Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H09.2
         (1279 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF038611-6|AAB92039.1|  181|Caenorhabditis elegans Hypothetical ...    97   2e-20
U40800-15|AAA81499.1|  158|Caenorhabditis elegans Hypothetical p...    68   2e-11
Z49125-3|CAB97233.1|  213|Caenorhabditis elegans Hypothetical pr...    41   0.002
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    32   0.76 
Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical p...    30   4.0  

>AF038611-6|AAB92039.1|  181|Caenorhabditis elegans Hypothetical
           protein E04A4.5 protein.
          Length = 181

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 48/108 (44%), Positives = 65/108 (60%)
 Frame = +2

Query: 224 MDASXSAPCPWRXLDXSXXXXXXXXXXXXLFHSIKGFRNAPLGFSRKMLGSLAAVKERSP 403
           M+     PCP+R  D              +F +  G++NA  G  +K++G +  V+ RS 
Sbjct: 1   MEEYTREPCPYRIGDDIGSAFAMGLVGGSIFQAFGGYKNAAKG--KKLVGMMREVRMRST 58

Query: 404 IVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNG 547
           + G  FA WGGMFSTIDC LV +R+KEDP NSI+SG LTG +LA R+G
Sbjct: 59  LTGVQFAAWGGMFSTIDCCLVAIRKKEDPINSIVSGGLTGALLAIRSG 106


>U40800-15|AAA81499.1|  158|Caenorhabditis elegans Hypothetical
           protein D2096.1 protein.
          Length = 158

 Score = 67.7 bits (158), Expect = 2e-11
 Identities = 31/50 (62%), Positives = 37/50 (74%)
 Frame = +2

Query: 395 RSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARN 544
           RS + G  FA WGG+FSTIDC LV  R+KED  NSI+SG LTG +LA R+
Sbjct: 2   RSTLAGVQFAAWGGLFSTIDCCLVANRKKEDSINSIVSGGLTGALLAIRS 51


>Z49125-3|CAB97233.1|  213|Caenorhabditis elegans Hypothetical
           protein C47G2.3 protein.
          Length = 213

 Score = 41.1 bits (92), Expect = 0.002
 Identities = 21/55 (38%), Positives = 28/55 (50%)
 Frame = +2

Query: 386 VKERSPIVGGNFAVWGGMFSTIDCSLVYMRQKEDPWNSIMSGALTGGILAARNGV 550
           +  R    G NF   G MFS  +C+L  +R K D  N   SG + GG+L  R G+
Sbjct: 136 MSSRMKSYGKNFGSIGLMFSGTECALETIRAKSDWRNGTYSGGIVGGLLGLRAGI 190


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
           protein B0207.1 protein.
          Length = 564

 Score = 32.3 bits (70), Expect = 0.76
 Identities = 19/77 (24%), Positives = 32/77 (41%)
 Frame = -2

Query: 594 AKRIPPISALPAIAGTPFLAARIPPVRAPLIMEFHGSSFCLMYTSEQSMVENIPPQTAKL 415
           A   P ++++P     P    +IPP   P++ +           +   +   +PP T  L
Sbjct: 26  ANPFPNVNSVPVQNPNP---NQIPPAPRPIVNQIQYPKPTNPVQNPNKLSTGLPPMTMML 82

Query: 414 PPTIGERSFTAAKLPSI 364
           PPT+ E   T  K P +
Sbjct: 83  PPTVQEPLPTPVKTPPL 99


>Z70756-10|CAI46587.1|  228|Caenorhabditis elegans Hypothetical
           protein T06E4.12 protein.
          Length = 228

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 618 MIPMPSIRAKRIPPISALPAIAGTPFLAARIPPVRAPLI 502
           + P P + A  IP  +  P IA  P LAA   P  AP +
Sbjct: 163 LAPRPVLAAPAIPAFAPAPIIAPRPVLAAPAIPAFAPAV 201


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,112,653
Number of Sequences: 27780
Number of extensions: 506865
Number of successful extensions: 1163
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1120
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1162
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3568584636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)