Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_H12.2
(1324 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 28 0.024
07_01_0080 + 587674-588510 33 0.67
02_05_0686 - 30900748-30902167,30903442-30904742 31 1.5
02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317 31 2.0
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 30 3.6
01_06_1377 + 36764461-36765339 30 3.6
09_02_0603 - 11150739-11150746,11150791-11151340 30 4.7
03_01_0515 - 3864796-3865425 30 4.7
02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,329... 30 4.7
02_05_0407 + 28715332-28715385,28715528-28715680,28715810-287158... 25 5.6
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 6.2
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 29 8.2
04_03_0660 + 18463011-18463322,18463424-18463516,18464500-184646... 29 8.2
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 29 8.2
>10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 28.3 bits (60), Expect(3) = 0.024
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PPP P PPP PPPPPP
Sbjct: 634 PPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPP 672
Score = 23.8 bits (49), Expect(3) = 0.024
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -3
Query: 1292 PPXXXPXXXXPPPPP 1248
PP P PPPPP
Sbjct: 608 PPPILPNRSVPPPPP 622
Score = 22.6 bits (46), Expect(3) = 0.024
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = -3
Query: 1034 PPPPPPL 1014
PPPPPPL
Sbjct: 691 PPPPPPL 697
>07_01_0080 + 587674-588510
Length = 278
Score = 32.7 bits (71), Expect = 0.67
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPPXXFF 1235
P PP PP PP PPPPP F
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPPPLF 123
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPPP
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPP 118
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPPP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPP 340
Score = 31.5 bits (68), Expect = 1.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPPP
Sbjct: 316 PPPPKPAAAAPPPPPPPKAAPPPPPP 341
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 1079 PPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP G PPPPPP PP
Sbjct: 339 PPPKGPPPPPPAKGPPPPPPPKGPSPPPP 367
>02_01_0275 - 1828300-1828344,1828396-1828531,1828623-1829317
Length = 291
Score = 31.1 bits (67), Expect = 2.0
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP F PP PP P PPP
Sbjct: 112 PPPPRKKPQFQPPPQPPRAWDPSPPP 137
>05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 30.3 bits (65), Expect = 3.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 1079 PPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP PPPPPPL PP
Sbjct: 74 PPPPAPRPPRRHHRIPPPPPPLLPTPPPP 102
>01_06_1377 + 36764461-36765339
Length = 292
Score = 30.3 bits (65), Expect = 3.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Frame = -1
Query: 1318 PPXXXXFFXPPXXPPXXXXPPPP 1250
PP ++ PP PP PPPP
Sbjct: 164 PPSSSPYYFPPPPPPAYSAPPPP 186
Score = 29.1 bits (62), Expect = 8.2
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 1321 SPPXXXXFFXPPXXPPXXXXPPPPP 1247
SPP + PP P PPPPP
Sbjct: 154 SPPPPEPQYPPPSSSPYYFPPPPPP 178
>09_02_0603 - 11150739-11150746,11150791-11151340
Length = 185
Score = 29.9 bits (64), Expect = 4.7
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP FF P PP PPPPP
Sbjct: 62 PPPPPLGSFFVP---PPQSRVPPPPP 84
Score = 29.5 bits (63), Expect = 6.2
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = -3
Query: 1088 FFXPPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
F PPP G PPPPPL PP
Sbjct: 43 FPPPPPPGSTFVPLPQSGVPPPPPLGSFFVPP 74
>03_01_0515 - 3864796-3865425
Length = 209
Score = 29.9 bits (64), Expect = 4.7
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPP
Sbjct: 61 PPPPAAGPLMPPPPPPPSVTSSPPPP 86
>02_01_0458 + 3291563-3291733,3292082-3292769,3292847-3293363,
3293438-3293637,3294137-3294372,3294469-3295302
Length = 881
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPPP
Sbjct: 353 PPPPPPPPPPPPPPPPPPPRPPPPPP 378
Score = 29.9 bits (64), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP PP PP PPPPP
Sbjct: 354 PPPPPPPPPPPPPPPPPPRPPPPPPP 379
>02_05_0407 + 28715332-28715385,28715528-28715680,28715810-28715872,
28715988-28716021,28716157-28716279,28716400-28716462,
28716655-28716748,28717049-28717094,28717180-28717247,
28717360-28717408,28717593-28717658,28718876-28719074,
28719344-28719386,28719719-28719923
Length = 419
Score = 24.6 bits (51), Expect(2) = 5.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 1018 GGGGGGXKXLXXXXXXPXGGGKK 1086
GGGGGG K GGG K
Sbjct: 34 GGGGGGGKSQFSFGFGGLGGGSK 56
Score = 23.4 bits (48), Expect(2) = 5.6
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = +1
Query: 994 GGXXXXXRGGGGGG 1035
GG RGGGGGG
Sbjct: 20 GGGGGARRGGGGGG 33
>03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 29.5 bits (63), Expect = 6.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
PSP PP PP PPPPP
Sbjct: 338 PSPRPVQPSNAPPPPPPPPPPPPPPP 363
>08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 29.1 bits (62), Expect = 8.2
Identities = 12/39 (30%), Positives = 14/39 (35%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
P P P ++ PPP PPPPPP
Sbjct: 74 PGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQPPPPPPP 112
>04_03_0660 + 18463011-18463322,18463424-18463516,18464500-18464607,
18464892-18465044,18465256-18465354,18465443-18465571,
18465987-18466166,18466208-18466246,18466247-18466363,
18466445-18466609
Length = 464
Score = 29.1 bits (62), Expect = 8.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
PSPP PP PP PPPPP
Sbjct: 47 PSPPRPP----PPPPPPTQPAPPPPP 68
>02_04_0567 - 23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 29.1 bits (62), Expect = 8.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -1
Query: 1300 FFXPPXXPPXXXXPPPPP 1247
F PP PP PPPPP
Sbjct: 35 FLCPPPPPPPPPPPPPPP 52
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.308 0.148 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,410,743
Number of Sequences: 37544
Number of extensions: 593504
Number of successful extensions: 2532
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 899
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2040
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4143716112
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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