Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I09.2
         (1282 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694...   221   1e-57
07_03_1373 - 26110436-26110584,26110585-26110752,26110829-261108...   108   1e-23
08_02_0801 + 21349434-21349438,21349952-21349978,21351175-213512...    93   4e-19
04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965...    31   1.5  
03_05_0058 + 20356902-20356928,20357328-20357786,20357888-203581...    29   6.0  

>06_01_0903 -
           6939672-6939782,6940051-6940110,6940221-6940322,
           6940464-6940513,6940686-6940750,6940849-6940931,
           6941117-6941140,6941798-6941856,6942041-6942174,
           6942823-6942884,6942908-6942976
          Length = 272

 Score =  221 bits (540), Expect = 1e-57
 Identities = 102/246 (41%), Positives = 157/246 (63%), Gaps = 1/246 (0%)
 Frame = +3

Query: 111 NKLKSSQRDKVKKFVAFTQTSESTAIYCLSQNDWKLDLASDNYFQNPDAYYKDSIKTSVD 290
           +KL    RDKV++F+  T  SE  A+  L  +DW L+ A D ++  P     +S      
Sbjct: 24  HKLGRGSRDKVQQFMTITGASEKVALQALKASDWHLEGAFDFFYSQPQISLTNS------ 77

Query: 291 RKKLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPESILVLIIAWKCKAAVQCEFTKDE 470
            + LE L+N+Y++  ++D I  +GV +F  DL + P+ I++L+I+W  KAA  CEFT+ E
Sbjct: 78  -RHLEDLYNRYKEP-DVDMIMVEGVSQFCTDLQVDPQDIVMLVISWHMKAATMCEFTRQE 135

Query: 471 FIMGMVELAVDGLDKLKAKLPTLESELKDLNKFKDFYHFTFNYAKNAGQKGLDLDMAIVY 650
           FI G+  + VD ++KL+ KLP+L +E+KD +KF++ Y+F F +A+  GQK L L+ A+  
Sbjct: 136 FIGGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWAREKGQKSLALETALGM 195

Query: 651 WNIVLRGR-FKFLDAWCKFLTEHHKRSIPKDTWNLLLDFATQIDDGMSNYDAEGAWPVLI 827
           W ++   R +  +D WC+FL   H ++I +DTW+ LL+F   ID  +SNYD EGAWP LI
Sbjct: 196 WQLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDPQLSNYDEEGAWPYLI 255

Query: 828 DDFVEW 845
           D+FVE+
Sbjct: 256 DEFVEY 261


>07_03_1373 -
           26110436-26110584,26110585-26110752,26110829-26110896,
           26111755-26111800,26111929-26112025,26112802-26112884,
           26112987-26113062,26113147-26113195,26113517-26113601,
           26114247-26114331
          Length = 301

 Score =  108 bits (259), Expect = 1e-23
 Identities = 53/145 (36%), Positives = 86/145 (59%), Gaps = 8/145 (5%)
 Frame = +3

Query: 480 GMVELA--VDGLDKLK----AKLPTLES--ELKDLNKFKDFYHFTFNYAKNAGQKGLDLD 635
           G+ EL+  +DG++ L+    + +P L S  +L D ++F  FY F F  ++  GQK + + 
Sbjct: 42  GLAELSQVIDGMEGLRDAIFSDIPKLMSALDLDDAHRFSIFYDFVFFISRENGQKNISVQ 101

Query: 636 MAIVYWNIVLRGRFKFLDAWCKFLTEHHKRSIPKDTWNLLLDFATQIDDGMSNYDAEGAW 815
            A+  W +VL GRF  LD WC F+ ++ + +I +D W  LL F+  +++ +  YD +GAW
Sbjct: 102 RAVGAWRMVLNGRFWLLDRWCNFVEKYQRYNITEDVWQQLLAFSRCVNEDLEGYDPKGAW 161

Query: 816 PVLIDDFVEWCQKQELTLDGVKALE 890
           PVL+DDFVE   +   + D   A+E
Sbjct: 162 PVLVDDFVEHMHRIYNSCDCSSAME 186


>08_02_0801 +
           21349434-21349438,21349952-21349978,21351175-21351249,
           21351333-21351369,21351469-21351552,21351821-21351881,
           21351961-21352067,21352162-21352227,21352366-21352461
          Length = 185

 Score = 93.1 bits (221), Expect = 4e-19
 Identities = 52/175 (29%), Positives = 92/175 (52%), Gaps = 4/175 (2%)
 Frame = +3

Query: 348 ITADGVMKFLEDLNLSPESILVLIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKLKAK 527
           I+ +G+      L +    + +L++AWK     Q  FT DE+  G+  L  D ++KLK  
Sbjct: 10  ISPEGIETLCSHLEVPHTDVRILMLAWKMGCEKQGYFTLDEWRSGLKALRADTINKLKKA 69

Query: 528 LPTLESELKDLNKFKDFYHFTFNYAKNAGQKG-LDLDMAIVYWNIVLRGRFK-FLDAWCK 701
            P L  E+   + F+DFY + F Y     +K  +++ +A    N+VL  +F+  +D    
Sbjct: 70  FPELVQEVTRPSNFQDFYPYAFRYCLTEDKKKCIEIPVACELLNLVLGLQFRPQVDKLVN 129

Query: 702 FLTEHHK-RSIPKDTWNLLLDFATQID-DGMSNYDAEGAWPVLIDDFVEWCQKQE 860
           +L    + + I  D W   L F  +I+   + NYD++ AWP+++D+FVEW ++ +
Sbjct: 130 YLKHQSEYKVINMDQWMGFLRFCNEINFPSLDNYDSDLAWPLILDNFVEWLRENK 184


>04_04_0677 +
           27195264-27195291,27196034-27196271,27196350-27196500,
           27196578-27196972,27197270-27197339,27197414-27197696,
           27197972-27198297,27198409-27199368
          Length = 816

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
 Frame = -2

Query: 291 YPLRFLWNLCSTHR-GFGSNCRWPDLISNRFVRDNILLC 178
           YPL    ++C+T+  G  SNC+ PD+     V+  +++C
Sbjct: 397 YPLALADDVCNTNSTGGSSNCQDPDVFIRSLVQGKVIIC 435


>03_05_0058 +
           20356902-20356928,20357328-20357786,20357888-20358169,
           20358188-20358505
          Length = 361

 Score = 29.5 bits (63), Expect = 6.0
 Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
 Frame = +3

Query: 63  EIAEKVXRNXENPVKMNKLKSSQRDKVKKFVAFTQTSESTAIYCLSQN-DWKLDLASDNY 239
           ++ EK+ RN  N V +N+   S  D +    A  +T  +     +S+  D     +++++
Sbjct: 12  KLIEKLTRNGRNAVAINEHIFSTVDGIIGTFALGETYAAEEFKDISETMDLLSSSSAEDF 71

Query: 240 FQNPDA-YYKDSIKTSVDRK-----KLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPE 401
           F    A    D +     R+     KL++ F +  DQ            +   D   S  
Sbjct: 72  FPGSVAGRLVDRLTGLAARREAIFRKLDRFFERIVDQHAAADDDGPAAARRKADDKGSAG 131

Query: 402 SILV--LIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKLKAKLPTLESEL 551
           S LV  LI  WK +   +  FTKD     +++  V G+      L    SEL
Sbjct: 132 SDLVHELIDLWKMEGNTKQGFTKDHVKAMLLDTFVGGITTTSVTLHWAMSEL 183


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,219,363
Number of Sequences: 37544
Number of extensions: 457812
Number of successful extensions: 1265
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1230
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1262
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3980760984
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)