Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_H21.2
(1259 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin pr... 270 9e-72
J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein. 270 9e-72
BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nucl... 270 9e-72
BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nucl... 270 9e-72
AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nucl... 270 9e-72
AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nucl... 270 9e-72
CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein. 266 9e-71
CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein. 266 1e-70
AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nucl... 47 1e-04
AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nucl... 47 2e-04
AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nucl... 44 0.001
>M15796-1|AAA35736.1| 261|Homo sapiens protein ( Human cyclin
protein gene, complete cds. ).
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>J04718-1|AAA60040.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>BC062439-1|AAH62439.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>BC000491-1|AAH00491.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>AL121924-4|CAC27344.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>AF527838-1|AAM78556.1| 261|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 261
Score = 270 bits (661), Expect = 9e-72
Identities = 129/244 (52%), Positives = 168/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>CR536501-1|CAG38740.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 266 bits (653), Expect = 9e-71
Identities = 128/244 (52%), Positives = 167/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFA ICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFACICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
YLAP
Sbjct: 250 YLAP 253
>CR541799-1|CAG46598.1| 261|Homo sapiens PCNA protein.
Length = 261
Score = 266 bits (652), Expect = 1e-70
Identities = 128/244 (52%), Positives = 167/244 (68%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXIXXX 445
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNLAMG 69
Query: 446 XXXXXXXXXXXCAGAKDTVTIKAQDNADNVTFVFESPNQEKVSDYEMKLMNLDLEHLGIP 625
CAG +D +T++A+DNAD + VFE+PNQEKVSDYEMKLM+LD+E LGIP
Sbjct: 70 VNLTSMSKILKCAGNEDIITLRAEDNADTLALVFEAPNQEKVSDYEMKLMDLDVEQLGIP 129
Query: 626 ETEYSCTIRMPSSEFARICRDLSQFGESMVISCTKEGVKFSATGDIGSANVKLAQTASID 805
E EYSC ++MPS EFARICRDLS G+++VISC K+GVKFSA+G++G+ N+KL+QT+++D
Sbjct: 130 EQEYSCVVKMPSGEFARICRDLSHIGDAVVISCAKDGVKFSASGELGNGNIKLSQTSNVD 189
Query: 806 KXXXXXXXXXXXXXTLTFXCQYLNYFTKATSLXPQVQLSMSADVPLVVEYRIPXIGXIRX 985
K LTF +YLN+FTKAT L V LSMSADVPLVVEY+I +G ++
Sbjct: 190 KEEEAVTIEMNEPVQLTFALRYLNFFTKATPLSSTVTLSMSADVPLVVEYKIADMGHLKY 249
Query: 986 YLAP 997
LAP
Sbjct: 250 NLAP 253
>AY310164-1|AAP58731.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 47.2 bits (107), Expect = 1e-04
Identities = 24/57 (42%), Positives = 33/57 (57%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXI 436
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDRINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDRNL 66
>AY310163-1|AAP58730.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 46.8 bits (106), Expect = 2e-04
Identities = 24/55 (43%), Positives = 32/55 (58%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCAR 430
S+ VL AL +G+ LQ++ +SHVSLV LTLR++GF YRC R
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSHVSLVQLTLRSEGFDTYRCDR 64
>AY310162-1|AAP58729.1| 73|Homo sapiens proliferating cell nuclear
antigen protein.
Length = 73
Score = 44.0 bits (99), Expect = 0.001
Identities = 23/57 (40%), Positives = 32/57 (56%)
Frame = +2
Query: 266 SLXXXVLXALXXXXXXXXXXXXXNGIQLQALXNSHVSLV*LTLRADGFXKYRCARXI 436
S+ VL AL +G+ LQ++ +S VSLV LTLR++GF YRC R +
Sbjct: 10 SILKKVLEALKDLINEACWDISSSGVNLQSMDSSQVSLVQLTLRSEGFDTYRCDRNL 66
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,340,444
Number of Sequences: 237096
Number of extensions: 2039477
Number of successful extensions: 4554
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4404
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4553
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 18000117210
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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