Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I04.2
         (1356 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0216 + 15495395-15495566,15495648-15495733,15495824-154958...    63   6e-10
04_04_1624 - 34849385-34849410,34849748-34851052,34852121-348522...    62   1e-09
03_05_0585 + 25869955-25869984,25870092-25870182,25870402-258705...    29   6.4  
03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,321...    29   6.4  
07_01_0546 - 4024282-4024291,4024486-4024550,4024739-4024904,402...    29   8.5  

>03_03_0216 +
           15495395-15495566,15495648-15495733,15495824-15495874,
           15496005-15496390,15496760-15496898,15497540-15497595,
           15497712-15497782,15497876-15498081
          Length = 388

 Score = 62.9 bits (146), Expect = 6e-10
 Identities = 27/46 (58%), Positives = 35/46 (76%)
 Frame = +1

Query: 766 TYRKGNSLL*TGSTFTTDCGWGCMLRSGQMMLAQALVCHFLGRSWR 903
           TYRKG   + + S +T+D  WGCM+RS QM++AQAL+ H LGRSWR
Sbjct: 54  TYRKGFDAI-SDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWR 98


>04_04_1624 -
           34849385-34849410,34849748-34851052,34852121-34852294,
           34852386-34852456,34852563-34852618,34853047-34853185,
           34853310-34853695,34853801-34853851,34853936-34854021,
           34854112-34854553,34856241-34856315,34856457-34856593,
           34856679-34856838,34856917-34857012,34857093-34857247,
           34857900-34858032
          Length = 1163

 Score = 62.1 bits (144), Expect = 1e-09
 Identities = 28/51 (54%), Positives = 37/51 (72%)
 Frame = +1

Query: 766 TYRKGNSLL*TGSTFTTDCGWGCMLRSGQMMLAQALVCHFLGRSWRWLPEK 918
           TYR+G   + + S +T+D  WGCM+RS QM++AQAL+ H LGRSWR   EK
Sbjct: 396 TYRRGFDAI-SDSKYTSDVNWGCMVRSSQMLVAQALIFHHLGRSWRRPLEK 445


>03_05_0585 + 25869955-25869984,25870092-25870182,25870402-25870551,
            25870687-25870774,25871096-25871590,25871755-25871890,
            25872117-25872310,25872421-25872529,25872685-25872796,
            25873260-25873339,25873503-25873607
          Length = 529

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 10/31 (32%), Positives = 21/31 (67%)
 Frame = +2

Query: 932  LENFKKDCLHRKIIKWFGDKSSVNSPLSIHQ 1024
            ++N K  C+ R ++ + G+K S++  +S+HQ
Sbjct: 311  VKNLKVSCVGRGLMGYLGNKGSISISMSLHQ 341


>03_01_0418 - 3211687-3211933,3212016-3212164,3212443-3212551,
            3212650-3212840,3212967-3213102,3213216-3213716,
            3213819-3213923,3214008-3214095,3214195-3214266,
            3214692-3214762,3215726-3216008,3216388-3216463
          Length = 675

 Score = 29.5 bits (63), Expect = 6.4
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 932  LENFKKDCLHRKIIKWFGDKSSVNSPLSIHQ 1024
            + N K  C+ R ++ + G+K S++  +S+HQ
Sbjct: 425  IRNLKVSCVGRGLMGYLGNKGSISISMSLHQ 455


>07_01_0546 - 4024282-4024291,4024486-4024550,4024739-4024904,
            4025012-4025160,4025332-4025440,4025532-4025725,
            4025839-4025974,4026123-4026623,4026709-4026813,
            4027023-4027113,4027325-4027411,4028038-4028128,
            4028307-4028336
          Length = 577

 Score = 29.1 bits (62), Expect = 8.5
 Identities = 10/31 (32%), Positives = 20/31 (64%)
 Frame = +2

Query: 932  LENFKKDCLHRKIIKWFGDKSSVNSPLSIHQ 1024
            + N K  C+ R ++ + G+K S++  +S+HQ
Sbjct: 328  VRNLKVSCVGRGLMGYLGNKGSISISMSLHQ 358


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,547,800
Number of Sequences: 37544
Number of extensions: 376780
Number of successful extensions: 757
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4271752284
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)