Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G14.2
         (1297 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_02_0206 + 13005863-13005966,13006918-13007080,13008534-130086...    31   1.5  
11_06_0139 - 20531320-20531433,20532146-20532276,20533031-205333...    30   3.5  
11_04_0312 - 16259612-16260231,16260264-16262796                       29   6.1  
02_05_0948 - 33003921-33006269                                         29   8.0  
01_05_0558 - 23273628-23273792,23274118-23274142,23274188-23274393     29   8.0  

>06_02_0206 +
           13005863-13005966,13006918-13007080,13008534-13008632,
           13008704-13008817,13009094-13009254,13009746-13009827,
           13009972-13010057,13011563-13011742,13011913-13012424,
           13012844-13013478
          Length = 711

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
 Frame = +2

Query: 221 ALRNTPICQTRRHTRSL----TSSLTEVKHTKTPDPTMMSLKNAVTPGDVMGLVQSNLPQ 388
           ALRNT   Q    + S     T SLTE+++ +     +  + NA+ PG+  GL Q  +  
Sbjct: 191 ALRNTERQQEAPESSSTPEVPTLSLTEIQNARGVMDVLSEMLNAIDPGNREGLRQEVIVD 250

Query: 389 MTDQ 400
           + DQ
Sbjct: 251 LVDQ 254


>11_06_0139 -
           20531320-20531433,20532146-20532276,20533031-20533382,
           20533384-20533527,20533726-20533875,20534197-20534204,
           20534267-20534471
          Length = 367

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 18/57 (31%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
 Frame = +1

Query: 91  SYLSVYYKNXKNKLKSWYIYNTKQSLY*ILSCDGI--IIEERLEKCTTQHSNLPNKT 255
           S  + Y +   + + + Y   TK+ L   + C  +  IIE  L+KC     NLP KT
Sbjct: 49  SRYAAYQRMSDHMMSNEYAIATKEQLSTRVGCGQVHCIIENGLDKCRVVAPNLPTKT 105


>11_04_0312 - 16259612-16260231,16260264-16262796
          Length = 1050

 Score = 29.5 bits (63), Expect = 6.1
 Identities = 21/69 (30%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
 Frame = +2

Query: 398 QHMLQALRSLFQLQ-KNSNIENSEAVIKD-PAFGLLCQHFKKHARQLDVNETIEAMKVLS 571
           ++  Q+++ L  L   NS+I +     KD  A   LC +  K +R + +  ++E ++VLS
Sbjct: 570 ENFFQSMQQLAVLDMSNSSIHSLLLSTKDLAAVRTLCLNDSKVSRGIWLVSSLENLRVLS 629

Query: 572 YLGVSVNSL 598
             G S++SL
Sbjct: 630 LAGCSIDSL 638


>02_05_0948 - 33003921-33006269
          Length = 782

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +2

Query: 449 NIENSEAVIKDPAFGLLCQHFKKHARQLDVNETIE 553
           N++NS AVIKD A G     F + A  +D N  ++
Sbjct: 589 NVDNSSAVIKDLATGTESTPFVRGAGHVDPNRALD 623


>01_05_0558 - 23273628-23273792,23274118-23274142,23274188-23274393
          Length = 131

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
 Frame = +1

Query: 151 NTKQSLY*ILSCDGI--IIEERLEKCTTQHSNLPNKT 255
           +TK+ L   + C  +  IIE  L+KC    SNLP KT
Sbjct: 75  STKEQLSTRVGCGRVHRIIENDLDKCRVVASNLPTKT 111


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,192,433
Number of Sequences: 37544
Number of extensions: 474724
Number of successful extensions: 928
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 903
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 928
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4038959244
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)