Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H16.2
         (1275 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0296 + 24216284-24216428,24216631-24216745,24217321-242174...   107   2e-23
02_04_0498 + 23480930-23481186,23483615-23483705,23483790-234839...   100   2e-21
03_01_0052 - 450258-450285,450345-450457,450540-450746,451021-45...    34   0.28 
06_02_0364 + 15178583-15178881,15179652-15179723,15179853-151799...    30   4.5  

>04_04_0296 +
           24216284-24216428,24216631-24216745,24217321-24217411,
           24217495-24217640,24217745-24217964,24218037-24218145,
           24218273-24218441,24218546-24218720
          Length = 389

 Score =  107 bits (256), Expect = 2e-23
 Identities = 58/180 (32%), Positives = 100/180 (55%)
 Frame = +2

Query: 440 KKIKTGYLNLKKTTLKHPXWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRRLDAIFA 619
           +KI     NL ++ ++       L Y   VG+KE A        E  T+   +++D +F 
Sbjct: 86  EKIADAEENLGESEVREAHLAKSL-YFIRVGEKEKALE-QLKVTEGKTVAVGQKMDLVFH 143

Query: 620 LFRIAYFHGCNVKEMGKAINKAHELVDKGGDWRSRNKLKAYEAIYCLAVRDYSHAAELFI 799
             +I +F+  +   + K+I+KA +L ++GGDW  +N+LK YE +YC+A R++  AA LF+
Sbjct: 144 TLQIGFFY-MDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLYCMATRNFKKAASLFL 202

Query: 800 DCVSTFESYELVDFGTIIQYCVLACALALERHALQSALRRQGAAVQALRSRFPELXXLVN 979
           D +STF +YEL  + T I Y VL   ++L+R +L++ +      + A+  + P L   +N
Sbjct: 203 DSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKV-VDAPEILAVIGKVPHLSEFLN 261


>02_04_0498 +
           23480930-23481186,23483615-23483705,23483790-23483935,
           23484029-23484248,23484314-23484422,23484518-23484686,
           23484801-23484975
          Length = 388

 Score =  100 bits (240), Expect = 2e-21
 Identities = 56/180 (31%), Positives = 95/180 (52%)
 Frame = +2

Query: 440 KKIKTGYLNLKKTTLKHPXWQDRLDYLCSVGDKETATALATSKYEDSTLTTNRRLDAIFA 619
           +KI     NL ++ ++       L Y   VG+KE A        E  T+   +++D +F 
Sbjct: 85  EKIADAEENLGESEVREAHLAKSL-YFMRVGEKEKALE-QLKVTEGKTVAVGQKMDLVFY 142

Query: 620 LFRIAYFHGCNVKEMGKAINKAHELVDKGGDWRSRNKLKAYEAIYCLAVRDYSHAAELFI 799
             +I  FH  +   + K+I+KA  L ++GGDW  +N+LK YE +Y +A R++  AA LF+
Sbjct: 143 TLQIGLFH-MDFDLISKSIDKAKNLFEEGGDWERKNRLKVYEGLYFMATRNFKKAASLFL 201

Query: 800 DCVSTFESYELVDFGTIIQYCVLACALALERHALQSALRRQGAAVQALRSRFPELXXLVN 979
           D +STF +YEL  + T + Y V+   + L+R +L+  +      + A+  + P L   +N
Sbjct: 202 DSISTFTTYELFPYDTFVFYTVITSIITLDRVSLKQKV-VDAPEILAVIGKVPHLSEFLN 260


>03_01_0052 -
           450258-450285,450345-450457,450540-450746,451021-451080,
           451281-451376,451495-451551,451786-451845,452774-452853,
           454265-454367,454530-454571
          Length = 281

 Score = 33.9 bits (74), Expect = 0.28
 Identities = 17/50 (34%), Positives = 25/50 (50%)
 Frame = +3

Query: 792 YSLTVCQLLNLMNWLISVQSSSTVFSLVPWPLKGMLYNLLYAGKVLQYKL 941
           YS  + Q +  +N  I   +SS +  L   P K ++YNL Y   +L Y L
Sbjct: 38  YSTNMTQAMGAVNSCIPSLTSSDILELTSVPFKNIVYNLAYMFWILGYSL 87


>06_02_0364 +
           15178583-15178881,15179652-15179723,15179853-15179917,
           15180890-15180934,15182493-15183170,15183376-15183410,
           15183647-15183736,15183896-15183985,15184164-15184262,
           15184938-15185013,15185473-15185588
          Length = 554

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 10/25 (40%), Positives = 13/25 (52%)
 Frame = -3

Query: 274 PMPCIQVFFPPLIAPFSIDCNASIY 200
           P PC  V   P + PFS+ C  + Y
Sbjct: 471 PFPCCHVIVYPFLVPFSLQCEVTNY 495


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,194,367
Number of Sequences: 37544
Number of extensions: 463537
Number of successful extensions: 1092
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3957481680
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)