Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G13.2
         (1273 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_05_0800 - 25347048-25347365,25347474-25347563                       30   4.5  
07_03_0461 - 18433138-18433257,18433627-18433699,18434459-18434646     29   5.9  
05_01_0208 - 1501819-1502100,1506048-1506381,1507052-1507542           29   5.9  
01_01_0775 - 6007139-6007574,6007730-6007950                           29   5.9  

>01_05_0800 - 25347048-25347365,25347474-25347563
          Length = 135

 Score = 29.9 bits (64), Expect = 4.5
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
 Frame = +2

Query: 317 TRTSYPAICPNNNMR---RKRGVTPPIYQDKHIF 409
           TRT+  ++ P+  MR   RK+G+ P IY+D  ++
Sbjct: 19  TRTTLRSLVPSQRMRCSMRKKGLHPEIYEDAKVY 52


>07_03_0461 - 18433138-18433257,18433627-18433699,18434459-18434646
          Length = 126

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/70 (22%), Positives = 33/70 (47%)
 Frame = +1

Query: 106 RALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQYEAFVRFNLDQVQRRPPPSTC 285
           R L  F  ++   +++LHD+      ++ ++L T L  + E+  RF++      PPP   
Sbjct: 20  RGLDNFNVLQKAAKKLLHDEAKGCGNDF-TLLHTMLEPKIESQKRFSMPHSSYPPPPDPP 78

Query: 286 MSLGMDAEHM 315
                 ++H+
Sbjct: 79  AQFSPRSKHV 88


>05_01_0208 - 1501819-1502100,1506048-1506381,1507052-1507542
          Length = 368

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 21/81 (25%), Positives = 33/81 (40%)
 Frame = +1

Query: 67  PHQSAHGPQRARTRALFTFKQVRMICERMLHDQEVALRAEYESVLSTKLAEQYEAFVRFN 246
           PH+  H P   R       ++VR +CER++    V L  E E  L      +  A V   
Sbjct: 153 PHKWPHLPPDLRETTTEYSEEVRRLCERLMAVMAVGLGVE-EGRLQEAFGGREGAGVCVR 211

Query: 247 LDQVQRRPPPSTCMSLGMDAE 309
           ++   R P P   + L   ++
Sbjct: 212 VNYYPRCPQPDLTLGLSSHSD 232


>01_01_0775 - 6007139-6007574,6007730-6007950
          Length = 218

 Score = 29.5 bits (63), Expect = 5.9
 Identities = 16/48 (33%), Positives = 27/48 (56%)
 Frame = -3

Query: 545 FCSWSFVLHFFTSASNNTSPSRTPPQSQCLHLLRYLFSRIHYSHIRKY 402
           FC  SFV+ F+  A N       PP ++ LH+ R+  +R  Y+ +R++
Sbjct: 106 FCVSSFVVSFYVPAKNQPD----PPPAEGLHVQRWAGAR--YAAVRRF 147


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,376,309
Number of Sequences: 37544
Number of extensions: 638252
Number of successful extensions: 1451
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1401
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1451
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3945842028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)