Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H21.2
         (1259 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_1136 + 34369994-34370312,34370398-34370550,34370648-343707...   246   4e-65
11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364           30   3.3  
11_02_0131 + 8651175-8651313,8651567-8651743,8651761-8651879,865...    30   4.4  
03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513     30   4.4  
03_04_0090 + 17228253-17228403,17229062-17229129,17229238-172309...    29   7.7  

>02_05_1136 + 34369994-34370312,34370398-34370550,34370648-34370745,
            34371563-34371784
          Length = 263

 Score =  246 bits (601), Expect = 4e-65
 Identities = 118/248 (47%), Positives = 161/248 (64%)
 Frame = +2

Query: 266  SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
            SL   VL A+              G  LQA+ +SHV+LV L LR++GF  YRC R +   
Sbjct: 10   SLLKKVLEAIRELVTDANFDCSGTGFSLQAMDSSHVALVALLLRSEGFEHYRCDRNLSMG 69

Query: 446  XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
                       CAG  D +TIKA D +D VTF+FESPNQ+K++D+EMKLM++D EHLGIP
Sbjct: 70   MNLNNMAKMLRCAGNDDIITIKADDGSDTVTFMFESPNQDKIADFEMKLMDIDSEHLGIP 129

Query: 626  ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
            ++EY   +RMPSSEF+RIC+DLS  G++++IS TKEGVKFS  GDIG+AN+   Q  ++D
Sbjct: 130  DSEYQAIVRMPSSEFSRICKDLSSIGDTVIISVTKEGVKFSTAGDIGTANIVCRQNKTVD 189

Query: 806  KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
            K             +LTF  +Y+N FTKA+ L  QV +S+S+++P+VVEY+I  +G IR 
Sbjct: 190  KPEDATIIEMQEPVSLTFALRYMNSFTKASPLSEQVTISLSSELPVVVEYKIAEMGYIRF 249

Query: 986  YLAPXMRK 1009
            YLAP + +
Sbjct: 250  YLAPKIEE 257


>11_02_0124 + 8568012-8568392,8568532-8568798,8568963-8569364
          Length = 349

 Score = 30.3 bits (65), Expect = 3.3
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 653 MPSSEFARICRDLSQFGESMVISCTKEGVK 742
           +PS++F  I + L QF +S+V  C + G+K
Sbjct: 61  LPSNDFNHIFKSLGQFEQSIVQDCARIGLK 90


>11_02_0131 +
           8651175-8651313,8651567-8651743,8651761-8651879,
           8652179-8652589
          Length = 281

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 653 MPSSEFARICRDLSQFGESMVISCTKEGVK 742
           +PS++F +I R L QF +S +  CT  G++
Sbjct: 10  LPSNDFNQIFRSLEQFKQSTMQHCTHRGLQ 39


>03_02_0780 - 11131064-11131276,11131444-11131516,11134152-11134513
          Length = 215

 Score = 29.9 bits (64), Expect = 4.4
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -2

Query: 826 DDCLLLFVNRSGLGQLDVR*ADVACCRELYSFFCA 722
           D C + + N + +GQ+D R  D +C R+L    CA
Sbjct: 123 DYCFMRYKNANFIGQVDTR-VDASCTRDLAPLACA 156


>03_04_0090 +
           17228253-17228403,17229062-17229129,17229238-17230902,
           17231002-17231143,17231648-17232399
          Length = 925

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 19/56 (33%), Positives = 28/56 (50%)
 Frame = +2

Query: 479 CAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIPETEYSCT 646
           C+  K++  I+  DN  +V    ESP+ ++ S    KLM L+     I ET  S T
Sbjct: 264 CSRLKNSGYIRTDDNLLDVLKHQESPSHQRASSVVAKLMGLEGTTPDIHETARSPT 319


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,036,967
Number of Sequences: 37544
Number of extensions: 379768
Number of successful extensions: 865
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 853
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3899283420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)