Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I12.2
         (1284 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    25   1.9  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    23   5.7  
DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor p...    23   7.6  
DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor p...    23   7.6  
AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cycl...    23   7.6  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   7.6  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   7.6  
AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cycl...    23   7.6  

>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 24.6 bits (51), Expect = 1.9
 Identities = 10/20 (50%), Positives = 14/20 (70%)
 Frame = -3

Query: 361 FPTQEIRASTFVKLARRERV 302
           FP   I A +F++L RR+RV
Sbjct: 177 FPALNIVADSFIELIRRQRV 196


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 5.7
 Identities = 11/45 (24%), Positives = 20/45 (44%)
 Frame = -1

Query: 858 PFACSRTCSFSLCTWSLSFTTICASSAFSPLRIFTFSSSFEIRSS 724
           PF      +   C  S S + +CA +  + L +F  + +  + SS
Sbjct: 47  PFCGPNVINPFFCDMSPSLSLLCADTRLNKLAVFIVAGAVGVFSS 91


>DQ091184-1|AAZ42364.1|  157|Apis mellifera lipophorin receptor
           protein.
          Length = 157

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 893 DAIRSATRCGSHHSHALGPAPLACARGPLVS 801
           D +        H SH   PAP   ++ PL+S
Sbjct: 31  DGMNQCQAVNGHCSHLCLPAPRINSKSPLLS 61


>DQ091183-1|AAZ42363.1|  128|Apis mellifera lipophorin receptor
           protein.
          Length = 128

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 10/31 (32%), Positives = 14/31 (45%)
 Frame = -2

Query: 893 DAIRSATRCGSHHSHALGPAPLACARGPLVS 801
           D +        H SH   PAP   ++ PL+S
Sbjct: 31  DGMNQCQAVNGHCSHLCLPAPRINSKSPLLS 61


>AY769960-1|AAV34676.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 188 AVAGXPXPCXCTER 147
           AV+G P PC C  R
Sbjct: 471 AVSGLPEPCRCHAR 484


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 773 HL*EFSLSLPALKYVPAYVVYIW 705
           H+  +   L ++  +P Y++YIW
Sbjct: 529 HVLGWLCGLSSMLCIPGYMIYIW 551


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 7/23 (30%), Positives = 14/23 (60%)
 Frame = -2

Query: 773 HL*EFSLSLPALKYVPAYVVYIW 705
           H+  +   L ++  +P Y++YIW
Sbjct: 582 HVLGWLCGLSSMLCIPGYMIYIW 604


>AB181489-1|BAD22772.1|  603|Apis mellifera soluble guanylyl cyclase
           beta 1 subunit protein.
          Length = 603

 Score = 22.6 bits (46), Expect = 7.6
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -2

Query: 188 AVAGXPXPCXCTER 147
           AV+G P PC C  R
Sbjct: 471 AVSGLPEPCRCHAR 484


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 253,639
Number of Sequences: 438
Number of extensions: 5402
Number of successful extensions: 27
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44063121
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)