Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I04.2
         (1356 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical pr...    56   8e-08
AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical ...    50   5e-06

>Z68302-4|CAB54515.1|  521|Caenorhabditis elegans Hypothetical
           protein ZK792.8 protein.
          Length = 521

 Score = 55.6 bits (128), Expect = 8e-08
 Identities = 26/51 (50%), Positives = 33/51 (64%)
 Frame = +1

Query: 766 TYRKGNSLL*TGSTFTTDCGWGCMLRSGQMMLAQALVCHFLGRSWRWLPEK 918
           TYR     L    T TTDCGWGCM+R+ QMM+AQA++ +  GR WR+   K
Sbjct: 182 TYRTDFPALLDTDT-TTDCGWGCMIRTTQMMVAQAIMVNRFGRDWRFTRRK 231


>AL110500-3|CAB54483.1|  493|Caenorhabditis elegans Hypothetical
           protein Y87G2A.3 protein.
          Length = 493

 Score = 49.6 bits (113), Expect = 5e-06
 Identities = 26/68 (38%), Positives = 39/68 (57%)
 Frame = +1

Query: 766 TYRKGNSLL*TGSTFTTDCGWGCMLRSGQMMLAQALVCHFLGRSWRWLPEKTIQNAREFQ 945
           TYR+  S +  G+  +TD GWGCMLR  QM+L + L+   +GR + W  EKT +   +  
Sbjct: 64  TYRRDFSPI-GGTGPSTDQGWGCMLRCAQMLLGEVLLRRHIGRHFEWDIEKTSEIYEKIL 122

Query: 946 ERLFT*KN 969
           +  F  K+
Sbjct: 123 QMFFDEKD 130


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,353,438
Number of Sequences: 27780
Number of extensions: 340772
Number of successful extensions: 533
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3819250826
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)