Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_H12.2
(1324 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 0.44
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 0.44
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 0.45
Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical pr... 31 2.4
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 4.2
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 4.2
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 30 4.2
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 30 4.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 4.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 4.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 4.2
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 7.3
AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical ... 29 7.3
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 29 7.3
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 26 7.9
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 26 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 1079 PPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP G PPPPPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 27.5 bits (58), Expect(2) = 0.44
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 1318 PPXXXXFFXPPXXPPXXXXPPPPP 1247
PP PP PP PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP 730
Score = 24.2 bits (50), Expect(2) = 0.44
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -1
Query: 1132 PPPXFXXXPXXXXXFFFXPPPGGXXXKXXXXXXXPXPPPXXXXXXPXXXGXXXFFFFXPP 953
PPP P PPPGG P PPP P F PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 952 P 950
P
Sbjct: 786 P 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 1079 PPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP G PPPPPP PP
Sbjct: 745 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 773
Score = 27.5 bits (58), Expect(2) = 0.44
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 1318 PPXXXXFFXPPXXPPXXXXPPPPP 1247
PP PP PP PPPPP
Sbjct: 707 PPITGGPPPPPGLPPITGGPPPPP 730
Score = 24.2 bits (50), Expect(2) = 0.44
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -1
Query: 1132 PPPXFXXXPXXXXXFFFXPPPGGXXXKXXXXXXXPXPPPXXXXXXPXXXGXXXFFFFXPP 953
PPP P PPPGG P PPP P F PP
Sbjct: 728 PPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 785
Query: 952 P 950
P
Sbjct: 786 P 786
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 5.6
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = -3
Query: 1079 PPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP G PPPPPP PP
Sbjct: 328 PPPPGGLPPISGGPPPPPPPPGGCPPPPP 356
Score = 27.5 bits (58), Expect(2) = 0.45
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = -1
Query: 1318 PPXXXXFFXPPXXPPXXXXPPPPP 1247
PP PP PP PPPPP
Sbjct: 290 PPITGGPPPPPGLPPITGGPPPPP 313
Score = 24.2 bits (50), Expect(2) = 0.45
Identities = 18/61 (29%), Positives = 18/61 (29%)
Frame = -1
Query: 1132 PPPXFXXXPXXXXXFFFXPPPGGXXXKXXXXXXXPXPPPXXXXXXPXXXGXXXFFFFXPP 953
PPP P PPPGG P PPP P F PP
Sbjct: 311 PPPPPGGLPPITGGPPPPPPPGGLPP--ISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPP 368
Query: 952 P 950
P
Sbjct: 369 P 369
>Z34533-1|CAA84302.3| 730|Caenorhabditis elegans Hypothetical protein
B0285.1 protein.
Length = 730
Score = 30.7 bits (66), Expect = 2.4
Identities = 16/47 (34%), Positives = 16/47 (34%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP F P F PPP PP PPP PP
Sbjct: 190 PPPSFNINPFQP--MFSQPPPPPLPPNSQFMTPPPRPPPAPFSIPPP 234
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP F PP PP PPPPP
Sbjct: 46 PPPPICPPQFCPP--PPMCPPPPPPP 69
Score = 29.1 bits (62), Expect = 7.3
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
PPP P F PPP PPPPPP+ PP
Sbjct: 40 PPPLPCPPPPICPPQFCPPPPM------CPPPPPPPPPPMCPPPPPP 80
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 4.2
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP F PP PP PPPPP
Sbjct: 55 PPPPPCPAQFCPP--PPICPPPPPPP 78
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -3
Query: 1139 KXPPPXFXXXPXXXXX--FFFXPPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
+ PPP P + PPP G PPPPP PP
Sbjct: 268 RGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPP 318
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 29.9 bits (64), Expect = 4.2
Identities = 15/51 (29%), Positives = 17/51 (33%), Gaps = 2/51 (3%)
Frame = -3
Query: 1139 KXPPPXFXXXPXXXXX--FFFXPPPXGXXXXXXXXXXPPPPPPLXXXXXPP 993
+ PPP P + PPP G PPPPP PP
Sbjct: 268 RGPPPHHPYGPPHPMHHPYAMMPPPFGFFPPPPRGHFPPPPPHFMGRGMPP 318
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PPP P PPP G PPPPPP
Sbjct: 264 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PPP P PPP G PPPPPP
Sbjct: 285 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.9 bits (64), Expect = 4.2
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PPP P PPP G PPPPPP
Sbjct: 270 PPPPRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPP 308
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical protein
C08B11.5 protein.
Length = 388
Score = 29.5 bits (63), Expect = 5.6
Identities = 22/103 (21%), Positives = 25/103 (24%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPPXXFFFXXXXXXXXXXXXXXGXXXXXXXXXXXXXX 1145
P PP + PP PP P PP G
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 1144 XKXXPPPXFXXXPXXXXXFFFXPPPGGXXXKXXXXXXXPXPPP 1016
PPP + P + PPP P PPP
Sbjct: 347 MPPPPPPRY---PSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA binding
protein protein.
Length = 398
Score = 29.5 bits (63), Expect = 5.6
Identities = 22/103 (21%), Positives = 25/103 (24%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPPXXFFFXXXXXXXXXXXXXXGXXXXXXXXXXXXXX 1145
P PP + PP PP P PP G
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 1144 XKXXPPPXFXXXPXXXXXFFFXPPPGGXXXKXXXXXXXPXPPP 1016
PPP + P + PPP P PPP
Sbjct: 357 MPPPPPPRY---PSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical protein
B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P PP P PP PPPPP
Sbjct: 497 PPPPPLPPIATPSSVPPPPPPPPPPP 522
>AL032646-7|CAA21680.1| 485|Caenorhabditis elegans Hypothetical
protein Y54E2A.8 protein.
Length = 485
Score = 29.1 bits (62), Expect = 7.3
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 1127 PXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
P F FFF PP PPPPPP
Sbjct: 136 PVFDDVQDTDLGFFFDQPPPTPIPTPVPILEPPPPPP 172
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.1 bits (62), Expect = 7.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -1
Query: 1324 PSPPXXXXFFXPPXXPPXXXXPPPPP 1247
P+PP PP P PPPPP
Sbjct: 123 PAPPNPPRTCCPPPTPAAPPPPPPPP 148
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 25.8 bits (54), Expect(2) = 7.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PP F P PPP PPPPPP
Sbjct: 616 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 654
Score = 21.4 bits (43), Expect(2) = 7.9
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 1298 FXPPXXXPXXXXPPPPP 1248
+ P P PPPPP
Sbjct: 598 YGTPENRPHAVPPPPPP 614
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 25.8 bits (54), Expect(2) = 8.1
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = -3
Query: 1133 PPPXFXXXPXXXXXFFFXPPPXGXXXXXXXXXXPPPPPP 1017
PP F P PPP PPPPPP
Sbjct: 442 PPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPP 480
Score = 21.4 bits (43), Expect(2) = 8.1
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = -3
Query: 1298 FXPPXXXPXXXXPPPPP 1248
+ P P PPPPP
Sbjct: 424 YGTPENRPHAVPPPPPP 440
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.308 0.148 0.480
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,128,143
Number of Sequences: 27780
Number of extensions: 307698
Number of successful extensions: 1109
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 374
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3704777368
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 43 (21.9 bits)
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