Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_I03.2
         (1275 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_06_0610 - 25449085-25453284                                         31   1.5  
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330...    29   5.9  
07_03_0559 + 19475893-19476783                                         29   7.8  
03_02_0738 - 10824121-10825572                                         29   7.8  

>11_06_0610 - 25449085-25453284
          Length = 1399

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = -1

Query: 1230 PPPXXGXXXPPPXAFXXTPPPXXKKXXXXXXFXXXXXPXXXPPXXXXXFFXXXXGXPXXQ 1051
            PPP      PPP A    PPP  K             P   PP                 
Sbjct: 1146 PPPEKS---PPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPP 1202

Query: 1050 XFXXXXPXPPXRESPPP 1000
                  P PP +  PPP
Sbjct: 1203 PAPVISPPPPVKSPPPP 1219



 Score = 31.5 bits (68), Expect = 1.5
 Identities = 20/77 (25%), Positives = 22/77 (28%)
 Frame = -1

Query: 1230 PPPXXGXXXPPPXAFXXTPPPXXKKXXXXXXFXXXXXPXXXPPXXXXXFFXXXXGXPXXQ 1051
            PPP      PPP A   +PPP  K             P   PP                 
Sbjct: 1162 PPPIKS---PPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPVKSPPP 1218

Query: 1050 XFXXXXPXPPXRESPPP 1000
                  P PP +  PPP
Sbjct: 1219 PAPVILPPPPVKSPPPP 1235



 Score = 31.1 bits (67), Expect = 1.9
 Identities = 20/77 (25%), Positives = 21/77 (27%)
 Frame = -1

Query: 1230 PPPXXGXXXPPPXAFXXTPPPXXKKXXXXXXFXXXXXPXXXPPXXXXXFFXXXXGXPXXQ 1051
            PPP      PPP A    PPP  K             P   PP                 
Sbjct: 1210 PPPVKS---PPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPPPAAPVILSPPAVKSLPP 1266

Query: 1050 XFXXXXPXPPXRESPPP 1000
                  P PP +  PPP
Sbjct: 1267 PAPVSLPPPPVKSLPPP 1283


>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
            3308247-3308315,3308427-3308513,3308753-3308858,
            3309118-3309237,3309327-3309406,3309497-3309878,
            3310746-3310814,3311460-3312202
          Length = 644

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 21/78 (26%), Positives = 25/78 (32%), Gaps = 1/78 (1%)
 Frame = -1

Query: 1230 PPPXXGXXXPPPXAFXXTPPPXXKKXXXXXXFXXXXXPXXXPPXXXXXFFXXXXG-XPXX 1054
            PPP  G    PP      PPP  +       +     P   PP           G  P  
Sbjct: 12   PPPQGGFPPQPPPMNPYGPPPPQQ-----PAYGHMPPPQGAPPPFLAPPPPPPPGPPPPH 66

Query: 1053 QXFXXXXPXPPXRESPPP 1000
            Q      P PP ++ PPP
Sbjct: 67   QPQFNFGPGPPQQQQPPP 84


>07_03_0559 + 19475893-19476783
          Length = 296

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 23/77 (29%), Positives = 23/77 (29%)
 Frame = +2

Query: 1001 GGGDSLXGGXGXXXXKXWXXGXPXKXXKXXXXXXGGXXXGXXXXXKXKXXXXFFXXGGGV 1180
            GGG    GG G         G             GG   G       K     F  GGGV
Sbjct: 136  GGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGGGGGGIGGGGGKGGG--FGAGGGV 193

Query: 1181 XXXAXGGGXXXPXXGGG 1231
               A GGG      GGG
Sbjct: 194  GGAAGGGGGMGSGGGGG 210


>03_02_0738 - 10824121-10825572
          Length = 483

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 11/25 (44%), Positives = 12/25 (48%)
 Frame = -1

Query: 1242 DXXXPPPXXGXXXPPPXAFXXTPPP 1168
            D   PPP      PPP +F   PPP
Sbjct: 75   DTSPPPPSPPSSSPPPLSFPPPPPP 99


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,526,829
Number of Sequences: 37544
Number of extensions: 365276
Number of successful extensions: 1351
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)