Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G16.2
         (1301 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein pro...    38   3e-04
L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein pro...    35   0.001
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    33   0.007
L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    26   0.63 
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    25   1.4  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    23   5.8  

>L01587-1|AAA27734.1|   69|Apis mellifera zinc finger protein
           protein.
          Length = 69

 Score = 37.5 bits (83), Expect = 3e-04
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +1

Query: 742 KLFSCDKCNYVTHLRARFTKHVKYHS-MPMIKCIVCDFRTPYKWNLXRHMKNH 897
           K F C+KC+Y    ++    H+K HS +   +C  C + T Y  +L  H++ +
Sbjct: 15  KPFKCEKCSYSCVNKSMLNSHLKSHSNVYQYRCANCTYATKYCHSLKLHLRKY 67



 Score = 25.0 bits (52), Expect = 1.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 326 YNCTKCTFLTLKIHALIWLHTRXHS 400
           Y C  CT+ T   H+L  LH R +S
Sbjct: 45  YRCANCTYATKYCHSL-KLHLRKYS 68



 Score = 23.4 bits (48), Expect = 4.4
 Identities = 13/43 (30%), Positives = 18/43 (41%)
 Frame = +1

Query: 778 HLRARFTKHVKYHSMPMIKCIVCDFRTPYKWNLXRHMKNHGGI 906
           HL      H  + S P  KC  C +    K  L  H+K+H  +
Sbjct: 3   HLEYHLRNH--FGSKPF-KCEKCSYSCVNKSMLNSHLKSHSNV 42


>L01589-1|AAA27736.1|   81|Apis mellifera zinc finger protein
           protein.
          Length = 81

 Score = 35.1 bits (77), Expect = 0.001
 Identities = 17/54 (31%), Positives = 24/54 (44%)
 Frame = +1

Query: 742 KLFSCDKCNYVTHLRARFTKHVKYHSMPMIKCIVCDFRTPYKWNLXRHMKNHGG 903
           K FSC  C  V         H++ H++P  KC +C       W L  H++ H G
Sbjct: 15  KSFSCKYCEKVYVSLGALKMHIRTHTLP-CKCHLCGKAFSRPWLLQGHIRTHTG 67


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 32.7 bits (71), Expect = 0.007
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = +1

Query: 739 DKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLXRHMKNHGG 903
           +K + C+ C+    ++   + H + H+     KC VC+    +   L RHM+ H G
Sbjct: 117 EKPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCERAFEHSGKLHRHMRIHTG 172



 Score = 30.7 bits (66), Expect = 0.029
 Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 1/57 (1%)
 Frame = +1

Query: 736 KDKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLXRHMKNHGG 903
           K++ + CD C        +  +H++ H+     KC VC         L  HM+ H G
Sbjct: 144 KERPYKCDVCERAFEHSGKLHRHMRIHTGERPHKCTVCSKTFIQSGQLVIHMRTHTG 200


>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 26.2 bits (55), Expect = 0.63
 Identities = 15/56 (26%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
 Frame = +1

Query: 739 DKLFSCDKCNYVTHLRARFTKHVKYHSMPM-IKCIVCDFRTPYKWNLXRHMKNHGG 903
           +K F C +C+           H++ H+      C  CD +     NL RH++ H G
Sbjct: 7   EKPFECPECHKRFTRDHHLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTG 62


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
 Frame = +1

Query: 742 KLFSCDKCNYVTHLRARFTKHV--KY-HSMPMIKCIVCD 849
           KLF+C  C  V   +A   +HV  K+       +C++C+
Sbjct: 4   KLFTCQLCGKVLCSKASLKRHVADKHAERQEEYRCVICE 42


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 23.0 bits (47), Expect = 5.8
 Identities = 10/36 (27%), Positives = 18/36 (50%), Gaps = 3/36 (8%)
 Frame = +1

Query: 748 FSCDKCNYVTHLRARFTKHVK-YHSMPMIK--CIVC 846
           F C+ CN +     R  +H++  H+ P  +  C +C
Sbjct: 3   FRCEPCNKILTSLTRLRRHIQNVHTRPSKEPICNIC 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 223,168
Number of Sequences: 438
Number of extensions: 3281
Number of successful extensions: 12
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 44783499
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)