Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I10.2
         (1376 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_02_0603 - 11150739-11150746,11150791-11151340                       30   3.7  
04_04_0679 + 27214577-27215023                                         25   8.4  
07_03_0177 - 14770777-14772045                                         29   8.6  
06_01_0178 + 1386981-1387505                                           29   8.6  
10_07_0115 - 13008835-13008877,13009117-13010621                       25   9.6  

>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 30.3 bits (65), Expect = 3.7
 Identities = 12/22 (54%), Positives = 12/22 (54%)
 Frame = -3

Query: 531 PPFXPKKXFFXPPXFGXXPPPP 466
           PP   K  F  PP FG  PPPP
Sbjct: 27  PPRLEKGNFALPPPFGFPPPPP 48


>04_04_0679 + 27214577-27215023
          Length = 148

 Score = 25.0 bits (52), Expect(2) = 8.4
 Identities = 10/14 (71%), Positives = 10/14 (71%)
 Frame = +2

Query: 596 FFFXXXGGGGGGGV 637
           F F   GGGGGGGV
Sbjct: 68  FGFGGGGGGGGGGV 81



 Score = 22.6 bits (46), Expect(2) = 8.4
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +2

Query: 614 GGGGGGGVXXXKKXXXXPXGXGG 682
           GGGGGGG    +       G GG
Sbjct: 73  GGGGGGGGVGGRGGSSGRGGHGG 95


>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 18/57 (31%), Positives = 19/57 (33%)
 Frame = +2

Query: 467 GGGGXXPXXGGXKKXFXGXXGGXXXXXXXXXXGXKXXXXXXXXFFFXXXGGGGGGGV 637
           GGGG     GG      G  GG          G          F     GGGGGGG+
Sbjct: 362 GGGGGLGGGGGGGGGGFGGGGGSGIGGGFGKGGGFGFGVGGGGFGGGGGGGGGGGGI 418


>06_01_0178 + 1386981-1387505
          Length = 174

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 21/72 (29%), Positives = 21/72 (29%)
 Frame = +2

Query: 467 GGGGXXPXXGGXKKXFXGXXGGXXXXXXXXXXGXKXXXXXXXXFFFXXXGGGGGGGVXXX 646
           GGGG     G   K   G  GG          G                GGGGGGG    
Sbjct: 44  GGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGGGKGR 103

Query: 647 KKXXXXPXGXGG 682
           K       G GG
Sbjct: 104 KGGRGGDGGSGG 115


>10_07_0115 - 13008835-13008877,13009117-13010621
          Length = 515

 Score = 24.6 bits (51), Expect(2) = 9.6
 Identities = 9/13 (69%), Positives = 9/13 (69%)
 Frame = +2

Query: 596 FFFXXXGGGGGGG 634
           F F   GGGGGGG
Sbjct: 144 FLFSGSGGGGGGG 156



 Score = 22.6 bits (46), Expect(2) = 9.6
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +2

Query: 614 GGGGGGGV 637
           GGGGGGGV
Sbjct: 153 GGGGGGGV 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,242,389
Number of Sequences: 37544
Number of extensions: 188485
Number of successful extensions: 4117
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3764
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4353229848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)