Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H06.2
         (1296 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcript...    26   2.1  
CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.          25   3.6  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   6.4  
AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal ...    24   8.4  

>AB090814-2|BAC57904.1| 1049|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1049

 Score = 26.2 bits (55), Expect = 2.1
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +1

Query: 649 IRYPNFFKKRSPSTAEATLASMET 720
           + YP+ FKKR+P     T+ + ET
Sbjct: 426 LAYPDVFKKRAPPNLSPTINTPET 449


>CR954256-4|CAJ14145.1| 1494|Anopheles gambiae tensin protein.
          Length = 1494

 Score = 25.4 bits (53), Expect = 3.6
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
 Frame = -1

Query: 921 SNQASNDHRHSH*ERHNAHHNV-VNDKFLLSNS 826
           S Q     +H H   H+ HH+   ND F+ +N+
Sbjct: 644 SQQPQQQQQHQHHHHHHHHHHQNPNDHFVNTNT 676


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 24.6 bits (51), Expect = 6.4
 Identities = 15/58 (25%), Positives = 25/58 (43%)
 Frame = +1

Query: 580 MHHPKNENDEHKEQQKTKRSIFNIRYPNFFKKRSPSTAEATLASMETLDDKMDTSNDG 753
           +   + +   H  QQ+    I   +YP     R PST+     S+E  ++ MD+   G
Sbjct: 608 LQQQQQQQARHLPQQQAIHHIHQQQYPRQVIHRRPSTS-----SVELSEESMDSDGGG 660


>AY187041-1|AAO39755.1|  272|Anopheles gambiae putative antennal
           carrier protein TOL-1 protein.
          Length = 272

 Score = 24.2 bits (50), Expect = 8.4
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 1/34 (2%)
 Frame = +1

Query: 682 PSTAEATLASMETLDDKMDTSNDGLENV-KLEPM 780
           P   + +  S++ L DK+ T  +GLE+V  ++PM
Sbjct: 51  PDFVDCSTESVQGLFDKLVTGIEGLEHVGTIDPM 84


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 894,825
Number of Sequences: 2352
Number of extensions: 15878
Number of successful extensions: 34
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33
length of database: 563,979
effective HSP length: 66
effective length of database: 408,747
effective search space used: 149192655
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)