Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G12.2
         (1384 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-depend...    52   5e-08
AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin depend...    31   0.078
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           25   6.8  

>AY745234-1|AAU93513.1|   96|Anopheles gambiae thioredoxin-dependent
           peroxidase protein.
          Length = 96

 Score = 51.6 bits (118), Expect = 5e-08
 Identities = 21/32 (65%), Positives = 24/32 (75%)
 Frame = +1

Query: 646 PWGGRWRXTLRLVQAFQFTDKHGEVCPANWRP 741
           P G     TLRL++AFQF +KHGEVCPANW P
Sbjct: 63  PVGRSVDETLRLIKAFQFVEKHGEVCPANWEP 94



 Score = 29.1 bits (62), Expect = 0.32
 Identities = 11/16 (68%), Positives = 13/16 (81%)
 Frame = +3

Query: 453 INTPRKQGGLGPMXHP 500
           INTPRK GGLG + +P
Sbjct: 4   INTPRKAGGLGKLEYP 19


>AY800250-1|AAV68043.1|   97|Anopheles gambiae thioredoxin dependent
           peroxidase protein.
          Length = 97

 Score = 31.1 bits (67), Expect = 0.078
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 652 GGRWRXTLRLVQAFQFTDKHGEVCPANWRPG-AKXIKPDTKAAQ 780
           G  +   LR + + Q TDK     PA+W PG +  ++P   A Q
Sbjct: 26  GRNFAEILRTIDSMQLTDKRRVATPADWMPGDSCMVQPTVPADQ 69


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.6 bits (51), Expect = 6.8
 Identities = 14/51 (27%), Positives = 20/51 (39%)
 Frame = +1

Query: 481  SVPXNIPLXKRTSRTASPAXLRSAGRRXTGIPFRGTLHHRRTSRNLRQNHH 633
            S P   P     S  ASP   + + R  +  P R  L+    +R  R+  H
Sbjct: 1449 STPPASPARLARSSPASPTPSKKSKRHQSASPIRHILNSPLLNRRQRKKQH 1499


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 770,295
Number of Sequences: 2352
Number of extensions: 10875
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 67
effective length of database: 406,395
effective search space used: 159713235
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)