjct: 27 EARLNADSDDGSHGSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRAR 86
Query: 622 GFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPK 732
GF FITF V+ +L + + GK++D K A PK
Sbjct: 87 GFGFITFVDPSSVDKVLNNREHELDGKKIDPKVAFPK 123
Score = 58.0 bits (134), Expect = 1e-08
Identities = 26/57 (45%), Positives = 33/57 (57%)
Frame = +3
Query: 240 GRAAASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
G K+F+GGLSW T + LR +FG +GE+ V P T R+RGF FI F P
Sbjct: 40 GSQDPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDP 96
Score = 40.3 bits (90), Expect = 0.003
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAPVV 416
K+F+GGLS T + ++ +F YG++ + T R RGF F+ F + V
Sbjct: 135 KVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTFDSDEV 187
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 679 PKRTIGGKEVDVKRATPKPD 738
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Frame = +1
Query: 418 IXKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSE 564
+ M H I+ K VDPK+A R K ++V G+ + ++D + +F++
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 565 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
K+FVGGL+ T +R + +GEI V P T RSRGF F+ F
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 249 AASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ +L+V G+ T L +F YG + + T + RGF F+ F
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 679 PKRTIGGKEVDVKRATPKPD 738
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Frame = +1
Query: 418 IXKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSE 564
+ M H I+ K VDPK+A R K ++V G+ + ++D + +F++
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 565 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
K+FVGGL+ T +R + +GEI V P T RSRGF F+ F
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 249 AASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ +L+V G+ T L +F YG + + T + RGF F+ F
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 73.7 bits (173), Expect = 3e-13
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGGL+S +DD +R F+S+FG I ++ + D T + +GF F+TF + V+ +K
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQ 83
Query: 679 PKRTIGGKEVDVKRATPKPD 738
I GK VD KRA P+ D
Sbjct: 84 RPHIIDGKTVDPKRAVPRDD 103
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Frame = +1
Query: 418 IXKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSE 564
+ M H I+ K VDPK+A R K ++V G+ + ++D + +F++
Sbjct: 77 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 136
Query: 565 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 137 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 194
Score = 45.2 bits (102), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
K+FVGGL+ T +R + +GEI V P T RSRGF F+ F
Sbjct: 24 KIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 71
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 249 AASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ +L+V G+ T L +F YG + + T + RGF F+ F
Sbjct: 112 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 162
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 62.5 bits (145), Expect = 6e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 109
Query: 679 PKRTIGGKEVDVKRATPK 732
+GGK VD KRA P+
Sbjct: 110 RPHKLGGKTVDSKRAIPR 127
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
KLF+GGLS T + L +F +G + V PNT SRGF F+ F
Sbjct: 50 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 97
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 62.5 bits (145), Expect = 6e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 129
Query: 679 PKRTIGGKEVDVKRATPK 732
+GGK VD KRA P+
Sbjct: 130 RPHKLGGKTVDSKRAIPR 147
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
KLF+GGLS T + L +F +G + V PNT SRGF F+ F
Sbjct: 70 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 117
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 62.5 bits (145), Expect = 6e-10
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
K+F+GGLS + +D+++ N+FS++G +++ + D +GF F+TF S +
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAMND 130
Query: 679 PKRTIGGKEVDVKRATPK 732
+GGK VD KRA P+
Sbjct: 131 RPHKLGGKTVDSKRAIPR 148
Score = 44.8 bits (101), Expect = 1e-04
Identities = 21/48 (43%), Positives = 27/48 (56%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
KLF+GGLS T + L +F +G + V PNT SRGF F+ F
Sbjct: 71 KLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTF 118
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Frame = +1
Query: 418 IXKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSE 564
+ M H I+ K VDPK+A R K ++V G+ + ++D + +F++
Sbjct: 39 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 98
Query: 565 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 544 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 723
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 724 TPKPD 738
P+ D
Sbjct: 61 VPRDD 65
Score = 32.7 bits (71), Expect = 0.58
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 303 LRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+R + +GEI V P T RSRGF F+ F
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 249 AASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ +L+V G+ T L +F YG + + T + RGF F+ F
Sbjct: 74 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 58.4 bits (135), Expect = 1e-08
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 11/118 (9%)
Frame = +1
Query: 418 IXKVMAAGEHTINNKKVDPKKAKARHGK-----------IFVGGLSSEISDDEIRNFFSE 564
+ M H I+ K VDPK+A R K ++V G+ + ++D + +F++
Sbjct: 39 VDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFTK 98
Query: 565 FGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+GT+ + E+ DK + +GF F+TF+ V+ + + G DV++ K +
Sbjct: 99 YGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHMVNGHRCDVRKGLSKDE 156
Score = 54.0 bits (124), Expect = 2e-07
Identities = 25/65 (38%), Positives = 38/65 (58%)
Frame = +1
Query: 544 IRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRA 723
+R F+S+FG I ++ + D T + +GF F+TF + V+ +K I GK VD KRA
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHIIDGKTVDPKRA 60
Query: 724 TPKPD 738
P+ D
Sbjct: 61 VPRDD 65
Score = 32.7 bits (71), Expect = 0.58
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +3
Query: 303 LRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+R + +GEI V P T RSRGF F+ F
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTF 33
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/51 (27%), Positives = 23/51 (45%)
Frame = +3
Query: 249 AASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ +L+V G+ T L +F YG + + T + RGF F+ F
Sbjct: 74 STKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTF 124
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 49.6 bits (113), Expect = 5e-06
Identities = 27/89 (30%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 475 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESE 651
K +RH +FVG L SEI ++R F +FG + E ++ D N+ KG+ F+++ E
Sbjct: 125 KPETSRHFHVFVGDLCSEIDSTKLREAFVKFGEVSEAKIIRDNNTNKGKGYGFVSYPRRE 184
Query: 652 QVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
+ + +G + + AT KPD
Sbjct: 185 DAERAIDEMNGAWLGRRTIRTNWATRKPD 213
Score = 34.7 bits (76), Expect = 0.14
Identities = 26/91 (28%), Positives = 45/91 (49%), Gaps = 3/91 (3%)
Frame = +1
Query: 445 HTINNKKVDP--KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR 618
H + K D +A A + ++VG +++ + +DEIR F FG I EV +
Sbjct: 237 HNQSEKTYDEIFNQAAADNTSVYVGNIAN-LGEDEIRRAFDRFGPINEVR------TFKI 289
Query: 619 KGFCFITFES-EQVVNDLLKTPKRTIGGKEV 708
+G+ F+ FE+ E +++ IGG+ V
Sbjct: 290 QGYAFVKFETKESAARAIVQMNNADIGGQIV 320
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 49.6 bits (113), Expect = 5e-06
Identities = 24/75 (32%), Positives = 37/75 (49%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
KIFVGGL SD + +F +FG I E + D+ + +G+ F+T + K
Sbjct: 36 KIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKD 95
Query: 679 PKRTIGGKEVDVKRA 723
P I G++ +V A
Sbjct: 96 PNPIIDGRKANVNLA 110
Score = 41.9 bits (94), Expect = 0.001
Identities = 19/50 (38%), Positives = 29/50 (58%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
+K+FVGGL + + K L +F +G+I V NT +SRG+ F+ K
Sbjct: 35 TKIFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMK 84
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 48.0 bits (109), Expect = 1e-05
Identities = 20/51 (39%), Positives = 33/51 (64%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
+FVG +S ++S+D IR+ FS+ G +L ++M D+ + KG+ FI F Q
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQ 70
Score = 29.9 bits (64), Expect = 4.1
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG +S+ + +R F G + + TG+ +G+ FI F
Sbjct: 20 VFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEF 66
>Z68297-5|CAC70081.1| 394|Caenorhabditis elegans Hypothetical
protein F11A10.7 protein.
Length = 394
Score = 47.2 bits (107), Expect = 3e-05
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Frame = +1
Query: 442 EHTINNKKVDPKKAK-ARHGKIFVGGLSSEISDDEIRNFFS-EFGTILEVEMPFDKTKNQ 615
+H I KV KK + + IFVG L EI++D + FFS + G + V + DK +
Sbjct: 227 DHVIRVDKVGSKKKEFGKDMAIFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGK 286
Query: 616 RKGFCFITFESEQVVN 663
KGF F+ F+ + V+
Sbjct: 287 GKGFAFVNFKQDSSVS 302
Score = 31.9 bits (69), Expect = 1.0
Identities = 17/49 (34%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAY-GEIXXXNVKXXPNTGRSRGFAFIVFK 404
+FVG L + T L F A G + + +TG+ +GFAF+ FK
Sbjct: 248 IFVGNLPFEITEDALITFFSAQIGPVEAVRIVRDKDTGKGKGFAFVNFK 296
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEM 591
+FVG + +++ +R FS+FGTI V M
Sbjct: 145 VFVGNMPLTMNEKSVRRIFSDFGTISSVRM 174
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 47.2 bits (107), Expect = 3e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 675
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 67 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 125
Query: 676 TPKR 687
TPK+
Sbjct: 126 TPKQ 129
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPN-TGRSRGFAFIVFK 404
+++FVGG T LR HF + + +VK + G+S+G+ FI F+
Sbjct: 66 NRIFVGGFPTSTTETELREHFEKFFAV--KDVKMVKSLDGQSKGYGFITFE 114
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 47.2 bits (107), Expect = 3e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 666
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 20 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 79
Query: 667 LLKTPKRTIGGKEVDVKRATPKP 735
+ + + +G + + AT KP
Sbjct: 80 IEQMNGQWLGRRTIRTNWATRKP 102
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 130 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 182
Query: 679 PKRTIGGKEV 708
+ +GG+ V
Sbjct: 183 NNQDVGGQLV 192
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG LS + LR F +G++ V NT +S+G+ F+ +
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 70
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 47.2 bits (107), Expect = 3e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 666
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 30 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 89
Query: 667 LLKTPKRTIGGKEVDVKRATPKP 735
+ + + +G + + AT KP
Sbjct: 90 IEQMNGQWLGRRTIRTNWATRKP 112
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 140 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 192
Query: 679 PKRTIGGKEV 708
+ +GG+ V
Sbjct: 193 NNQDVGGQLV 202
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG LS + LR F +G++ V NT +S+G+ F+ +
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 80
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 47.2 bits (107), Expect = 3e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 666
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 133 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 192
Query: 667 LLKTPKRTIGGKEVDVKRATPKP 735
+ + + +G + + AT KP
Sbjct: 193 IEQMNGQWLGRRTIRTNWATRKP 215
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 243 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 295
Query: 679 PKRTIGGKEV 708
+ +GG+ V
Sbjct: 296 NNQDVGGQLV 305
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG LS + LR F +G++ V NT +S+G+ F+ +
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 183
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 47.2 bits (107), Expect = 3e-05
Identities = 23/83 (27%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVND 666
RH +FVG LSSE+ + ++R F FG + + ++ D + KG+ F+++ + E+
Sbjct: 101 RHFHVFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERA 160
Query: 667 LLKTPKRTIGGKEVDVKRATPKP 735
+ + + +G + + AT KP
Sbjct: 161 IEQMNGQWLGRRTIRTNWATRKP 183
Score = 33.9 bits (74), Expect = 0.25
Identities = 19/70 (27%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++VG ++S +++DEIR F+ FG I EV + + +G+ F+ F++ + +++
Sbjct: 211 VYVGNIAS-LTEDEIRQGFASFGRITEVRI------FKMQGYAFVKFDNKDAAAKAIVQM 263
Query: 679 PKRTIGGKEV 708
+ +GG+ V
Sbjct: 264 NNQDVGGQLV 273
Score = 32.3 bits (70), Expect = 0.77
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG LS + LR F +G++ V NT +S+G+ F+ +
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSY 151
Score = 31.9 bits (69), Expect = 1.0
Identities = 11/36 (30%), Positives = 24/36 (66%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK 609
++VG L S +++D I F++ G++ + ++ FD+ K
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDEMK 83
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 47.2 bits (107), Expect = 3e-05
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK- 675
+IFVGG + ++ E+R F +F + +V+M Q KG+ FITFE+E ++ K
Sbjct: 68 RIFVGGFPTSTTETELREHFEKFFAVKDVKM-VKSLDGQSKGYGFITFETEDQAEEIRKL 126
Query: 676 TPKR 687
TPK+
Sbjct: 127 TPKQ 130
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPN-TGRSRGFAFIVFK 404
+++FVGG T LR HF + + +VK + G+S+G+ FI F+
Sbjct: 67 NRIFVGGFPTSTTETELREHFEKFFAV--KDVKMVKSLDGQSKGYGFITFE 115
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 493 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 672
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 673 K 675
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 445 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 618
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 619 ------KGFCFITFESEQVVNDLLKTPKR 687
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 243 RAAASKLFVGGLSWXPTXKXLRXHFGAYGEI-XXXNVKXXPNT-GRS 377
R ++K+FVGG+S K + FG +G + VK PN+ G+S
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKS 247
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 493 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 672
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 673 K 675
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 445 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 618
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 619 ------KGFCFITFESEQVVNDLLKTPKR 687
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 243 RAAASKLFVGGLSWXPTXKXLRXHFGAYGEI-XXXNVKXXPNT-GRS 377
R ++K+FVGG+S K + FG +G + VK PN+ G+S
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKS 247
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 493 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 672
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 163
Query: 673 K 675
+
Sbjct: 164 E 164
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 46.8 bits (106), Expect = 3e-05
Identities = 22/61 (36%), Positives = 33/61 (54%)
Frame = +1
Query: 493 HGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL 672
H +F+GGL ++ +EI FSEFG +L V + D+ KG +TFE + N L
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTFERDSAFNRAL 377
Query: 673 K 675
+
Sbjct: 378 E 378
Score = 37.5 bits (83), Expect = 0.020
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 8/89 (8%)
Frame = +1
Query: 445 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-- 618
HT+ + + K+FVGG+S ++ I FF +FGT+ V+ P + N R
Sbjct: 188 HTVVKNHRNENNQRVVSNKVFVGGISHMMNRKIINKFFGQFGTVF-VDWPVKQKPNSRGK 246
Query: 619 ------KGFCFITFESEQVVNDLLKTPKR 687
+ F+ + EQ V L+ R
Sbjct: 247 SIAIGSYSYLFLVYSDEQSVIKLMSACHR 275
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +3
Query: 243 RAAASKLFVGGLSWXPTXKXLRXHFGAYGEI-XXXNVKXXPNT-GRS 377
R ++K+FVGG+S K + FG +G + VK PN+ G+S
Sbjct: 201 RVVSNKVFVGGISHMMNRKIINKFFGQFGTVFVDWPVKQKPNSRGKS 247
>Z78536-3|CAB01717.2| 360|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 360
Score = 46.4 bits (105), Expect = 4e-05
Identities = 18/70 (25%), Positives = 44/70 (62%)
Frame = +1
Query: 445 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKG 624
H+ + ++ + ++H +FVG LS ++S++ +++ F++FG + E ++ D + KG
Sbjct: 118 HSASEPPMEMRIDTSKHFHVFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKG 177
Query: 625 FCFITFESEQ 654
+ F++F ++Q
Sbjct: 178 YGFVSFPNKQ 187
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+FVG LS + + L+ F +GE+ V T +S+G+ F+ F
Sbjct: 137 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSF 183
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 46.4 bits (105), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 469 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 649 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 732
E+ N + K + GK+V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V L L+ F +YG I V N GRS+GF F+ F+ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 367
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 46.4 bits (105), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 469 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 48 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 106
Query: 649 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 732
E+ N + K + GK+V V + P+
Sbjct: 107 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 135
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V L L+ F +YG I V N GRS+GF F+ F+ P
Sbjct: 256 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 304
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 46.4 bits (105), Expect = 4e-05
Identities = 28/89 (31%), Positives = 45/89 (50%), Gaps = 1/89 (1%)
Frame = +1
Query: 469 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
DP ++ G IF+ L I + I + FS FG IL ++ D+ KG+ F+ FE+
Sbjct: 111 DPAMRRSGAGNIFIKNLDKVIDNKSIYDTFSLFGNILSCKVAIDE-DGFSKGYGFVHFET 169
Query: 649 EQVV-NDLLKTPKRTIGGKEVDVKRATPK 732
E+ N + K + GK+V V + P+
Sbjct: 170 EEAAQNAIQKVNGMLLAGKKVFVGKFQPR 198
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V L L+ F +YG I V N GRS+GF F+ F+ P
Sbjct: 319 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 367
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 679 PKRTIGGKEVDVKRATPKPD 738
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 469 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 649 E-------QVVNDLLKTPKRTIGGK 702
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 35.5 bits (78), Expect = 0.083
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V + LR HF ++G I V N GRS+GF F+ F+ P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 669
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 670 LK 675
++
Sbjct: 295 VE 296
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 45.2 bits (102), Expect = 1e-04
Identities = 25/80 (31%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
++V + +++DD +R+ FS FGTI ++ D+ + KGF F+ FE E+ +
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCFEKPEEATAAVTDM 403
Query: 679 PKRTIGGKEVDVKRATPKPD 738
+ IG K + V A K D
Sbjct: 404 NSKMIGAKPLYVALAQRKED 423
Score = 43.6 bits (98), Expect = 3e-04
Identities = 28/85 (32%), Positives = 43/85 (50%), Gaps = 7/85 (8%)
Frame = +1
Query: 469 DPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
DP +A +G IF+ L I + + + FS FG IL ++ D N KG+ F+ FE+
Sbjct: 136 DPAARRAGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDDEGNS-KGYGFVHFET 194
Query: 649 E-------QVVNDLLKTPKRTIGGK 702
E + VN +L + K+ GK
Sbjct: 195 EHSAQTAIEKVNGMLLSDKKVYVGK 219
Score = 35.5 bits (78), Expect = 0.083
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V + LR HF ++G I V N GRS+GF F+ F+ P
Sbjct: 345 LYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDEN-GRSKGFGFVCFEKP 393
Score = 29.5 bits (63), Expect = 5.4
Identities = 13/62 (20%), Positives = 28/62 (45%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDL 669
++ +FV + +++ FS+FG I + D + + KGF F+ F +
Sbjct: 236 KYTNVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTD-AQGKPKGFGFVAFADQDAAGQA 294
Query: 670 LK 675
++
Sbjct: 295 VE 296
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 44.0 bits (99), Expect = 2e-04
Identities = 18/47 (38%), Positives = 29/47 (61%)
Frame = +1
Query: 508 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
V L E+++DE+R+ F + G ++ + + DK KGF F+TFES
Sbjct: 180 VTNLPQEMNEDELRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFES 226
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 43.2 bits (97), Expect = 4e-04
Identities = 23/94 (24%), Positives = 42/94 (44%)
Frame = +1
Query: 448 TINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGF 627
T N K+ + K +++ + ++ ++F +G+I V M +D +GF
Sbjct: 9 TTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGF 68
Query: 628 CFITFESEQVVNDLLKTPKRTIGGKEVDVKRATP 729
ITF+S+ N ++ I G VDV+ P
Sbjct: 69 ASITFDSKDGANKAIEQRPHVIDGDRVDVEPYIP 102
Score = 34.7 bits (76), Expect = 0.14
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+++ + W L +F YG I N+ P+TG RGFA I F
Sbjct: 27 VYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHRGFASITF 73
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 43.2 bits (97), Expect = 4e-04
Identities = 15/51 (29%), Positives = 33/51 (64%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
I++GGLS +S+ ++ FS++G ++ + + DK + KGF F+ ++ ++
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYKDQR 90
Score = 41.1 bits (92), Expect = 0.002
Identities = 17/48 (35%), Positives = 30/48 (62%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
+++GGLS+ + + F YGE+ N+ +TG+S+GFAF+ +K
Sbjct: 40 IYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCYK 87
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 41.9 bits (94), Expect = 0.001
Identities = 28/114 (24%), Positives = 52/114 (45%), Gaps = 9/114 (7%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARH-------GKIFVGGLSSEISDDEIRNFFS-EFGTIL 579
KV+A +H I+ ++ D K R +IFVG L+ ++ + ++R F E + +
Sbjct: 228 KVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISRIFVGRLTDKVDEHQLRKVFGDEAKSYI 287
Query: 580 EVEMPFDK-TKNQRKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVKRATPKPD 738
E + D +GF F+T S + ++ T+ G V + A P+ +
Sbjct: 288 ETAVVTDVFIPKPFRGFAFVTLSSAEAAERIVSKGSLTVNGLSVGLSIAQPREE 341
Score = 39.9 bits (89), Expect = 0.004
Identities = 21/72 (29%), Positives = 37/72 (51%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 681
+ V G+ + +D+ + +F + GT++ E+ K+ KGF F+ S N +L P
Sbjct: 175 LIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVGEQNKVLAIP 233
Query: 682 KRTIGGKEVDVK 717
+ I G+ DVK
Sbjct: 234 QHMIDGRRCDVK 245
>Z50874-3|CAA90773.1| 409|Caenorhabditis elegans Hypothetical
protein R10E4.2b protein.
Length = 409
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 109 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 159
>Z50874-2|CAA90772.1| 357|Caenorhabditis elegans Hypothetical
protein R10E4.2a protein.
Length = 357
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/51 (35%), Positives = 28/51 (54%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
+++ GL +DD +R S++G I + DK N KG+ F+ FES Q
Sbjct: 83 LYIRGLMPNTNDDLLREMCSKYGNIASTKAIMDKATNNCKGYGFVDFESPQ 133
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 681
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 15 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 74
Query: 682 KR-TIGGKEVDVKRAT 726
+ GK + V +A+
Sbjct: 75 NMIKLYGKPIKVNKAS 90
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 675
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 102 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 160
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXX-NVKXXPNTGRSRGFAFIVF 401
+ +FVG L K L F A+G I + ++G S+GFAFI F
Sbjct: 100 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
>Z32683-11|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 41.5 bits (93), Expect = 0.001
Identities = 18/72 (25%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 681
+FV + E ++D++ + FSE+G I + + D+ KG+ + +E+++ N+ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 682 KRT-IGGKEVDV 714
T + G+ V V
Sbjct: 117 NDTDLLGQNVKV 128
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 41.5 bits (93), Expect = 0.001
Identities = 21/76 (27%), Positives = 39/76 (51%), Gaps = 1/76 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTP 681
I+VGGL ++S+ + + G ++ V MP D+ +GF F+ F E+ + +K
Sbjct: 25 IYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKIL 84
Query: 682 KR-TIGGKEVDVKRAT 726
+ GK + V +A+
Sbjct: 85 NMIKLYGKPIKVNKAS 100
Score = 39.1 bits (87), Expect = 0.007
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEV-EMPFDKTKNQRKGFCFITFESEQVVNDLLK 675
IFVG L E+ + + + FS FG IL+V ++ D KGF FI F S + + L+
Sbjct: 112 IFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINFASFEASDTALE 170
Score = 29.9 bits (64), Expect = 4.1
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXX-NVKXXPNTGRSRGFAFIVF 401
+ +FVG L K L F A+G I + ++G S+GFAFI F
Sbjct: 110 ANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 41.1 bits (92), Expect = 0.002
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES-EQVVNDLLKT 678
+FV LSS+ D + FS+FG I+ V++ D T+ Q KG+ F++ + + N +L
Sbjct: 376 LFVYNLSSDTDDTLLWQLFSQFGAIVNVKILRDLTQ-QCKGYAFVSMSNYTEAYNAMLSL 434
Query: 679 PKRTIGGKEVDV--KRATP 729
+ GK + V K +TP
Sbjct: 435 NGTNLAGKTLQVVFKSSTP 453
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 40.7 bits (91), Expect = 0.002
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 1/78 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
K+FV + + +DDE++ FS+FGT+ V K + KG F+ F++E + +
Sbjct: 684 KVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKCVAS 742
Query: 679 -PKRTIGGKEVDVKRATP 729
K + +E++V + P
Sbjct: 743 GDKLMLRERELEVALSNP 760
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/50 (34%), Positives = 28/50 (56%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 651
++VG + +++E+ NFFS G I V + D+ + +GF FI F E
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEE 56
Score = 35.1 bits (77), Expect = 0.11
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
++VG + T + L F + G+I + TGR RGFAFI F
Sbjct: 7 VYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEF 53
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 40.3 bits (90), Expect = 0.003
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 1/88 (1%)
Frame = +1
Query: 475 KKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
+KA+A ++VG + + +EI F G++ V + D+ KGF ++ F ++
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKE 130
Query: 655 VVNDLLKTPKRTIGGKEVDV-KRATPKP 735
+ + L + G+++ V + T KP
Sbjct: 131 GMQNALAMTDSLLRGRQIKVDPKRTNKP 158
Score = 33.5 bits (73), Expect = 0.33
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = +3
Query: 246 AAASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A A ++VG + + T + + HF G + ++ +G +GFA++ F
Sbjct: 75 ADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEF 126
>AL117204-22|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 40.3 bits (90), Expect = 0.003
Identities = 19/81 (23%), Positives = 40/81 (49%), Gaps = 1/81 (1%)
Frame = +1
Query: 490 RHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE-SEQVVND 666
R ++VGG + ++++ + F FG ++ + +P D + +GF F+ F+ +E
Sbjct: 9 RKRTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMA 68
Query: 667 LLKTPKRTIGGKEVDVKRATP 729
+ + + GK + V A P
Sbjct: 69 IDNMNESELFGKTIRVNFARP 89
Score = 33.9 bits (74), Expect = 0.25
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
L+VGG + T K L F +G++ ++ +G+ RGF F+ F
Sbjct: 13 LYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEF 59
>AC024818-2|AAF60781.1| 302|Caenorhabditis elegans Temporarily
assigned gene nameprotein 262 protein.
Length = 302
Score = 40.3 bits (90), Expect = 0.003
Identities = 17/79 (21%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF-ESEQVVNDLLK 675
++F G L +E+SD+ + F ++ + + ++ + N+ KG+ F++F +SE V + +
Sbjct: 204 RVFCGDLGNEVSDELLAKAFRKYPSFQKAKVVRESRTNKSKGYGFVSFRDSEDYVRAMRE 263
Query: 676 TPKRTIGGKEVDVKRATPK 732
+ +G + + ++++ K
Sbjct: 264 MDGKYVGNRPIKLRKSAWK 282
>U80455-1|AAB37881.1| 584|Caenorhabditis elegans Elav-type rna
binding protein familyprotein 1, isoform a protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>U53931-1|AAA98566.1| 584|Caenorhabditis elegans elav-type
ribonucleoprotein protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523770-1|ABS18836.1| 513|Caenorhabditis elegans ELAV-type RNA
binding protein variantE protein.
Length = 513
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523769-1|ABS18835.1| 327|Caenorhabditis elegans ELAV-type RNA
binding protein variantD protein.
Length = 327
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523768-1|ABS18834.1| 378|Caenorhabditis elegans ELAV-type RNA
binding protein variantC protein.
Length = 378
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523767-1|ABS18833.1| 193|Caenorhabditis elegans ELAV-type RNA
binding protein variantB protein.
Length = 193
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 34.7 bits (76), Expect = 0.14
Identities = 18/65 (27%), Positives = 33/65 (50%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQR 618
R
Sbjct: 178 DGKSR 182
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>EF523766-1|ABS18832.1| 584|Caenorhabditis elegans ELAV-type RNA
binding protein variantA protein.
Length = 584
Score = 39.9 bits (89), Expect = 0.004
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +1
Query: 454 NNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCF 633
N+ P + K+FVG + + ++ + R F ++G++ + DK+ KG CF
Sbjct: 41 NDVSPSPSEPDTDAIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCF 100
Query: 634 ITF 642
+TF
Sbjct: 101 VTF 103
Score = 39.9 bits (89), Expect = 0.004
Identities = 22/73 (30%), Positives = 38/73 (52%)
Frame = +1
Query: 424 KVMAAGEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
KV+ H + K D + R K+F+G LS + +++ +R F++FG I + + D+
Sbjct: 120 KVIEGMHHPVQMKPADTENRNER--KLFIGQLSKKHNEENLREIFAKFGHIEDCSVLRDQ 177
Query: 604 TKNQRKGFCFITF 642
R G F+TF
Sbjct: 178 DGKSR-GCAFVTF 189
Score = 28.7 bits (61), Expect = 9.5
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A K+FVG + R F YG + N+ +T S+G F+ F
Sbjct: 54 AIKMFVGQIPRQWNETDCRRLFEKYGSVFSCNILRDKSTQASKGCCFVTF 103
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 39.5 bits (88), Expect = 0.005
Identities = 14/50 (28%), Positives = 29/50 (58%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 651
++VG + ++D++ N+FS+ G + V + D+ + +GF F+ F E
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEE 55
Score = 32.7 bits (71), Expect = 0.58
Identities = 15/47 (31%), Positives = 22/47 (46%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
++VG + T L +F G + + TGR RGFAF+ F
Sbjct: 6 VYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEF 52
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.5 bits (78), Expect = 0.083
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 478 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 645
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
KLF+G LS + +R F +GE+ V + G S+G AF+ +K
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 39.1 bits (87), Expect = 0.007
Identities = 16/48 (33%), Positives = 27/48 (56%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
K+FVG + + + ++R+ F +FG I E + DK KG F+T+
Sbjct: 30 KLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTY 77
Score = 35.5 bits (78), Expect = 0.083
Identities = 19/56 (33%), Positives = 30/56 (53%)
Frame = +1
Query: 478 KAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFE 645
K K K+F+G LS + S+DE+R F+ FG + EV + KG F+ ++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTV-LRGADGASKGCAFVKYK 172
Score = 30.7 bits (66), Expect = 2.3
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
KLF+G LS + +R F +GE+ V + G S+G AF+ +K
Sbjct: 125 KLFIGMLSKQQSEDEVRALFATFGELDEVTVLRGAD-GASKGCAFVKYK 172
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 38.7 bits (86), Expect = 0.009
Identities = 14/50 (28%), Positives = 30/50 (60%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 651
++VG + + +++EI N+F+ G + V + +D+ + +GF F+ F E
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEE 57
Score = 35.9 bits (79), Expect = 0.062
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
++VG + + T + + +F A G + + TGR RGFAF+ F
Sbjct: 8 VYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEF 54
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 36.7 bits (81), Expect = 0.036
Identities = 21/47 (44%), Positives = 25/47 (53%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
L V LS T K LR FG +GEI ++ +G SRGF FI F
Sbjct: 78 LGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
Score = 36.3 bits (80), Expect = 0.047
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +1
Query: 508 VGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
V LSS ++ ++R+ F EFG I + ++ +D+ +GF FI F
Sbjct: 80 VFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYF 124
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 36.7 bits (81), Expect = 0.036
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQ 654
++VG LS +D++ F G + V M D+ K GFCF+ + + +
Sbjct: 39 LYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTRE 89
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 36.7 bits (81), Expect = 0.036
Identities = 14/51 (27%), Positives = 24/51 (47%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
A ++VG + W T + HF G++ + TG + FAF+ F+
Sbjct: 45 ARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQ 95
>AC006833-6|AAF60950.1| 491|Caenorhabditis elegans Hypothetical
protein ZK616.1 protein.
Length = 491
Score = 36.7 bits (81), Expect = 0.036
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPF-DKTKNQRKGFCFITFESEQVVNDLL 672
+++VGG S+ +S ++IRN ++ EV + + + +GF F+ S N LL
Sbjct: 10 RLYVGGFSTNLSSEQIRNLITQLAAPFEVSIDIVENGSRKHRGFAFVQCRSLAEANVLL 68
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 679 PK-RTIGGKEVDVKRATPK 732
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 679 PK-RTIGGKEVDVKRATPK 732
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 35.9 bits (79), Expect = 0.062
Identities = 20/79 (25%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
+I++G L+S +S+ +I +FF +G I +V + + GF F+ F+ ++ D +
Sbjct: 4 RIYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAVHD 55
Query: 679 PK-RTIGGKEVDVKRATPK 732
+ +GG+ V + + P+
Sbjct: 56 LNGKELGGERVILDYSKPR 74
>U23450-1|AAK31467.2| 422|Caenorhabditis elegans Cpeb polya binding
family protein 2 protein.
Length = 422
Score = 35.9 bits (79), Expect = 0.062
Identities = 16/32 (50%), Positives = 23/32 (71%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 594
K+FVGGL S + + +I NFFS +G L+V+ P
Sbjct: 89 KVFVGGLPSCVKESDILNFFSRYGR-LQVDWP 119
>U23172-15|AAN63408.1| 374|Caenorhabditis elegans Hypothetical
protein F25B5.7d protein.
Length = 374
Score = 35.1 bits (77), Expect = 0.11
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 472 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 651
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 652 QVVNDLLKT-PKRTIGGKEVDVKRA 723
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 35.1 bits (77), Expect = 0.11
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 1/85 (1%)
Frame = +1
Query: 472 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESE 651
PKK ++FVG L +E+ + E++ FS G I E + KGF F+ ++
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAECYL-------SGKGFAFLRLDTR 160
Query: 652 QVVNDLLKT-PKRTIGGKEVDVKRA 723
+ R I G++V V+ A
Sbjct: 161 AHAESAKEAIDGRIIHGRQVRVRFA 185
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.14
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AF067616-7|AAM98029.1| 423|Caenorhabditis elegans Hypothetical
protein F29C4.7b protein.
Length = 423
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 675
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 676 TPKRTI--GGKEVDV 714
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-6|AAC19192.1| 520|Caenorhabditis elegans Hypothetical
protein F29C4.7a protein.
Length = 520
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 675
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 171 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 227
Query: 676 TPKRTI--GGKEVDV 714
R I GG + +
Sbjct: 228 EQDRPIRAGGSRMKI 242
>AF067616-5|AAU05574.1| 497|Caenorhabditis elegans Hypothetical
protein F29C4.7c protein.
Length = 497
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/75 (29%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTK-NQRKGFCFITFES-EQVVNDLLK 675
+FVG + S++ + EIR+ F E G + EV++ KT N + F+ F++ +Q + +
Sbjct: 148 LFVGNMPSDVKEREIRHVFEEHGKVEEVDI---KTPINTDAAYAFVMFQTVDQAIQAKAE 204
Query: 676 TPKRTI--GGKEVDV 714
R I GG + +
Sbjct: 205 EQDRPIRAGGSRMKI 219
>AF003141-14|AAM48549.1| 362|Caenorhabditis elegans Hypothetical
protein W02D3.11b protein.
Length = 362
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 514 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 693
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 694 GGKEVDVKRATPKP 735
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 34.7 bits (76), Expect = 0.14
Identities = 21/74 (28%), Positives = 38/74 (51%)
Frame = +1
Query: 514 GLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKTPKRTI 693
GL E ++ E+R+FF G I +E+P + + G + F +E+ N+ LK + +
Sbjct: 11 GLPWEATEQELRDFFGNNG-IESLEIP--RRNGRTSGDAKVVFTNEEDYNNALKKDREHL 67
Query: 694 GGKEVDVKRATPKP 735
G + ++V A P
Sbjct: 68 GSRYIEVFPAGGAP 81
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 34.7 bits (76), Expect = 0.14
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 292 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 338
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 34.7 bits (76), Expect = 0.14
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 267 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 313
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 34.7 bits (76), Expect = 0.14
Identities = 14/48 (29%), Positives = 26/48 (54%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITF 642
KIF+GGL + +++D+++ FG + + D N KG+ F +
Sbjct: 270 KIFIGGLPNYLTEDQVKELLCSFGPLKAFSLNVDSQGNS-KGYAFAEY 316
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 33.9 bits (74), Expect = 0.25
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
LFVG +++ + LR F AYG+I + G+ RG+AFI +
Sbjct: 106 LFVGRINYETSESKLRREFEAYGKIKKLTM-VHDEAGKPRGYAFIEY 151
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 675
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 675
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 33.1 bits (72), Expect = 0.44
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLK 675
K++VGGL S+ + E+ F FG I +V + + GF F+ ++ + D ++
Sbjct: 4 KVYVGGLPSDATSQELEEIFDRFGRIRKVWV-----ARRPPGFAFVEYDDVRDAEDAVR 57
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 33.1 bits (72), Expect = 0.44
Identities = 18/50 (36%), Positives = 24/50 (48%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
L+V L L+ F +YG I V N GRS+GF F+ F+ P
Sbjct: 259 LYVKNLDETVDDDGLKKQFESYGNITSAKVMTDEN-GRSKGFGFVCFEKP 307
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.58
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 439 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 615
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 616 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 717
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 32.7 bits (71), Expect = 0.58
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 1/94 (1%)
Frame = +1
Query: 439 GEHTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE-VEMPFDKTKNQ 615
G+HT + + K +FVG +S + SD+ IR +E G + + K Q
Sbjct: 31 GQHTPAQQS---SQQKPDSSPVFVGNISDKCSDEFIRKILNECGNVASWKRIKGSNGKLQ 87
Query: 616 RKGFCFITFESEQVVNDLLKTPKRTIGGKEVDVK 717
GFC T + E + L + +G K++ VK
Sbjct: 88 GFGFCHFT-DLEGTLRALRILHEFHLGDKKLTVK 120
>U23172-14|AAL02495.1| 165|Caenorhabditis elegans Hypothetical
protein F25B5.7b protein.
Length = 165
Score = 32.7 bits (71), Expect = 0.58
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +1
Query: 472 PKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILE 582
PKK ++FVG L +E+ + E++ FS G I E
Sbjct: 108 PKKKFTGRCRLFVGNLPNEVKETELKELFSPHGDIAE 144
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 32.3 bits (70), Expect = 0.77
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +1
Query: 457 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 636
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 12 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 71
Query: 637 TFESEQVVNDLLKTPKRTIGGKEVDVKR 720
F E+ V L + + G + ++R
Sbjct: 72 EFWDEESVPLGLALNGQRLMGAPLQIQR 99
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 32.3 bits (70), Expect = 0.77
Identities = 17/88 (19%), Positives = 39/88 (44%)
Frame = +1
Query: 457 NKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFI 636
N K++ + + + ++ + ++ FFS G + +V + D + KG C++
Sbjct: 157 NAKLELTAEERDQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTGRSKGICYV 216
Query: 637 TFESEQVVNDLLKTPKRTIGGKEVDVKR 720
F E+ V L + + G + ++R
Sbjct: 217 EFWDEESVPLGLALNGQRLMGAPLQIQR 244
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 31.5 bits (68), Expect = 1.3
Identities = 16/51 (31%), Positives = 23/51 (45%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAP 410
+LF+ L + L+ F YGE+ V TG +GFA + F P
Sbjct: 280 RLFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFVFP 330
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 31.5 bits (68), Expect = 1.3
Identities = 22/82 (26%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRN------FFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVV 660
K F+GGL + +I F E ++ + D+ KGF ++TFE+EQ +
Sbjct: 7 KAFIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQM 66
Query: 661 NDLLK-TPKRTIGGKEVDVKRA 723
N + G + + V RA
Sbjct: 67 NTAISGLNGADFGNRVLKVNRA 88
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 31.5 bits (68), Expect = 1.3
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A +F+G + + T + + HF G+I + T + + FA+I F
Sbjct: 54 AKSVFIGNVDFNSTIEEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEF 103
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ L + LS+ T LR F YG+I ++ + +S+GF F+ F
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 31.5 bits (68), Expect = 1.3
Identities = 15/49 (30%), Positives = 25/49 (51%)
Frame = +3
Query: 255 SKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
+ L + LS+ T LR F YG+I ++ + +S+GF F+ F
Sbjct: 19 TSLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRF 67
>Z66521-8|CAA91394.1| 281|Caenorhabditis elegans Hypothetical
protein W02B12.2 protein.
Length = 281
Score = 31.1 bits (67), Expect = 1.8
Identities = 17/70 (24%), Positives = 37/70 (52%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLLKT 678
++++G L + SD ++ +FF +G + +V M + GF F+ F+ ++ +D +
Sbjct: 3 RVYIGRLPNRASDRDVEHFFRGYGKLSDVIM--------KNGFGFVDFQDQRDADDAV-- 52
Query: 679 PKRTIGGKEV 708
+ GKE+
Sbjct: 53 --HDLNGKEL 60
>Z19154-9|CAA79552.2| 559|Caenorhabditis elegans Hypothetical
protein C40H1.1 protein.
Length = 559
Score = 31.1 bits (67), Expect = 1.8
Identities = 14/52 (26%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 427 VMAAGEHTINNKKVDPKKAKARHG-KIFVGGLSSEISDDEIRNFFSEFGTIL 579
+M + + K P A+ + K+F+GGL ++S++++ F FG +L
Sbjct: 221 LMGVSKSCLEASKKRPISAEPLYSRKVFIGGLPIDVSEEQVWATFGAFGKVL 272
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 30.3 bits (65), Expect = 3.1
Identities = 9/41 (21%), Positives = 24/41 (58%)
Frame = +1
Query: 535 DDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQV 657
+ E+ +F +FG +L + + ++ KG+ ++ F+++ V
Sbjct: 45 EKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAV 85
>U28944-8|AAK68193.1| 103|Caenorhabditis elegans Hypothetical
protein C18A3.5c protein.
Length = 103
Score = 30.3 bits (65), Expect = 3.1
Identities = 10/34 (29%), Positives = 23/34 (67%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDK 603
++VG L S +++D I F++ G++ + ++ FD+
Sbjct: 48 LYVGNLDSTVTEDFIATLFNQIGSVTKTKVIFDE 81
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 30.3 bits (65), Expect = 3.1
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +3
Query: 252 ASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVF 401
A +F+G + + T + + HF G I + T + + FA+I F
Sbjct: 60 AKSVFIGNVDFNSTIEEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEF 109
>L07144-9|AAK21441.1| 737|Caenorhabditis elegans Hypothetical
protein R05D3.2 protein.
Length = 737
Score = 29.9 bits (64), Expect = 4.1
Identities = 15/38 (39%), Positives = 22/38 (57%)
Frame = -2
Query: 686 LLGVLSKSFTTCSDSNVMKQKPFLWFFVLSKGISTSKI 573
L+G L S+ ++ PF +FF+ S+G STSKI
Sbjct: 156 LIGALWNYVFVLSNVSLFVLLPFSYFFIESQGFSTSKI 193
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z83119-2|CAB05579.2| 608|Caenorhabditis elegans Hypothetical
protein R05H10.2 protein.
Length = 608
Score = 29.5 bits (63), Expect = 5.4
Identities = 12/51 (23%), Positives = 26/51 (50%)
Frame = +3
Query: 261 LFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFKAPV 413
+F+ LS+ + ++ +G+I + ++G S+G AF+ F P+
Sbjct: 265 VFLRNLSYDTKEELIKEELSKFGKIDLAIICKYKDSGHSKGTAFVHFSTPI 315
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 243 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 291
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/49 (28%), Positives = 25/49 (51%)
Frame = +1
Query: 502 IFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFES 648
+FV L+ +D+++ FS FG I E+ D+ + FI F++
Sbjct: 174 LFVCKLNPVTTDEDLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDN 222
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 5.4
Identities = 18/79 (22%), Positives = 33/79 (41%), Gaps = 4/79 (5%)
Frame = +1
Query: 445 HTINNKKVDPKKAKARHGKIFVGGLSSEISDDEIRNFFSEFGT----ILEVEMPFDKTKN 612
H I+ K + ++F+G + S DEI ++ +P D K
Sbjct: 264 HEISTGKPLKVNVSIANTRLFIGNIPKTKSKDEILEELKTHAEGVVDVIVYSVP-DNEKI 322
Query: 613 QRKGFCFITFESEQVVNDL 669
+ +GFCF+ F + +D+
Sbjct: 323 KNRGFCFVDFIDHKTASDI 341
>AF003145-3|AAB57717.1| 751|Caenorhabditis elegans Cpeb polya
binding family protein 3 protein.
Length = 751
Score = 29.5 bits (63), Expect = 5.4
Identities = 14/32 (43%), Positives = 22/32 (68%)
Frame = +1
Query: 499 KIFVGGLSSEISDDEIRNFFSEFGTILEVEMP 594
KIFVGG+ +I++ +++ F EFG+ VE P
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFGS-CAVEWP 326
Score = 29.1 bits (62), Expect = 7.2
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 258 KLFVGGLSWXPTXKXLRXHFGAYG 329
K+FVGG+ W T L+ FG +G
Sbjct: 296 KIFVGGVPWDITEAALKDSFGEFG 319
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 7.2
Identities = 19/40 (47%), Positives = 20/40 (50%)
Frame = -2
Query: 998 PRXFCPPWYP*LGYPE*X*PP*PP*PS*P*PP*P*LSYPP 879
P FCPP P + P PP PP P P PP P SY P
Sbjct: 52 PPQFCPP--PPMCPPP---PPPPPPPMCPPPPPPMPSYSP 86
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 240 GRAAASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
G + K++VG L K + F YG I ++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 28.7 bits (61), Expect = 9.5
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +3
Query: 240 GRAAASKLFVGGLSWXPTXKXLRXHFGAYGEIXXXNVKXXPNTGRSRGFAFIVFK 404
G + K++VG L K + F YG I ++K +GR FAF+ F+
Sbjct: 4 GGSEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDIK----SGRGPAFAFVEFE 54
>AF003140-8|AAB54169.1| 396|Caenorhabditis elegans Hypothetical
protein C44E4.4 protein.
Length = 396
Score = 28.7 bits (61), Expect = 9.5
Identities = 16/58 (27%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = +1
Query: 484 KARHGKIFVGGLSSEISDDEIRNFFSEFGTILEVEMPFDKTKNQR-KGFCFITFESEQ 654
K +H +++ G S++ D+I + ++FG V M K ++ KG FIT+++ +
Sbjct: 106 KIKHRTVYMKGFSTDTQLDDIIQWANQFGETENVLMRRLKPGDRTFKGSVFITYKTRE 163
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,451,370
Number of Sequences: 27780
Number of extensions: 272314
Number of successful extensions: 831
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 693
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 827
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3620756926
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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