Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G23.2
         (1136 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_0981 - 25027336-25027596,25028017-25028361,25028681-250288...    32   0.73 
08_01_0793 - 7685702-7686955                                           29   6.8  

>12_02_0981 -
           25027336-25027596,25028017-25028361,25028681-25028827,
           25028906-25029970
          Length = 605

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 3/70 (4%)
 Frame = +2

Query: 461 GLPPRGVCLRNV*PRXPLVRIWARG---PTSWMLLWEGEPEYVGDRPRIFSPPIRQLNVP 631
           GLP   V    V  R P+V ++  G      W+ +W   P Y+ DR +  +PPI   NV 
Sbjct: 47  GLPDAAVS--RVLDRLPVVDLFRLGYLFSPRWLHIWRARPLYLHDR-QFTTPPIPAANVA 103

Query: 632 TRILRLEFNH 661
             I  +  +H
Sbjct: 104 NAITNVLHHH 113


>08_01_0793 - 7685702-7686955
          Length = 417

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 15/53 (28%), Positives = 22/53 (41%)
 Frame = +2

Query: 182 EEDPEQQIVEQFVQNVEDFSSQYGSEISVSYTAFNLRGPPSNFPDYGDYPQAF 340
           +  P  Q    F Q+    S  +      ++  FN  GPP+N+  YG  P  F
Sbjct: 23  QNSPPTQFPSTFSQSQFPQSPHFTQASPPNFQTFNPFGPPANYHLYGSSPPNF 75


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,099,448
Number of Sequences: 37544
Number of extensions: 407730
Number of successful extensions: 864
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 850
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 864
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)