Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G12.2
         (1384 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_04_0116 + 19901546-19901737,19901825-19901899,19902034-199021...    53   6e-07
04_03_0889 + 20568984-20569037,20569271-20569345,20569981-205700...    52   8e-07
07_03_1427 + 26495072-26495148,26495323-26495468,26495581-264957...    32   0.92 
04_03_0830 - 20125827-20125913,20126262-20126357,20126974-201270...    29   6.5  
10_05_0043 + 8503979-8504407,8506484-8506624,8506865-8506975,850...    29   8.6  
04_04_1596 + 34684943-34686340,34688085-34688175,34688290-346883...    29   8.6  

>02_04_0116 +
           19901546-19901737,19901825-19901899,19902034-19902115,
           19902219-19902298,19903279-19903482,19903625-19903750,
           19903872-19903985,19904802-19904918
          Length = 329

 Score = 52.8 bits (121), Expect = 6e-07
 Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
 Frame = +1

Query: 670 TLRLVQAFQFT-DKHGEVCPANWRPGAKXIKPDTKAAQEYF 789
           T+R +QA Q+  D   EVCPA W+PG K +KPD K ++EYF
Sbjct: 286 TMRTLQALQYVQDNPDEVCPAGWKPGDKSMKPDPKGSKEYF 326


>04_03_0889 +
           20568984-20569037,20569271-20569345,20569981-20570088,
           20572066-20572179,20572393-20572509
          Length = 155

 Score = 52.4 bits (120), Expect = 8e-07
 Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 1/41 (2%)
 Frame = +1

Query: 670 TLRLVQAFQFTDKH-GEVCPANWRPGAKXIKPDTKAAQEYF 789
           TLR +QA Q+  ++  EVCPA W+PG K +KPD K ++EYF
Sbjct: 112 TLRTLQALQYVQENPDEVCPAGWKPGEKSMKPDPKDSKEYF 152


>07_03_1427 +
           26495072-26495148,26495323-26495468,26495581-26495729,
           26495829-26496224
          Length = 255

 Score = 32.3 bits (70), Expect = 0.92
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +1

Query: 673 LRLVQAFQFTDKHGEVCPANWRPGAKXIKP 762
           +R V A Q   KH    P NW+PG + + P
Sbjct: 192 VRAVDALQTAAKHAVATPVNWKPGERVVIP 221


>04_03_0830 -
           20125827-20125913,20126262-20126357,20126974-20127053,
           20127124-20127220,20127457-20127544,20128491-20128576,
           20129358-20130530
          Length = 568

 Score = 29.5 bits (63), Expect = 6.5
 Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
 Frame = +3

Query: 570 HPLPRNSSSSTXKQKPQAESPSTNLPVGRSV-----EXXPAAGAG 689
           HP P ++SSST      AES S++LP+  S      +  PA+ AG
Sbjct: 73  HPPPASASSSTPTSHVAAESSSSSLPLHPSAAAAARKVIPASAAG 117


>10_05_0043 +
           8503979-8504407,8506484-8506624,8506865-8506975,
           8507746-8508330
          Length = 421

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 11/29 (37%), Positives = 15/29 (51%)
 Frame = +3

Query: 552 WTXEXGHPLPRNSSSSTXKQKPQAESPST 638
           W    GHP+P+  S    K+KP+   P T
Sbjct: 251 WNAHFGHPVPKIVSRKHIKKKPKVVQPLT 279


>04_04_1596 +
           34684943-34686340,34688085-34688175,34688290-34688354,
           34688530-34688581,34688747-34688829,34688942-34689035,
           34689468-34690051
          Length = 788

 Score = 29.1 bits (62), Expect = 8.6
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +3

Query: 570 HPLPRNSSSS--TXKQKPQAESPSTNLPVGRSVEXXPAAGAGVP 695
           HP PR SSSS  +    P + SP    PV  + E   ++G G P
Sbjct: 120 HPSPRVSSSSPRSPTPSPPSSSPPRPAPVVAAAEEPRSSGHGKP 163


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,737,363
Number of Sequences: 37544
Number of extensions: 334088
Number of successful extensions: 1009
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1009
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4350790500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)