Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_I09.2
(1282 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc fi... 27 0.46
DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2 pr... 24 2.5
AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice... 24 3.3
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 3.3
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 23 5.7
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 7.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 22 10.0
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 22 10.0
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 22 10.0
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 22 10.0
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 22 10.0
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 22 10.0
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 22 10.0
>AB208106-1|BAE72138.1| 111|Apis mellifera Broad complex zinc
finger domain-Z1 isoform protein.
Length = 111
Score = 26.6 bits (56), Expect = 0.46
Identities = 22/84 (26%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Frame = +3
Query: 111 NKLKSSQRDKVKKFVAFTQTSESTAIYCLSQNDWKLDLASDNYFQNPDA-YYKDSIKTSV 287
NK+ +S ++++ + T S C N K +S N +N + Y++ K
Sbjct: 9 NKILTSLT-RLRRHIQNVHTRPSKEPIC---NICKRVYSSLNSLRNHKSIYHRQHSKNEQ 64
Query: 288 DRKKLEQLFNKYRDQQE-LDKITA 356
RK++EQ+ + R+Q+E D++T+
Sbjct: 65 QRKEMEQMREREREQREHSDRVTS 88
>DQ485319-1|ABF21078.1| 175|Apis mellifera icarapin variant 2
precursor protein.
Length = 175
Score = 24.2 bits (50), Expect = 2.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 651 WNIVLRGRFKFLDAWCKFLTEHHKR 725
WN +LR F LD W + L H K+
Sbjct: 28 WNTLLRPNF--LDGWYQTLQTHMKK 50
>AY268031-1|AAP23056.1| 810|Apis mellifera dorsal protein splice
variant B protein.
Length = 810
Score = 23.8 bits (49), Expect = 3.3
Identities = 12/42 (28%), Positives = 25/42 (59%)
Frame = -1
Query: 559 KSFNSDSNVGNLAFNLSNPSTANSTMPIINSSLVNSHCTAAL 434
+S S + GN+++ +N ++ NS + I +SLV++ +L
Sbjct: 712 ESTQSLTTTGNVSYLTTNNTSNNSQLQIPRASLVSTTSVKSL 753
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.8 bits (49), Expect = 3.3
Identities = 13/45 (28%), Positives = 20/45 (44%)
Frame = +3
Query: 201 QNDWKLDLASDNYFQNPDAYYKDSIKTSVDRKKLEQLFNKYRDQQ 335
QND+ +D +S + F + Y + D+K E L QQ
Sbjct: 945 QNDYIVDESSSSSFYSSFLYKSSESSCNPDQKPTEYLLEDSMKQQ 989
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 23.0 bits (47), Expect = 5.7
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +2
Query: 713 APQKIYTKRHMESFTRLCNTNRRWH 787
AP ++ T+ ES LCNT WH
Sbjct: 453 APPQLPTE---ESVDALCNTLHHWH 474
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.6 bits (46), Expect = 7.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIVSSLSNNYNYS 92
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 22.2 bits (45), Expect = 10.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = +2
Query: 356 RRGHEILRRPKLKSRINFSFNYS 424
RR E + PK+ S ++ ++NYS
Sbjct: 70 RRERERSKEPKIISSLSNNYNYS 92
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 257,280
Number of Sequences: 438
Number of extensions: 5061
Number of successful extensions: 18
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 43943058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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