Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_I07.2
(1313 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical pr... 85 1e-16
AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical... 59 8e-09
AF067622-4|ABD63224.1| 338|Caenorhabditis elegans Hypothetical ... 32 1.0
AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical ... 32 1.0
Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical pr... 30 3.2
Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical pr... 30 4.2
Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical pr... 29 5.5
U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated p... 29 5.5
U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated p... 29 5.5
AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin... 29 5.5
AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectr... 29 5.5
AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectr... 29 5.5
U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical pr... 29 9.6
U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical p... 29 9.6
AF025461-6|AAK84545.1| 335|Caenorhabditis elegans Hypothetical ... 29 9.6
>Z74474-1|CAA98954.2| 566|Caenorhabditis elegans Hypothetical protein
K10C8.1 protein.
Length = 566
Score = 85.0 bits (201), Expect = 1e-16
Identities = 85/307 (27%), Positives = 131/307 (42%), Gaps = 13/307 (4%)
Frame = +2
Query: 179 VXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEFLL 358
V NF A + + DF+ I EF G+ + +S+ DT E Y+ + ++
Sbjct: 4 VTDSNFLDAAGTLRKGLLYCDFVAIDFEFLGL-DVSAISLHDTVESRYQILRDNVIKYRP 62
Query: 359 IQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKLIK 538
Q GL F + Y D Y+ LF R + + S+ FL F+ N++
Sbjct: 63 CQLGLTLFK-QKSNRAYKADTYSVPLFQRFGDNDTSISL---PSMRFLVKNKFNLNQVFM 118
Query: 539 DGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQLDE 718
DG+ + T K L ++ + K V + C Q + + DE
Sbjct: 119 DGVEFCTRKEFKKFERALLAGTAASYLSREVKSQIELLKVMVHEKCYQSTSYHITHRTDE 178
Query: 719 --MEID---KCNSFVRLLLFQELRARFKDKILVE-TKIL-------ENKNRLLNVKRVKS 859
+I K NS V L + + L + K I+ E TK + K + L+VK + S
Sbjct: 179 PMQKIPLKMKPNSSVSLRMPRNLSSVEKYMIIYELTKAFPQFLFTCDEKQQNLHVKNI-S 237
Query: 860 QDDLKNHDALKKEREWEDFEDAVGFSKVARMISESEKLVVGHNMLLDVMHTLNHFFQPXP 1039
D LK D L++ R E G S + +++ + KLVVGHN LLD M+ ++FF P
Sbjct: 238 DDYLKEKDNLERARA-RCSESVKGVSAILQVVHMTGKLVVGHNSLLDAMYMYHYFFSHLP 296
Query: 1040 AXYTQFK 1060
A Y FK
Sbjct: 297 ANYQMFK 303
>AL117195-18|CAB55029.1| 490|Caenorhabditis elegans Hypothetical
protein Y57A10A.25 protein.
Length = 490
Score = 58.8 bits (136), Expect = 8e-09
Identities = 40/142 (28%), Positives = 62/142 (43%), Gaps = 2/142 (1%)
Frame = +2
Query: 173 LEVXRKNFKAALPLVAASVKXADFLVIXTEFTGIINGRDVSMFDTPEEYYKCTQKGSSEF 352
+EV R NF P + +K ADF I E +G+ G+ + D E Y +
Sbjct: 32 IEVNRDNFAKIWPYLLVCIKSADFTAIDLELSGL-GGKGLRSRDIAERYQAIRDAAHTRS 90
Query: 353 LLIQFGLCAFHWNHKEKHYMNDAYNFYLFPRGSPGPDRMFMCQSSSLDFLASQGFDFNKL 532
+L G+ HK + Y +F ++ F + S+L FLA FDFN+L
Sbjct: 91 IL-SVGIATMKLTHKSEKRRALRYETQVF-NILTFSEKPFTIEPSALQFLAKHSFDFNRL 148
Query: 533 IKDGISYM--TIPIECKLRENL 592
I+ G+ + P++ RE L
Sbjct: 149 IQSGVRFQGANCPLKTLFRELL 170
>AF067622-4|ABD63224.1| 338|Caenorhabditis elegans Hypothetical
protein F33E11.6a protein.
Length = 338
Score = 31.9 bits (69), Expect = 1.0
Identities = 24/102 (23%), Positives = 47/102 (46%)
Frame = +2
Query: 635 KVPDEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKI 814
KV E + F+E N VH+ L E L +M + + + +++ F D + K+
Sbjct: 101 KVNHEEREFLEWNFN-VHKLLNETLLRDMNAMRASE-----IHDMMQSDFGDIYMEYKKV 154
Query: 815 LENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSK 940
+ + R +++ K + +KN E + ++AV F+K
Sbjct: 155 VSQREREAQLEKAKEMEAIKNDSVKLAELRRKAVQNAVDFNK 196
>AF067622-3|ABD63225.1| 447|Caenorhabditis elegans Hypothetical
protein F33E11.6b protein.
Length = 447
Score = 31.9 bits (69), Expect = 1.0
Identities = 24/102 (23%), Positives = 47/102 (46%)
Frame = +2
Query: 635 KVPDEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDKILVETKI 814
KV E + F+E N VH+ L E L +M + + + +++ F D + K+
Sbjct: 101 KVNHEEREFLEWNFN-VHKLLNETLLRDMNAMRASE-----IHDMMQSDFGDIYMEYKKV 154
Query: 815 LENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSK 940
+ + R +++ K + +KN E + ++AV F+K
Sbjct: 155 VSQREREAQLEKAKEMEAIKNDSVKLAELRRKAVQNAVDFNK 196
>Z92777-3|CAB07169.1| 351|Caenorhabditis elegans Hypothetical
protein C17H1.5 protein.
Length = 351
Score = 30.3 bits (65), Expect = 3.2
Identities = 29/139 (20%), Positives = 63/139 (45%), Gaps = 7/139 (5%)
Frame = +2
Query: 596 ERQKTYSKGKDSIK-VPDEHKAFVEDICNQVHQFLEEGQLD--EMEIDKCN----SFVRL 754
ER+ + S++ + ++HK E + Q+ + E+G+ D ++E+ + N L
Sbjct: 67 ERKSAEEAHRKSVEQLKEKHKNETEKLETQIKEIKEKGEEDVRKVELQRANLEKQRTEAL 126
Query: 755 LLFQELRARFKDKILVETKILENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGF 934
+ E +K E + + +LNV+ +K+ L +A++ E + +D
Sbjct: 127 DIHLETMKELNEKKFEEIRQQRKEQNILNVEEMKA---LSTRNAIEHETQMGLIDDTQNM 183
Query: 935 SKVARMISESEKLVVGHNM 991
++R +S ++GH M
Sbjct: 184 I-LSRESRQSSLTLIGHMM 201
>Z92970-2|CAB07481.2| 1461|Caenorhabditis elegans Hypothetical
protein H06O01.2 protein.
Length = 1461
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +2
Query: 809 KILENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFED 922
K+LEN+N KR K QDD + ++ + + +D++D
Sbjct: 91 KLLENENYFRRSKRSKRQDDSPSDNSEESQSSEDDWDD 128
>Z75543-9|CAA99869.1| 194|Caenorhabditis elegans Hypothetical
protein K01D12.10 protein.
Length = 194
Score = 29.9 bits (64), Expect = 4.2
Identities = 18/69 (26%), Positives = 33/69 (47%)
Frame = +2
Query: 776 ARFKDKILVETKILENKNRLLNVKRVKSQDDLKNHDALKKEREWEDFEDAVGFSKVARMI 955
A+ + LV+ ++LE K + V+ +++ + + KKE + E E K A +
Sbjct: 74 AQADPEALVDQEVLEGKQEEKEEEEVEKKEEKEEEEVGKKEEKVEKKEKEEKMVKAAVEV 133
Query: 956 SESEKLVVG 982
E +VVG
Sbjct: 134 EVEEMVVVG 142
>Z81101-7|CAB03200.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +2
Query: 530 LIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQ 709
+IK+ Y T+P + + +QK ++ + I+ ++ + +++I E Q
Sbjct: 394 MIKEKSKYQTVPRNFAMTKANWSKQKELAQQRGDIREAEQIQTKIDEI---------ERQ 444
Query: 710 LDEMEIDKCNSFVRLLLFQEL-RARFKDKILV-ETKILEN 823
DE+E ++ S + R++ KD++L + KI EN
Sbjct: 445 ADELEKERSKSISAIAFINHRNRSKIKDQVLSGQLKIEEN 484
>Z70752-6|CAA94759.1| 613|Caenorhabditis elegans Hypothetical
protein F25B3.6 protein.
Length = 613
Score = 29.5 bits (63), Expect = 5.5
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Frame = +2
Query: 530 LIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFLEEGQ 709
+IK+ Y T+P + + +QK ++ + I+ ++ + +++I E Q
Sbjct: 394 MIKEKSKYQTVPRNFAMTKANWSKQKELAQQRGDIREAEQIQTKIDEI---------ERQ 444
Query: 710 LDEMEIDKCNSFVRLLLFQEL-RARFKDKILV-ETKILEN 823
DE+E ++ S + R++ KD++L + KI EN
Sbjct: 445 ADELEKERSKSISAIAFINHRNRSKIKDQVLSGQLKIEEN 484
>U64854-2|AAK77611.1| 2257|Caenorhabditis elegans Uncoordinated
protein 70, isoform a protein.
Length = 2257
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 644 DEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDK 793
D H+ ++ ICN + ++EG + +K +R +QEL+ KD+
Sbjct: 1526 DNHEPWINQICNNGQELIDEGHANGPAFEKKIQELR-SAWQELKEAVKDR 1574
>U64854-1|AAK77612.2| 2302|Caenorhabditis elegans Uncoordinated
protein 70, isoform b protein.
Length = 2302
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 644 DEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDK 793
D H+ ++ ICN + ++EG + +K +R +QEL+ KD+
Sbjct: 1526 DNHEPWINQICNNGQELIDEGHANGPAFEKKIQELR-SAWQELKEAVKDR 1574
>AF261891-1|AAF72996.1| 2257|Caenorhabditis elegans beta-spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 644 DEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDK 793
D H+ ++ ICN + ++EG + +K +R +QEL+ KD+
Sbjct: 1526 DNHEPWINQICNNGQELIDEGHANGPAFEKKIQELR-SAWQELKEAVKDR 1574
>AF166170-1|AAD49859.1| 2257|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2257
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 644 DEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDK 793
D H+ ++ ICN + ++EG + +K +R +QEL+ KD+
Sbjct: 1526 DNHEPWINQICNNGQELIDEGHANGPAFEKKIQELR-SAWQELKEAVKDR 1574
>AF166169-1|AAD49858.1| 2302|Caenorhabditis elegans beta-G spectrin
protein.
Length = 2302
Score = 29.5 bits (63), Expect = 5.5
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +2
Query: 644 DEHKAFVEDICNQVHQFLEEGQLDEMEIDKCNSFVRLLLFQELRARFKDK 793
D H+ ++ ICN + ++EG + +K +R +QEL+ KD+
Sbjct: 1526 DNHEPWINQICNNGQELIDEGHANGPAFEKKIQELR-SAWQELKEAVKDR 1574
>U53336-7|AAA96179.1| 642|Caenorhabditis elegans Hypothetical
protein K07C11.9 protein.
Length = 642
Score = 28.7 bits (61), Expect = 9.6
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 3/33 (9%)
Frame = +2
Query: 647 EHKAFVEDICNQVHQFLEEGQL--DEM-EIDKC 736
E KA +E CN +++FLE L +E+ E+D+C
Sbjct: 122 EKKASIESRCNMINEFLENYSLSSEELRELDEC 154
>U40417-13|AAA81420.1| 1330|Caenorhabditis elegans Hypothetical
protein T08A9.1 protein.
Length = 1330
Score = 28.7 bits (61), Expect = 9.6
Identities = 34/144 (23%), Positives = 60/144 (41%), Gaps = 7/144 (4%)
Frame = +2
Query: 518 DFNKLIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFVEDICNQVHQFL 697
+ K K I +T +ECK E ++KT + +E K+ + N+ + L
Sbjct: 880 ELEKEFKQRIEVITKAVECKKDEAFARQEKTLEIENRVLSSENESKSKKLEAMNREKEQL 939
Query: 698 EE--GQLDEMEI--DKCNSFVRLLLFQELRARFKDKILVETKILENK--NRLLNVKRVKS 859
E Q+ E E+ D+ N+ L + A+ KD+ +E + L+ +V
Sbjct: 940 ESLIRQMPEGEVILDEFNA----LKESQPSAQIKDRFAAIRSRMERSTDGKCLDTNKVLL 995
Query: 860 QDD-LKNHDALKKEREWEDFEDAV 928
D+ LK H + E E + D +
Sbjct: 996 IDNILKVHKLQQLVNEREQYRDVI 1019
>AF025461-6|AAK84545.1| 335|Caenorhabditis elegans Hypothetical
protein M01D1.10 protein.
Length = 335
Score = 28.7 bits (61), Expect = 9.6
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +2
Query: 500 LASQGFDFNK-LIKDGISYMTIPIECKLRENLTERQKTYSKGKDSIKVPDEHKAFV 664
+ QG FN+ +I +GI Y T PIE K+R Y++G I++ E K +
Sbjct: 258 IPKQGTHFNQDIILEGIQYETAPIERKVR-----ILNKYTRGGADIQMSHESKVTI 308
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,819,149
Number of Sequences: 27780
Number of extensions: 432666
Number of successful extensions: 1278
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1198
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3673557334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -