Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_I07.2
(1313 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC050029-1|AAH50029.1| 639|Homo sapiens PARN protein protein. 241 3e-63
AJ005698-1|CAA06683.1| 639|Homo sapiens poly(A)-specific ribonu... 241 3e-63
AL139045-1|CAM27947.1| 531|Homo sapiens poly(A)-specific ribonu... 127 1e-28
AK093139-1|BAC04070.1| 531|Homo sapiens protein ( Homo sapiens ... 127 1e-28
BC112246-1|AAI12247.1| 520|Homo sapiens poly(A)-specific ribonu... 110 1e-23
AL139045-2|CAI19750.2| 520|Homo sapiens poly(A)-specific ribonu... 110 1e-23
AK097559-1|BAC05101.1| 520|Homo sapiens protein ( Homo sapiens ... 110 1e-23
CR457320-1|CAG33601.1| 510|Homo sapiens TOE1 protein. 48 1e-04
BC009364-1|AAH09364.1| 510|Homo sapiens target of EGR1, member ... 48 1e-04
AY169960-1|AAN75441.1| 510|Homo sapiens target of Egr1 protein ... 48 1e-04
AL359540-11|CAI21722.1| 510|Homo sapiens target of EGR1, member... 48 1e-04
AK024011-1|BAB14774.1| 510|Homo sapiens protein ( Homo sapiens ... 48 1e-04
BC042672-1|AAH42672.1| 486|Homo sapiens coiled-coil domain cont... 37 0.19
BC022020-1|AAH22020.2| 486|Homo sapiens coiled-coil domain cont... 37 0.19
AL391839-5|CAH70456.1| 486|Homo sapiens coiled-coil domain cont... 37 0.19
AL354750-3|CAI39706.1| 486|Homo sapiens coiled-coil domain cont... 37 0.19
AK058148-1|BAB71686.1| 358|Homo sapiens protein ( Homo sapiens ... 37 0.19
AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein. 33 3.1
AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein varian... 33 3.1
AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein. 33 3.1
L41560-1|AAA69662.1| 104|Homo sapiens pterin-4a-carbinolamine d... 31 9.3
L41559-1|AAA69663.1| 104|Homo sapiens pterin-4a-carbinolamine d... 31 9.3
CR542194-1|CAG46991.1| 104|Homo sapiens PCBD protein. 31 9.3
BC006324-1|AAH06324.1| 104|Homo sapiens pterin-4 alpha-carbinol... 31 9.3
AF082858-1|AAD25732.1| 104|Homo sapiens pterin carbinolamine de... 31 9.3
>BC050029-1|AAH50029.1| 639|Homo sapiens PARN protein protein.
Length = 639
Score = 241 bits (591), Expect = 3e-63
Identities = 124/317 (39%), Positives = 192/317 (60%), Gaps = 17/317 (5%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSM----FDTPEEYYKCTQKG 340
+E+ R NFK+ L V +++ ADF I EF+GI +G VS FDTPEE Y+ +K
Sbjct: 1 MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH 60
Query: 341 SSEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPR--GSPGPDRMFMCQSSSLDFLASQG 514
S +FLL QFGLC F +++ + Y+ ++NFY+FP+ PD F+CQSSS+DFLASQG
Sbjct: 61 SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG 120
Query: 515 FDFNKLIKDGISYMTIPIECKLRENLTERQK--------TY---SKGKDSIKVPDEHKAF 661
FDFNK+ ++GI Y+ E +LRE E++ +Y + K + +P++ K F
Sbjct: 121 FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF 180
Query: 662 VEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKILENKNRLLN 841
++ + ++ L+ + ++++ C F R L++Q L ++ I VET E K R +
Sbjct: 181 IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV 240
Query: 842 VKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNH 1021
+ +V +++ K + K +E E+ DAVGFS+V I+ S KLV+GHNMLLDVMHT++
Sbjct: 241 ISKV-DEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQ 299
Query: 1022 FFQPXPAXYTQFKXLXT 1072
F+ P PA ++FK + T
Sbjct: 300 FYCPLPADLSEFKEMTT 316
>AJ005698-1|CAA06683.1| 639|Homo sapiens poly(A)-specific
ribonuclease protein.
Length = 639
Score = 241 bits (591), Expect = 3e-63
Identities = 124/317 (39%), Positives = 192/317 (60%), Gaps = 17/317 (5%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSM----FDTPEEYYKCTQKG 340
+E+ R NFK+ L V +++ ADF I EF+GI +G VS FDTPEE Y+ +K
Sbjct: 1 MEIIRSNFKSNLHKVYQAIEEADFFAIDGEFSGISDGPSVSALTNGFDTPEERYQKLKKH 60
Query: 341 SSEFLLIQFGLCAFHWNHKEKHYMNDAYNFYLFPR--GSPGPDRMFMCQSSSLDFLASQG 514
S +FLL QFGLC F +++ + Y+ ++NFY+FP+ PD F+CQSSS+DFLASQG
Sbjct: 61 SMDFLLFQFGLCTFKYDYTDSKYITKSFNFYVFPKPFNRSSPDVKFVCQSSSIDFLASQG 120
Query: 515 FDFNKLIKDGISYMTIPIECKLRENLTERQK--------TY---SKGKDSIKVPDEHKAF 661
FDFNK+ ++GI Y+ E +LRE E++ +Y + K + +P++ K F
Sbjct: 121 FDFNKVFRNGIPYLNQEEERQLREQYDEKRSQANGAGALSYVSPNTSKCPVTIPEDQKKF 180
Query: 662 VEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKILENKNRLLN 841
++ + ++ L+ + ++++ C F R L++Q L ++ I VET E K R +
Sbjct: 181 IDQVVEKIEDLLQSEENKNLDLEPCTGFQRKLIYQTLSWKYPKGIHVETLETEKKERYIV 240
Query: 842 VKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNH 1021
+ +V +++ K + K +E E+ DAVGFS+V I+ S KLV+GHNMLLDVMHT++
Sbjct: 241 ISKV-DEEERKRREQQKHAKEQEELNDAVGFSRVIHAIANSGKLVIGHNMLLDVMHTVHQ 299
Query: 1022 FFQPXPAXYTQFKXLXT 1072
F+ P PA ++FK + T
Sbjct: 300 FYCPLPADLSEFKEMTT 316
>AL139045-1|CAM27947.1| 531|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 531
Score = 127 bits (306), Expect = 1e-28
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 9/305 (2%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGI---ING-RDVSMFDTPEEYYKCTQKG 340
++V F+ +LPL+ V+ ADF+ + EFTG+ ++G + +S+FD P E+Y T++
Sbjct: 1 MDVGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS 60
Query: 341 SSEFLLIQFGLCAFHWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGF 517
+F + Q GL F E + Y+ + NFYLFP D F Q+SS+ FL GF
Sbjct: 61 VQQFTVCQIGLSVFSAIEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGF 120
Query: 518 DFNKLIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFL 697
++NK +K+GI YM E K+R ++ D D+ K ++++ + +
Sbjct: 121 NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDK----DQIKVVIDEVTRWL-ELA 175
Query: 698 EEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKILENKNRLLNVKRVKSQDD--L 871
+EG D M + F + LR + + T + K+ + VK+V Q L
Sbjct: 176 KEG--DWMTLPGITGFQAFEVQLVLRQALPN---IWTVL---KDEGVVVKKVSKQHRWYL 227
Query: 872 KNHDALKKEREWED--FEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNHFFQPXPAX 1045
+N + +E W++ A GFS +M+ +++K +VGHNM++D++H FF+P P
Sbjct: 228 QN-TSCDRESCWKENILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPES 286
Query: 1046 YTQFK 1060
Y QFK
Sbjct: 287 YDQFK 291
>AK093139-1|BAC04070.1| 531|Homo sapiens protein ( Homo sapiens cDNA
FLJ35820 fis, clone TESTI2006212, weakly similar to
Poly(A)-specific ribonuclease (deadenylation nuclease).
).
Length = 531
Score = 127 bits (306), Expect = 1e-28
Identities = 94/305 (30%), Positives = 157/305 (51%), Gaps = 9/305 (2%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGI---ING-RDVSMFDTPEEYYKCTQKG 340
++V F+ +LPL+ V+ ADF+ + EFTG+ ++G + +S+FD P E+Y T++
Sbjct: 1 MDVGADEFEESLPLLQELVQEADFVGLDIEFTGLRSNLSGPQQISLFDLPSEWYLKTRQS 60
Query: 341 SSEFLLIQFGLCAFHWNHKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGF 517
+F + Q GL F E + Y+ + NFYLFP D F Q+SS+ FL GF
Sbjct: 61 VQQFTVCQIGLSVFSAIEGEANKYIAHSCNFYLFPTTFGILDSEFSFQASSVQFLNQYGF 120
Query: 518 DFNKLIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFL 697
++NK +K+GI YM E K+R ++ D D+ K ++++ + +
Sbjct: 121 NYNKFLKNGIPYMNEEQEKKIRHDILTGNWRVRSSPDK----DQIKVVIDEVTRWL-ELA 175
Query: 698 EEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKILENKNRLLNVKRVKSQDD--L 871
+EG D M + F + LR + + T + K+ + VK+V Q L
Sbjct: 176 KEG--DWMTLPGITGFQAFEVQLVLRQALPN---IWTVL---KDEGVVVKKVSKQHRWYL 227
Query: 872 KNHDALKKEREWED--FEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNHFFQPXPAX 1045
+N + +E W++ A GFS +M+ +++K +VGHNM++D++H FF+P P
Sbjct: 228 QN-TSCDRESCWKENILLSARGFSVFFQMLVKAQKPLVGHNMMMDLLHLHEKFFRPLPES 286
Query: 1046 YTQFK 1060
Y QFK
Sbjct: 287 YDQFK 291
>BC112246-1|AAI12247.1| 520|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 520
Score = 110 bits (264), Expect = 1e-23
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 9/276 (3%)
Frame = +2
Query: 260 EFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMNDAY 424
EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+ +
Sbjct: 19 EFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIAHSC 78
Query: 425 NFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTIPIECKLRENLTERQ 604
NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R ++
Sbjct: 79 NFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDILTGN 138
Query: 605 KTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARF 784
D D+ K ++++ + + +EG D M + F + LR
Sbjct: 139 WRVRSSPDK----DQIKVVIDEVTRWL-ELAKEG--DWMTLPGITGFQAFEVQLVLRQAL 191
Query: 785 KDKILVETKILENKNRLLNVKRVKSQDD--LKNHDALKKEREWED--FEDAVGFSKVARM 952
+ + T + K+ + VK+V Q L+N + +E W++ A GFS +M
Sbjct: 192 PN---IWTVL---KDEGVVVKKVSKQHRWYLQN-TSCDRESCWKENILLSARGFSVFFQM 244
Query: 953 ISESEKLVVGHNMLLDVMHTLNHFFQPXPAXYTQFK 1060
+ +++K +VGHNM++D++H FF+P P Y QFK
Sbjct: 245 LVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFK 280
>AL139045-2|CAI19750.2| 520|Homo sapiens poly(A)-specific
ribonuclease (PARN)-like domain containing 1 protein.
Length = 520
Score = 110 bits (264), Expect = 1e-23
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 9/276 (3%)
Frame = +2
Query: 260 EFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMNDAY 424
EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+ +
Sbjct: 19 EFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIAHSC 78
Query: 425 NFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTIPIECKLRENLTERQ 604
NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R ++
Sbjct: 79 NFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDILTGN 138
Query: 605 KTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARF 784
D D+ K ++++ + + +EG D M + F + LR
Sbjct: 139 WRVRSSPDK----DQIKVVIDEVTRWL-ELAKEG--DWMTLPGITGFQAFEVQLVLRQAL 191
Query: 785 KDKILVETKILENKNRLLNVKRVKSQDD--LKNHDALKKEREWED--FEDAVGFSKVARM 952
+ + T + K+ + VK+V Q L+N + +E W++ A GFS +M
Sbjct: 192 PN---IWTVL---KDEGVVVKKVSKQHRWYLQN-TSCDRESCWKENILLSARGFSVFFQM 244
Query: 953 ISESEKLVVGHNMLLDVMHTLNHFFQPXPAXYTQFK 1060
+ +++K +VGHNM++D++H FF+P P Y QFK
Sbjct: 245 LVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFK 280
>AK097559-1|BAC05101.1| 520|Homo sapiens protein ( Homo sapiens cDNA
FLJ40240 fis, clone TESTI2023752. ).
Length = 520
Score = 110 bits (264), Expect = 1e-23
Identities = 85/276 (30%), Positives = 140/276 (50%), Gaps = 9/276 (3%)
Frame = +2
Query: 260 EFTGI---ING-RDVSMFDTPEEYYKCTQKGSSEFLLIQFGLCAFHWNHKEKH-YMNDAY 424
EFTG+ ++G + +S+FD P E+Y T++ +F + Q GL F E + Y+ +
Sbjct: 19 EFTGLRSNLSGPQQISLFDLPSEWYLKTRQSVQQFTVCQIGLSVFSAIEGEANKYIAHSC 78
Query: 425 NFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIKDGISYMTIPIECKLRENLTERQ 604
NFYLFP D F Q+SS+ FL GF++NK +K+GI YM E K+R ++
Sbjct: 79 NFYLFPTTFGILDSEFSFQASSVQFLNQYGFNYNKFLKNGIPYMNEEQEKKIRHDILTGN 138
Query: 605 KTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARF 784
D D+ K ++++ + + +EG D M + F + LR
Sbjct: 139 WRVRSSPDK----DQIKVVIDEVTRWL-ELAKEG--DWMTLPGITGFQAFEVQLVLRQAL 191
Query: 785 KDKILVETKILENKNRLLNVKRVKSQDD--LKNHDALKKEREWED--FEDAVGFSKVARM 952
+ + T + K+ + VK+V Q L+N + +E W++ A GFS +M
Sbjct: 192 PN---IWTVL---KDEGVVVKKVSKQHRWYLQN-TSCDRESCWKENILLSARGFSVFFQM 244
Query: 953 ISESEKLVVGHNMLLDVMHTLNHFFQPXPAXYTQFK 1060
+ +++K +VGHNM++D++H FF+P P Y QFK
Sbjct: 245 LVKAQKPLVGHNMMMDLLHLHEKFFRPLPESYDQFK 280
>CR457320-1|CAG33601.1| 510|Homo sapiens TOE1 protein.
Length = 510
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
++V NFK P + ++K A+F+ + TE +G+ R + EE YK +
Sbjct: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGL-GDRKSLLNQCIEERYKAVCHAARTR 95
Query: 353 LLIQFGLCAFHWN-HKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFN 526
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN
Sbjct: 96 SILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEE------YVIEPKSVQFLIQHGFNFN 149
Query: 527 KLIKDGISY 553
+ GI Y
Sbjct: 150 QQYAQGIPY 158
>BC009364-1|AAH09364.1| 510|Homo sapiens target of EGR1, member 1
(nuclear) protein.
Length = 510
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
++V NFK P + ++K A+F+ + TE +G+ R + EE YK +
Sbjct: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGL-GDRKSLLNQCIEERYKAVCHAARTR 95
Query: 353 LLIQFGLCAFHWN-HKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFN 526
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN
Sbjct: 96 SILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEE------YVIEPKSVQFLIQHGFNFN 149
Query: 527 KLIKDGISY 553
+ GI Y
Sbjct: 150 QQYAQGIPY 158
>AY169960-1|AAN75441.1| 510|Homo sapiens target of Egr1 protein
protein.
Length = 510
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
++V NFK P + ++K A+F+ + TE +G+ R + EE YK +
Sbjct: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGL-GDRKSLLNQCIEERYKAVCHAARTR 95
Query: 353 LLIQFGLCAFHWN-HKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFN 526
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN
Sbjct: 96 SILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEE------YVIEPKSVQFLIQHGFNFN 149
Query: 527 KLIKDGISY 553
+ GI Y
Sbjct: 150 QQYAQGIPY 158
>AL359540-11|CAI21722.1| 510|Homo sapiens target of EGR1, member 1
(nuclear) protein.
Length = 510
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
++V NFK P + ++K A+F+ + TE +G+ R + EE YK +
Sbjct: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGL-GDRKSLLNQCIEERYKAVCHAARTR 95
Query: 353 LLIQFGLCAFHWN-HKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFN 526
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN
Sbjct: 96 SILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEE------YVIEPKSVQFLIQHGFNFN 149
Query: 527 KLIKDGISY 553
+ GI Y
Sbjct: 150 QQYAQGIPY 158
>AK024011-1|BAB14774.1| 510|Homo sapiens protein ( Homo sapiens
cDNA FLJ13949 fis, clone Y79AA1001041. ).
Length = 510
Score = 47.6 bits (108), Expect = 1e-04
Identities = 34/129 (26%), Positives = 57/129 (44%), Gaps = 2/129 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
++V NFK P + ++K A+F+ + TE +G+ R + EE YK +
Sbjct: 37 VDVQSNNFKEMWPSLLLAIKTANFVAVDTELSGL-GDRKSLLNQCIEERYKAVCHAARTR 95
Query: 353 LLIQFGLCAFHWN-HKEKH-YMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFN 526
++ GL F K +H Y+ +N L ++ + S+ FL GF+FN
Sbjct: 96 SILSLGLACFKRQPDKGEHSYLAQVFNLTLLCMEE------YVIEPKSVQFLIQHGFNFN 149
Query: 527 KLIKDGISY 553
+ GI Y
Sbjct: 150 QQYAQGIPY 158
>BC042672-1|AAH42672.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.19
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = +2
Query: 632 IKVPDEHKAFVEDICNQVHQFLEEGQLDEMEID-KCNSFVRLLLFQELRARFKDKILVET 808
+KV + +E N Q L + + +M+ D + S +L+L EL+ + KDK +T
Sbjct: 279 LKVFENQANMLERAVND--QVLLDAEYKQMQCDFQLLSEEKLVLENELQ-KLKDK--EKT 333
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKK---EREWEDFEDAVGFSKVARMISESEKLVV 979
K N+ + VK VK +D K+ D+ KK E+E++ ED KVAR+ E++ L
Sbjct: 334 KPTNNRTKKA-VKTVKKKDKGKSEDSEKKMSPEKEFKIKEDLDQVQKVARLEIENKVLQE 392
Query: 980 GHNMLLD----VMHTLNHF 1024
L H LN+F
Sbjct: 393 QLKQALQEAEKAKHQLNYF 411
>BC022020-1|AAH22020.2| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.19
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = +2
Query: 632 IKVPDEHKAFVEDICNQVHQFLEEGQLDEMEID-KCNSFVRLLLFQELRARFKDKILVET 808
+KV + +E N Q L + + +M+ D + S +L+L EL+ + KDK +T
Sbjct: 279 LKVFENQANMLERAVND--QVLLDAEYKQMQCDFQLLSEEKLVLENELQ-KLKDK--EKT 333
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKK---EREWEDFEDAVGFSKVARMISESEKLVV 979
K N+ + VK VK +D K+ D+ KK E+E++ ED KVAR+ E++ L
Sbjct: 334 KPTNNRTKKA-VKTVKKKDKGKSEDSEKKMSPEKEFKIKEDLDQVQKVARLEIENKVLQE 392
Query: 980 GHNMLLD----VMHTLNHF 1024
L H LN+F
Sbjct: 393 QLKQALQEAEKAKHQLNYF 411
>AL391839-5|CAH70456.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.19
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = +2
Query: 632 IKVPDEHKAFVEDICNQVHQFLEEGQLDEMEID-KCNSFVRLLLFQELRARFKDKILVET 808
+KV + +E N Q L + + +M+ D + S +L+L EL+ + KDK +T
Sbjct: 279 LKVFENQANMLERAVND--QVLLDAEYKQMQCDFQLLSEEKLVLENELQ-KLKDK--EKT 333
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKK---EREWEDFEDAVGFSKVARMISESEKLVV 979
K N+ + VK VK +D K+ D+ KK E+E++ ED KVAR+ E++ L
Sbjct: 334 KPTNNRTKKA-VKTVKKKDKGKSEDSEKKMSPEKEFKIKEDLDQVQKVARLEIENKVLQE 392
Query: 980 GHNMLLD----VMHTLNHF 1024
L H LN+F
Sbjct: 393 QLKQALQEAEKAKHQLNYF 411
>AL354750-3|CAI39706.1| 486|Homo sapiens coiled-coil domain
containing 7 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.19
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = +2
Query: 632 IKVPDEHKAFVEDICNQVHQFLEEGQLDEMEID-KCNSFVRLLLFQELRARFKDKILVET 808
+KV + +E N Q L + + +M+ D + S +L+L EL+ + KDK +T
Sbjct: 279 LKVFENQANMLERAVND--QVLLDAEYKQMQCDFQLLSEEKLVLENELQ-KLKDK--EKT 333
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKK---EREWEDFEDAVGFSKVARMISESEKLVV 979
K N+ + VK VK +D K+ D+ KK E+E++ ED KVAR+ E++ L
Sbjct: 334 KPTNNRTKKA-VKTVKKKDKGKSEDSEKKMSPEKEFKIKEDLDQVQKVARLEIENKVLQE 392
Query: 980 GHNMLLD----VMHTLNHF 1024
L H LN+F
Sbjct: 393 QLKQALQEAEKAKHQLNYF 411
>AK058148-1|BAB71686.1| 358|Homo sapiens protein ( Homo sapiens cDNA
FLJ25419 fis, clone TST03533. ).
Length = 358
Score = 36.7 bits (81), Expect = 0.19
Identities = 43/139 (30%), Positives = 68/139 (48%), Gaps = 8/139 (5%)
Frame = +2
Query: 632 IKVPDEHKAFVEDICNQVHQFLEEGQLDEMEID-KCNSFVRLLLFQELRARFKDKILVET 808
+KV + +E N Q L + + +M+ D + S +L+L EL+ + KDK +T
Sbjct: 151 LKVFENQANMLERAVND--QVLLDAEYKQMQCDFQLLSEEKLVLENELQ-KLKDK--EKT 205
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKK---EREWEDFEDAVGFSKVARMISESEKLVV 979
K N+ + VK VK +D K+ D+ KK E+E++ ED KVAR+ E++ L
Sbjct: 206 KPTNNRTKKA-VKTVKKKDKGKSEDSEKKMSPEKEFKIKEDLDQVQKVARLEIENKVLQE 264
Query: 980 GHNMLLD----VMHTLNHF 1024
L H LN+F
Sbjct: 265 QLKQALQEAEKAKHQLNYF 283
>AY884293-1|AAX84184.1| 1117|Homo sapiens cytospin A protein.
Length = 1117
Score = 32.7 bits (71), Expect = 3.1
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Frame = +2
Query: 578 LRENLTERQKTYSKGKDSI-KVPDEHKAFVEDICNQVHQF---LEE--GQLDEMEIDKCN 739
L+E+L + ++ +D+I KV DE++AF E+ Q+ LE+ LDE E ++ +
Sbjct: 626 LQEDLAHTRNDANRLQDAIAKVEDEYRAFQEEAKKQIEDLNMTLEKLRSDLDEKETERSD 685
Query: 740 SFVRLL-----LFQELRARFKDKILVETKILENKNRLLNVKRVKSQDDLKN-HDALKKE- 898
+ + Q + D +++ LEN + L ++ + ++K H L++E
Sbjct: 686 MKETIFELEDEVEQHRAVKLHDNLIISD--LENTVKKLQDQKHDMEREIKTLHRRLREES 743
Query: 899 REWEDFE 919
EW F+
Sbjct: 744 AEWRQFQ 750
>AB209022-1|BAD92259.1| 939|Homo sapiens KIAA0376 protein variant
protein.
Length = 939
Score = 32.7 bits (71), Expect = 3.1
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Frame = +2
Query: 578 LRENLTERQKTYSKGKDSI-KVPDEHKAFVEDICNQVHQF---LEE--GQLDEMEIDKCN 739
L+E+L + ++ +D+I KV DE++AF E+ Q+ LE+ LDE E ++ +
Sbjct: 654 LQEDLAHTRNDANRLQDAIAKVEDEYRAFQEEAKKQIEDLNMTLEKLRSDLDEKETERSD 713
Query: 740 SFVRLL-----LFQELRARFKDKILVETKILENKNRLLNVKRVKSQDDLKN-HDALKKE- 898
+ + Q + D +++ LEN + L ++ + ++K H L++E
Sbjct: 714 MKETIFELEDEVEQHRAVKLHDNLIISD--LENTVKKLQDQKHDMEREIKTLHRRLREES 771
Query: 899 REWEDFE 919
EW F+
Sbjct: 772 AEWRQFQ 778
>AB002374-1|BAA21574.1| 885|Homo sapiens KIAA0376 protein.
Length = 885
Score = 32.7 bits (71), Expect = 3.1
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Frame = +2
Query: 578 LRENLTERQKTYSKGKDSI-KVPDEHKAFVEDICNQVHQF---LEE--GQLDEMEIDKCN 739
L+E+L + ++ +D+I KV DE++AF E+ Q+ LE+ LDE E ++ +
Sbjct: 470 LQEDLAHTRNDANRLQDAIAKVEDEYRAFQEEAKKQIEDLNMTLEKLRSDLDEKETERSD 529
Query: 740 SFVRLL-----LFQELRARFKDKILVETKILENKNRLLNVKRVKSQDDLKN-HDALKKE- 898
+ + Q + D +++ LEN + L ++ + ++K H L++E
Sbjct: 530 MKETIFELEDEVEQHRAVKLHDNLIISD--LENTVKKLQDQKHDMEREIKTLHRRLREES 587
Query: 899 REWEDFE 919
EW F+
Sbjct: 588 AEWRQFQ 594
>L41560-1|AAA69662.1| 104|Homo sapiens pterin-4a-carbinolamine
dehydratase protein.
Length = 104
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 818 ENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKL 973
E +++LL R ++L+ DA+ K+ ++DF A GF + R+ ++EKL
Sbjct: 11 EERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGF--MTRVALQAEKL 60
>L41559-1|AAA69663.1| 104|Homo sapiens pterin-4a-carbinolamine
dehydratase protein.
Length = 104
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 818 ENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKL 973
E +++LL R ++L+ DA+ K+ ++DF A GF + R+ ++EKL
Sbjct: 11 EERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGF--MTRVALQAEKL 60
>CR542194-1|CAG46991.1| 104|Homo sapiens PCBD protein.
Length = 104
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 818 ENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKL 973
E +++LL R ++L+ DA+ K+ ++DF A GF + R+ ++EKL
Sbjct: 11 EERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGF--MTRVALQAEKL 60
>BC006324-1|AAH06324.1| 104|Homo sapiens pterin-4
alpha-carbinolamine dehydratase/dimerization cofactor of
hepatocyte nu protein.
Length = 104
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 818 ENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKL 973
E +++LL R ++L+ DA+ K+ ++DF A GF + R+ ++EKL
Sbjct: 11 EERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGF--MTRVALQAEKL 60
>AF082858-1|AAD25732.1| 104|Homo sapiens pterin carbinolamine
dehydratase protein.
Length = 104
Score = 31.1 bits (67), Expect = 9.3
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = +2
Query: 818 ENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKL 973
E +++LL R ++L+ DA+ K+ ++DF A GF + R+ ++EKL
Sbjct: 11 EERDQLLPNLRAVGWNELEGRDAIFKQFHFKDFNRAFGF--MTRVALQAEKL 60
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 134,636,582
Number of Sequences: 237096
Number of extensions: 2617314
Number of successful extensions: 9491
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 9242
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9477
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18990949350
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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