Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H22.2
         (1229 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   1.5  
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript...    25   4.5  

>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.6 bits (56), Expect = 1.5
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
 Frame = -1

Query: 665  ILNFGDFVLSSTVTLEFIV-LQTFGCAFGDSL---SAFS*TSSLKTLVILHSVCISS 507
            ILN+ D+  +S  T+E ++ L ++G  F D     SAF+    L   V L S+  SS
Sbjct: 888  ILNYFDYFFTSVFTIELLLKLVSYGFLFHDGAFCRSAFNLLDLLVVCVSLISMFFSS 944


>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1022

 Score = 25.0 bits (52), Expect = 4.5
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -3

Query: 939 FRTKRRWSXLCQRPIRKRLFNIFIRTNY 856
           F  +++W   C RP+  R+ + F  T++
Sbjct: 784 FECRKQWLRRCHRPLVNRVISAFRSTSH 811


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 987,611
Number of Sequences: 2352
Number of extensions: 18946
Number of successful extensions: 21
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 140200221
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)