Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_H02.2
         (1242 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY075424-1|AAL68240.1|  116|Drosophila melanogaster LD44495p pro...    99   1e-20
AF109133-1|AAF14224.1|  116|Drosophila melanogaster chromatin pr...    99   1e-20
AF108353-1|AAF14223.1|  116|Drosophila melanogaster chromatin pr...    99   1e-20
AE013599-1543|AAF58482.2|  116|Drosophila melanogaster CG12372-P...    99   1e-20

>AY075424-1|AAL68240.1|  116|Drosophila melanogaster LD44495p
           protein.
          Length = 116

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 45/85 (52%), Positives = 57/85 (67%)
 Frame = +3

Query: 231 GCANCAAFLRMQSHKAXVSACTSXHFXGMLAVMHPEASWVCKWQRISIFCKGVYAXSVSG 410
           GC NC  FLRM+++K  V   TS +F G++A+  P  SWV KWQR+S F +G+YA SVSG
Sbjct: 32  GCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSG 91

Query: 411 RLPAGVIXXMKXRGIAYRPRDTSQR 485
            LP   +  MK RGI Y+ RD SQR
Sbjct: 92  TLPQSTLRDMKNRGIVYKSRDRSQR 116


>AF109133-1|AAF14224.1|  116|Drosophila melanogaster chromatin
           protein SPT4 protein.
          Length = 116

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 45/85 (52%), Positives = 57/85 (67%)
 Frame = +3

Query: 231 GCANCAAFLRMQSHKAXVSACTSXHFXGMLAVMHPEASWVCKWQRISIFCKGVYAXSVSG 410
           GC NC  FLRM+++K  V   TS +F G++A+  P  SWV KWQR+S F +G+YA SVSG
Sbjct: 32  GCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSG 91

Query: 411 RLPAGVIXXMKXRGIAYRPRDTSQR 485
            LP   +  MK RGI Y+ RD SQR
Sbjct: 92  TLPQSTLRDMKNRGIVYKSRDRSQR 116


>AF108353-1|AAF14223.1|  116|Drosophila melanogaster chromatin
           protein SPT4 protein.
          Length = 116

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 45/85 (52%), Positives = 57/85 (67%)
 Frame = +3

Query: 231 GCANCAAFLRMQSHKAXVSACTSXHFXGMLAVMHPEASWVCKWQRISIFCKGVYAXSVSG 410
           GC NC  FLRM+++K  V   TS +F G++A+  P  SWV KWQR+S F +G+YA SVSG
Sbjct: 32  GCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSG 91

Query: 411 RLPAGVIXXMKXRGIAYRPRDTSQR 485
            LP   +  MK RGI Y+ RD SQR
Sbjct: 92  TLPQSTLRDMKNRGIVYKSRDRSQR 116


>AE013599-1543|AAF58482.2|  116|Drosophila melanogaster CG12372-PA
           protein.
          Length = 116

 Score = 98.7 bits (235), Expect = 1e-20
 Identities = 45/85 (52%), Positives = 57/85 (67%)
 Frame = +3

Query: 231 GCANCAAFLRMQSHKAXVSACTSXHFXGMLAVMHPEASWVCKWQRISIFCKGVYAXSVSG 410
           GC NC  FLRM+++K  V   TS +F G++A+  P  SWV KWQR+S F +G+YA SVSG
Sbjct: 32  GCENCEEFLRMKNNKDNVYDHTSNNFDGIIALTTPTDSWVAKWQRLSRFTRGIYAISVSG 91

Query: 411 RLPAGVIXXMKXRGIAYRPRDTSQR 485
            LP   +  MK RGI Y+ RD SQR
Sbjct: 92  TLPQSTLRDMKNRGIVYKSRDRSQR 116


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,229,426
Number of Sequences: 53049
Number of extensions: 342773
Number of successful extensions: 441
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 439
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 441
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6641632230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)