Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G12.2
         (1384 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin ...    77   4e-14
Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical pr...    59   6e-09

>U37429-15|AAN63412.1|  195|Caenorhabditis elegans Peroxiredoxin
           protein 2 protein.
          Length = 195

 Score = 76.6 bits (180), Expect = 4e-14
 Identities = 56/131 (42%), Positives = 67/131 (51%), Gaps = 3/131 (2%)
 Frame = +1

Query: 406 VLGASTELAL-HAPRLXSTRRASRADSVPXNIPLXKRTSRTASPAXLRSAG--RRXTGIP 576
           VL AST+    H   +   R+      +  NIP+   T+   S    R  G  +   GI 
Sbjct: 70  VLAASTDSVFSHLAWINQPRKHGGLGEM--NIPVLADTNHQIS----RDYGVLKEDEGIA 123

Query: 577 FRGTLHHRRTSRNLRQNHHQRTCPWGGRWRXTLRLVQAFQFTDKHGEVCPANWRPGAKXI 756
           FRG L     S+NLRQ       P G     TLRLVQAFQF +KHGEVCPA W PG+  I
Sbjct: 124 FRG-LFIIDPSQNLRQITIN-DLPVGRSVDETLRLVQAFQFVEKHGEVCPAGWTPGSDTI 181

Query: 757 KPDTKAAQEYF 789
           KP  K +QEYF
Sbjct: 182 KPGVKESQEYF 192


>Z32683-2|CAA83619.1|  226|Caenorhabditis elegans Hypothetical
           protein R07E5.2 protein.
          Length = 226

 Score = 59.3 bits (137), Expect = 6e-09
 Identities = 25/48 (52%), Positives = 33/48 (68%)
 Frame = +1

Query: 646 PWGGRWRXTLRLVQAFQFTDKHGEVCPANWRPGAKXIKPDTKAAQEYF 789
           P G     TLR+++AFQF+DKHGEVCPA+W   +  IKP    ++EYF
Sbjct: 174 PVGRSVDETLRVLKAFQFSDKHGEVCPADWHEDSPTIKPGVATSKEYF 221


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,945,741
Number of Sequences: 27780
Number of extensions: 267390
Number of successful extensions: 602
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 558
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 601
length of database: 12,740,198
effective HSP length: 84
effective length of database: 10,406,678
effective search space used: 3912910928
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)