Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G24.2
         (1235 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M60830-1|AAA35816.1|  448|Homo sapiens protein ( Human EVI2B3P g...    31   8.6  
BC005926-1|AAH05926.1|  448|Homo sapiens ecotropic viral integra...    31   8.6  

>M60830-1|AAA35816.1|  448|Homo sapiens protein ( Human EVI2B3P
           gene, exon and complete cds. ).
          Length = 448

 Score = 31.1 bits (67), Expect = 8.6
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = +1

Query: 475 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 645
           PPK +  T+   +  +  P  K++     +  P +TV N+P  S  G  L    + QTP 
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196

Query: 646 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 783
            N   +I ++     +  M   II +V+     KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243


>BC005926-1|AAH05926.1|  448|Homo sapiens ecotropic viral
           integration site 2B protein.
          Length = 448

 Score = 31.1 bits (67), Expect = 8.6
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
 Frame = +1

Query: 475 PPKLYADTYNYLNEKLMQPVVKEVYHDLNTISPANTVMNNPIASQIGLPL---QSGQTPL 645
           PPK +  T+   +  +  P  K++     +  P +TV N+P  S  G  L    + QTP 
Sbjct: 138 PPKSFVYTFTQQSSSVQIPSRKQITVHNPSTQPTSTVKNSP-RSTPGFILDTTSNKQTPQ 196

Query: 646 NNLTQNIPSVNNPAKI-GMGPEIINMVMGSSGNKPKIQESHIAGQVP 783
            N   +I ++     +  M   II +V+     KP + + + AG+ P
Sbjct: 197 KNNYNSIAAILIGVLLTSMLVAIIIIVLWKCLRKPVLNDQNWAGRSP 243


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 152,336,386
Number of Sequences: 237096
Number of extensions: 3304212
Number of successful extensions: 5318
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5318
length of database: 76,859,062
effective HSP length: 92
effective length of database: 55,046,230
effective search space used: 17559747370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)