Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H08.2
         (1294 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ...    87   9e-16
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ...    57   9e-07
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi...    44   0.009
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0...    40   0.11 
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ...    38   0.57 

>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
           root|Rep: Putative uncharacterized protein - Salmonella
           typhimurium
          Length = 127

 Score = 87.0 bits (206), Expect = 9e-16
 Identities = 48/106 (45%), Positives = 50/106 (47%)
 Frame = +3

Query: 612 GXAPLKXIKKXDAXXXGGXXRXDYKXXRXSPXKAPXCALXSXPXRXGXTCXXFSLGKXXR 791
           G APL  I K DA   GG  R DYK  R  P +AP CAL   P R   TC  FSL +  R
Sbjct: 19  GSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLPDTCPPFSLREAWR 78

Query: 792 FLIXHAXGIXXRCRXXAXXXXVXKNPXXXQXGAXYXENXVXXPXXK 929
           FLI HA GI  RCR  A    V  NP      A Y    V  P  K
Sbjct: 79  FLIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVTIVLSPTRK 124


>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
           Escherichia coli|Rep: Putative uncharacterized protein -
           Escherichia coli
          Length = 147

 Score = 57.2 bits (132), Expect = 9e-07
 Identities = 41/112 (36%), Positives = 49/112 (43%)
 Frame = +3

Query: 405 VCXWGALPXPRXXTRCXRSXGWGEGYXLTXXGXXGYPQNRGITXEKXCXQXAXKGPKTEK 584
           +C  G +P PR  TR  RS G GE Y LT  G   + ++   T  K   +     P+  +
Sbjct: 30  ICDTGDIPLPRSLTRYARSFGCGERYRLTD-GDGNFLEDTRKTLSKEEIR-----PRRSR 83

Query: 585 XXXXXXXXXGXAPLKXIKKXDAXXXGGXXRXDYKXXRXSPXKAPXCALXSXP 740
                    G APL  I K DA   GG  R DYK  R  P  AP CAL   P
Sbjct: 84  FSI------GSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLP 129


>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
           organisms|Rep: Predicted protein - Nematostella
           vectensis
          Length = 97

 Score = 44.0 bits (99), Expect = 0.009
 Identities = 22/43 (51%), Positives = 22/43 (51%)
 Frame = +3

Query: 612 GXAPLKXIKKXDAXXXGGXXRXDYKXXRXSPXKAPXCALXSXP 740
           G APL  I K DA   GG  R DYK  R  P  AP CAL   P
Sbjct: 55  GSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97


>UniRef50_UPI00015C640B Cluster: hypothetical protein
           CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
           BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
           Citrobacter koseri ATCC BAA-895
          Length = 99

 Score = 40.3 bits (90), Expect = 0.11
 Identities = 21/53 (39%), Positives = 24/53 (45%)
 Frame = -3

Query: 926 PGXXXXXIFRIXXXXLXXXGVFXHXPXXGARPTPXXDTXSVXYEKAPXFXKGE 768
           PG      +R         GV  + P    RP P  DT SV YEKAP F KG+
Sbjct: 8   PGWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGK 60


>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
           root|Rep: Putative uncharacterized protein - Escherichia
           coli
          Length = 61

 Score = 37.9 bits (84), Expect = 0.57
 Identities = 18/37 (48%), Positives = 19/37 (51%)
 Frame = -3

Query: 554 LXTXFFXXYPPILWITXXPPXXEXIPLSPXXRPXAXS 444
           L T  F  YP ILWIT  PP  E  PL+   RP   S
Sbjct: 24  LLTCSFRLYPLILWITVLPPLSELTPLAAVERPSVAS 60


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 410,766,148
Number of Sequences: 1657284
Number of extensions: 3745154
Number of successful extensions: 1712
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1687
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1712
length of database: 575,637,011
effective HSP length: 103
effective length of database: 404,936,759
effective search space used: 132414320193
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)