Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H11.2
         (1298 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyce...    81   2e-16
SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr 1|...    34   0.037
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom...    29   1.1  
SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr 1...    28   3.2  
SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharo...    27   4.3  
SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated memb...    26   9.9  
SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr 1|||...    26   9.9  

>SPCC417.12 |||carboxylesterase-lipase family |Schizosaccharomyces
           pombe|chr 3|||Manual
          Length = 520

 Score = 81.4 bits (192), Expect = 2e-16
 Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 21/222 (9%)
 Frame = +1

Query: 202 YXFLQIPYAKAPIGEFRFKXPQPPES-WEHERDATSVNPNNVCFQ--FDIFLNASRG--- 363
           + F  I YAK P+G+ R++ P   E  +++  D        +C Q  ++   N  R    
Sbjct: 19  HRFTGIRYAKPPVGKLRWRRPVTLEDGYDYSGDYNQFK--TICPQPFYNNRKNQVRNPDF 76

Query: 364 --SEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLIEHDVVVVFI 537
              EDCL+LN++ P      +  P +  IHGG   +GN +   +  P  L        FI
Sbjct: 77  KYDEDCLFLNIWVPAGEKPAEGWPVLYFIHGGWLQVGNPLHYRQCDPQDLQADGSPAKFI 136

Query: 538 ----NYRLGAFGFLS----LDIPEAAGNMGLKDQVMALKWVQENIQQFCGNKDSVTIFGI 693
                +RL  FGFL+    L+    + N G  DQ + L+W  ++I+ F GNK+++ + GI
Sbjct: 137 LVSPGHRLNLFGFLAGKELLEEDPKSSNFGFWDQRLGLEWTYKHIESFGGNKENIAVGGI 196

Query: 694 SAGSAS----VEYLQLSPSSRGLFQQAILQS-GSSLNHWAIE 804
           SAGS S    + Y    P +  + ++A+L S G S+   ++E
Sbjct: 197 SAGSYSALFQLIYETYHPEANQIIKRALLLSNGLSVQPKSVE 238


>SPAC1039.03 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 341

 Score = 34.3 bits (75), Expect = 0.037
 Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 2/107 (1%)
 Frame = +1

Query: 388 VFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTEN--GPDFLIEHDVVVVFINYRLGAFG 561
           +F P   + +   P  +  HGGG+VLGN  I TEN        +   VVV ++YRL    
Sbjct: 88  IFRPHGTAPEGGWPCFLWFHGGGWVLGN--INTENSFATHMCEQAKCVVVNVDYRLA--- 142

Query: 562 FLSLDIPEAAGNMGLKDQVMALKWVQENIQQFCGNKDSVTIFGISAG 702
                 PE      + D   AL +  EN      N + + + G SAG
Sbjct: 143 ------PEDPFPACIDDGWEALLYCYENADTLGINPNKIAVGGSSAG 183


>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 781

 Score = 29.5 bits (63), Expect = 1.1
 Identities = 13/47 (27%), Positives = 28/47 (59%)
 Frame = +1

Query: 568 SLDIPEAAGNMGLKDQVMALKWVQENIQQFCGNKDSVTIFGISAGSA 708
           S+ IPE+   + L+++ ++   ++ N  +    +DS++IFG S  +A
Sbjct: 162 SITIPESDQQINLQNKFLSTPSIKNNANKSLSPQDSISIFGTSPFNA 208


>SPAPB1A11.02 |||esterase/lipase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 339

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 36/131 (27%), Positives = 54/131 (41%), Gaps = 2/131 (1%)
 Frame = +1

Query: 337 DIFLNASRGSEDCLYLNVFTPKLPSCDKLLPTMVSIHGGGFVLGNGIIKTENGPDFLI-E 513
           DI +    G+E  +   VFTP     D     MV  H  G+ +  G+   ++    L  +
Sbjct: 64  DILIPTRDGTE--IDGRVFTPVSVPAD-YRSLMVFYHSSGWCM-RGVRDDDSLFKILTPK 119

Query: 514 HDVVVVFINYRLGAFGFLSLDIPEAAGNMGLKDQVMALKWVQENIQQFCGN-KDSVTIFG 690
              V V ++YRL          PE+   +   D + + KWV  NI++   N K    + G
Sbjct: 120 FGCVCVSVDYRLA---------PESKFPVAHNDAIDSFKWVASNIEKLGANPKRGFFLGG 170

Query: 691 ISAGSASVEYL 723
            SAG   V  L
Sbjct: 171 ASAGGNFVSVL 181


>SPBC12C2.02c |ste20|ste16|sterility protein Ste20|Schizosaccharomyces
            pombe|chr 2|||Manual
          Length = 1309

 Score = 27.5 bits (58), Expect = 4.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +1

Query: 457  FVLGNGIIKTENGPDFLIEHDVVVVFINY 543
            + +GN I KT+ G  FLI HD + + + Y
Sbjct: 1102 WAIGN-IGKTDQGITFLINHDTIPLIVKY 1129


>SPAC19A8.05c |vps27|sst4|sorting receptor for ubiquitinated
           membrane proteins, ESCRT 0 complex|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 610

 Score = 26.2 bits (55), Expect = 9.9
 Identities = 12/34 (35%), Positives = 18/34 (52%)
 Frame = -3

Query: 534 KYNDNIMFNKKVWSVFCLNYPISQDKTSSVYGHH 433
           KYN  I   +K+ +   LN  + + + SS Y HH
Sbjct: 425 KYNGLIQALQKLQTCMRLNDALIEQRLSSTYAHH 458


>SPAC10F6.03c |||CTP synthase |Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 600

 Score = 26.2 bits (55), Expect = 9.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)
 Frame = +1

Query: 577 IPEAAGNMGLKDQVMALKWVQENIQQFCG 663
           +P   G+ G++  + A KW +EN   + G
Sbjct: 373 VPGGFGSRGVEGMIAAAKWARENNTPYLG 401


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,575,361
Number of Sequences: 5004
Number of extensions: 98239
Number of successful extensions: 277
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 234
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 709422546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)