Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I14.2
         (1296 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein ...   209   1e-55
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    26   2.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   6.4  

>AY957503-1|AAY41942.1|  596|Anopheles gambiae vasa-like protein
           protein.
          Length = 596

 Score =  209 bits (511), Expect = 1e-55
 Identities = 103/172 (59%), Positives = 131/172 (76%), Gaps = 1/172 (0%)
 Frame = +1

Query: 481 ETKKP-VTYVPPEPTNDETEIFSSTISSGINFDKFDHIAVKVSGENPPRPIESFETANLR 657
           +T KP   Y+PP PT DE+ IF S ISSGINFDKF+ I V+VSGENPP  +ESFE + LR
Sbjct: 123 KTDKPRELYIPPLPTEDESLIFGSGISSGINFDKFEEIQVRVSGENPPDHVESFERSGLR 182

Query: 658 KYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGCAQTGSGKTAAFLVPIINMLLQDPKD 837
           + V+ NV K+ Y KPTPIQ+ AIPII++GRDLM CAQTGSGKTAAF++P+I+ LL D +D
Sbjct: 183 EEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMACAQTGSGKTAAFMLPMIHHLL-DKED 241

Query: 838 LISXNGCAQPQVIIVSPTRELTLQIFNEXRKFSYGSXLKVAXAYGGTAVXHQ 993
            +       P ++IV+PTREL +QI +E RKF++G+ LKV  +YGGTAV HQ
Sbjct: 242 SLELR-TRNPYIVIVAPTRELAIQIHDEGRKFAHGTKLKVCVSYGGTAVQHQ 292


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 25.8 bits (54), Expect = 2.8
 Identities = 16/41 (39%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
 Frame = -2

Query: 659 FLRFA-VSKLSIGLGGFSPLTFTAIWSNLSKLIPELIVLLK 540
           FLR   ++  SI LGGF  +  T   S L+ ++  L+VLL+
Sbjct: 317 FLRATEMNPSSINLGGFFDVNRTLFKSLLATMVTYLVVLLQ 357


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = -3

Query: 883 ILL*PVAGRSHFXRSDPLDLVITY*LWVPKKQPFY 779
           +L+  VAG+ ++     LD  IT  +W P  Q  Y
Sbjct: 131 VLVGSVAGQRYWSSMLNLDATITCGIWTPDDQQVY 165


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 884,521
Number of Sequences: 2352
Number of extensions: 17305
Number of successful extensions: 18
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)