Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_G19.2
(1308 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0483 - 8804021-8804485 40 0.004
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 40 0.004
01_01_0229 - 1943473-1943922 40 0.004
03_02_0484 + 8805053-8805538 40 0.006
01_01_0231 + 1951047-1951499 39 0.008
03_02_0478 + 8775892-8776377 39 0.010
01_01_0227 + 1933247-1933699 38 0.013
03_02_0485 - 8808139-8808618 38 0.017
02_01_0222 + 1450233-1450766 36 0.053
06_01_1017 - 7951985-7952425 33 0.38
11_02_0041 - 7669692-7670312 33 0.50
02_02_0077 - 6586638-6587165 33 0.66
05_05_0315 - 24030695-24030787,24030896-24030995,24031120-240312... 31 2.7
05_02_0003 + 5520331-5520476,5520572-5520644,5520762-5520928,552... 30 4.6
03_05_0543 - 25404630-25405408,25405461-25405605 30 4.6
12_02_1174 - 26696869-26698191 29 6.1
>03_02_0483 - 8804021-8804485
Length = 154
Score = 39.9 bits (89), Expect = 0.004
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 362 EXISVKXADGYVI-VEGKH----EEXQDXHGYISR---QFTRRYALPENCNPDTVESRLS 517
E + V+ DG V+ + G+ EE D + R +F RR+ LPEN P+ +++ +
Sbjct: 70 EEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 128
Query: 518 SDGVLTVIAPRTPAATKNERAVPIT 592
+GVLTV P+ + +++ IT
Sbjct: 129 ENGVLTVTVPKEEPKKPDVKSIQIT 153
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 39.9 bits (89), Expect = 0.004
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = +2
Query: 275 ALANSAVGSTITSNXDKFQVNLXVQHFSPEXISVKXADGYVIV-----EGKHEEXQDXHG 439
A AN+ + T F+ +L E + V+ +G V+V + E+ D
Sbjct: 39 AFANARIDWKETPESHVFKADLP--GVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 440 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 592
+ R QF RR+ LPEN D V++ L +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGL-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>01_01_0229 - 1943473-1943922
Length = 149
Score = 39.9 bits (89), Expect = 0.004
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = +2
Query: 275 ALANSAVGSTITSNXDKFQVNLXVQHFSPEXISVKXADGYVIV-----EGKHEEXQDXHG 439
A AN+ V T F+ +L E + V+ +G V+V + E+ D
Sbjct: 38 AFANARVDWKETPESHVFKADLP--GVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 95
Query: 440 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 592
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 96 RVERSSGQFMRRFRLPENAKVDQVKASM-ENGVLTVTVPKAEVKKPEVKAIEIS 148
>03_02_0484 + 8805053-8805538
Length = 161
Score = 39.5 bits (88), Expect = 0.006
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 362 EXISVKXADGYVI-VEGKH----EEXQDXHGYISR---QFTRRYALPENCNPDTVESRLS 517
E + V+ DG V+ + G+ EE D + R +F RR+ LPEN P+ +++ +
Sbjct: 77 EEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 135
Query: 518 SDGVLTVIAPRTPAATKNERAVPIT 592
+GVLTV P+ + +++ +T
Sbjct: 136 ENGVLTVTVPKEEPKKPDVKSIQVT 160
>01_01_0231 + 1951047-1951499
Length = 150
Score = 39.1 bits (87), Expect = 0.008
Identities = 32/114 (28%), Positives = 52/114 (45%), Gaps = 8/114 (7%)
Frame = +2
Query: 275 ALANSAVGSTITSNXDKFQVNLXVQHFSPEXISVKXADGYVIV-----EGKHEEXQDXHG 439
A AN+ + T F+ +L E + V+ +G V+V + E+ D
Sbjct: 39 AFANARIDWKETPESHVFKADLP--GVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWH 96
Query: 440 YISR---QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 592
+ R QF RR+ LPEN D V++ + +GVLTV P+ +A+ I+
Sbjct: 97 RVERSSGQFMRRFRLPENAKVDQVKAGM-ENGVLTVTVPKAEVKKPEVKAIEIS 149
>03_02_0478 + 8775892-8776377
Length = 161
Score = 38.7 bits (86), Expect = 0.010
Identities = 24/85 (28%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Frame = +2
Query: 362 EXISVKXADGYVI-VEGKH----EEXQDXHGYISR---QFTRRYALPENCNPDTVESRLS 517
E + V+ DG ++ + G+ EE D + R +F RR+ LP+N P+ +++ +
Sbjct: 77 EEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPEQIKASM- 135
Query: 518 SDGVLTVIAPRTPAATKNERAVPIT 592
+GVLTV P+ A + +++ I+
Sbjct: 136 ENGVLTVTVPKEEAKKPDVKSIQIS 160
>01_01_0227 + 1933247-1933699
Length = 150
Score = 38.3 bits (85), Expect = 0.013
Identities = 21/64 (32%), Positives = 33/64 (51%)
Frame = +2
Query: 401 VEGKHEEXQDXHGYISRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERA 580
V+GK++E S +F RR+ LP D V + + +GVLTV P+ +A
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVPKEETKKPQLKA 145
Query: 581 VPIT 592
+PI+
Sbjct: 146 IPIS 149
>03_02_0485 - 8808139-8808618
Length = 159
Score = 37.9 bits (84), Expect = 0.017
Identities = 24/85 (28%), Positives = 45/85 (52%), Gaps = 8/85 (9%)
Frame = +2
Query: 362 EXISVKXADGYVI-VEGKH----EEXQDXHGYISR---QFTRRYALPENCNPDTVESRLS 517
E + V+ DG ++ + G+ EE D + R +F RR+ LPEN P+ +++ +
Sbjct: 75 EEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPEQIKASM- 133
Query: 518 SDGVLTVIAPRTPAATKNERAVPIT 592
+GVLTV P+ + +++ I+
Sbjct: 134 ENGVLTVTVPKEEPKKPDVKSIQIS 158
>02_01_0222 + 1450233-1450766
Length = 177
Score = 36.3 bits (80), Expect = 0.053
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = +2
Query: 446 SRQFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPIT 592
S +F R LP N N D V + L + GVLT+ P+ + R +PIT
Sbjct: 129 SERFVRTVRLPPNANTDGVHAALDN-GVLTITIPKDNDRKPHARIIPIT 176
>06_01_1017 - 7951985-7952425
Length = 146
Score = 33.5 bits (73), Expect = 0.38
Identities = 23/89 (25%), Positives = 43/89 (48%), Gaps = 4/89 (4%)
Frame = +2
Query: 335 NLXVQHFSPEXISVKXADGYVIVEGKHEEXQDXHGYISR----QFTRRYALPENCNPDTV 502
++ VQ ++V+ A + E + E +D +++ +F R ALP + +
Sbjct: 54 DVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQI 113
Query: 503 ESRLSSDGVLTVIAPRTPAATKNERAVPI 589
+ + + GVLTV+ P+ PA + R PI
Sbjct: 114 RASVDN-GVLTVVVPKEPAPAR-PRTRPI 140
>11_02_0041 - 7669692-7670312
Length = 206
Score = 33.1 bits (72), Expect = 0.50
Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 1/51 (1%)
Frame = +2
Query: 452 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPAATKNE-RAVPITQTG 601
+F RR+ +P + V +RL DGVLTV P+ P E R V I G
Sbjct: 141 RFWRRFRMPPGADVGRVAARLD-DGVLTVTVPKVPGHRGREPRVVAIDGAG 190
>02_02_0077 - 6586638-6587165
Length = 175
Score = 32.7 bits (71), Expect = 0.66
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 452 QFTRRYALPENCNPDTVESRLSSDGVLTV-IAPRTPAATKNERAVPITQTG 601
+F RR+ LPE+ + D V + DGVLTV + + P K R V + G
Sbjct: 117 KFMRRFPLPESADLDGVRAEY-KDGVLTVTVDKKPPPEPKKPRVVEVKVAG 166
>05_05_0315 -
24030695-24030787,24030896-24030995,24031120-24031247,
24031350-24031517,24031626-24031741,24031773-24031896,
24032085-24032254,24032255-24032999
Length = 547
Score = 30.7 bits (66), Expect = 2.7
Identities = 17/46 (36%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Frame = +2
Query: 131 CCH-SSWVFPTXPPSRSGL-RPGASSGPLSCXAVITPTXSSAXSRP 262
CC S P PP+ SG RP S+G + A I+P+ + A ++P
Sbjct: 4 CCPPGSSSEPDPPPASSGSSRPAGSAGAAASPATISPSAAPAPAKP 49
>05_02_0003 +
5520331-5520476,5520572-5520644,5520762-5520928,
5520929-5521223,5521531-5521674,5521756-5521890,
5522004-5522093,5523702-5523809,5523905-5523986,
5525362-5525417,5525888-5525986,5526090-5526394,
5526898-5527075,5527167-5527280,5527376-5527507,
5527614-5527718
Length = 742
Score = 29.9 bits (64), Expect = 4.6
Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 443 ISRQFTRRYA-LPENCNPDTVESRLSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEI 619
+ + FTR Y+ N RL + ++ P + K++ V T P +KE
Sbjct: 328 VCKWFTREYSDTTYGKNAQLAAKRLKATQPIST-QPDKEESNKDDLFVEPIYTIPAKKEE 386
Query: 620 KEPTAEVESNETK 658
+PT ++ESN T+
Sbjct: 387 VQPTKDLESNSTE 399
>03_05_0543 - 25404630-25405408,25405461-25405605
Length = 307
Score = 29.9 bits (64), Expect = 4.6
Identities = 15/64 (23%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +2
Query: 452 QFTRRYALPENCNPDTVESRLSSDGVLTVIAPRTPA-ATKNERAVPIT--QTGPVRKEIK 622
+F + + LP +CN D + ++ ++ + + +TP+ T + P+T P + E +
Sbjct: 80 RFQKDFQLPADCNVDGIRAKFENEALTITLPKKTPSPLTPSPTPSPVTPPPQQPPQPEPR 139
Query: 623 EPTA 634
P A
Sbjct: 140 RPPA 143
>12_02_1174 - 26696869-26698191
Length = 440
Score = 29.5 bits (63), Expect = 6.1
Identities = 25/101 (24%), Positives = 41/101 (40%)
Frame = +2
Query: 332 VNLXVQHFSPEXISVKXADGYVIVEGKHEEXQDXHGYISRQFTRRYALPENCNPDTVESR 511
V + + F E + V+ D + ++ E G +F + LP+NC+ D V +R
Sbjct: 26 VEIALPGFRKEQVRVQ-VDNHGMLRATGERPPAARGGRWVRFKKDLRLPDNCDADAVRAR 84
Query: 512 LSSDGVLTVIAPRTPAATKNERAVPITQTGPVRKEIKEPTA 634
D L + P A AV + ++ E K P A
Sbjct: 85 F-DDHKLIITLPLVAA------AVDVDESSATSPEFKTPPA 118
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,519,651
Number of Sequences: 37544
Number of extensions: 368815
Number of successful extensions: 1070
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1016
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1064
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4085517852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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