Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_G08.2
(1274 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical pr... 59 6e-09
U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical pr... 50 4e-06
U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical pr... 50 4e-06
DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin p... 50 4e-06
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 42 0.001
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 40 0.004
Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical pr... 39 0.009
DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin p... 39 0.009
Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical pr... 34 0.19
Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical pr... 31 2.3
Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical pr... 29 7.0
Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical pr... 29 7.0
AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical... 29 7.0
AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical ... 29 7.0
AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D pr... 29 7.0
AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 7.0
AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 7.0
AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1 iso... 29 7.0
AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1 iso... 29 7.0
AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C pr... 29 7.0
Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical pr... 29 9.3
AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical ... 29 9.3
>Z92789-7|CAB07215.2| 1319|Caenorhabditis elegans Hypothetical protein
H02I12.1 protein.
Length = 1319
Score = 59.3 bits (137), Expect = 6e-09
Identities = 33/82 (40%), Positives = 39/82 (47%)
Frame = +3
Query: 342 CGYPVEVTCVGSGXIQPAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPG 521
C YP +V SG QT +C ++G F A NC + CV GR M CP G
Sbjct: 1226 CDYPQKV----SGCENHGQTNGECS-EHGSFI---ADANNCEVFYRCVWGRKVVMTCPSG 1277
Query: 522 LAFNPDFSRCDWADLVPSCDAE 587
FNP S CDW VPSC +
Sbjct: 1278 TVFNPLLSVCDWPSAVPSCSGQ 1299
Score = 37.5 bits (83), Expect = 0.020
Identities = 26/104 (25%), Positives = 39/104 (37%), Gaps = 1/104 (0%)
Frame = +3
Query: 459 NCGQYRTCVGGRAFDMV-CPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIG 635
+C C GG F+ C LAFN +CD+ V C+ C G
Sbjct: 1195 DCSAILQCFGGELFEHPSCQSSLAFNQLTGKCDYPQKVSGCENHGQTNGEC-----SEHG 1249
Query: 636 NPLNNVINYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRC 767
+ + + NC F+ C R +++C G F+P C
Sbjct: 1250 SFIADA------NNCEVFYRCVWGRKVVMTCPSGTVFNPLLSVC 1287
Score = 29.1 bits (62), Expect = 7.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDW 557
+ +C F CPPG FN + CD+
Sbjct: 209 FYSCSNNMVFQRYCPPGTVFNINQQSCDF 237
>U10438-1|AAA19083.3| 524|Caenorhabditis elegans Hypothetical
protein B0280.5 protein.
Length = 524
Score = 50.0 bits (114), Expect = 4e-06
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = +3
Query: 438 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 617
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 618 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRARLLSCDIGLAFDPTTGRC-VDADRVQC 791
+ G Y G C F +C RA ++ C GL F +T RC +++ +C
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Query: 792 NAT 800
T
Sbjct: 360 QET 362
Score = 46.4 bits (105), Expect = 4e-05
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 276 AXXMLCPDGLHFNPSVEWPAYPCGYPVEVT-CVGSGXIQPAQTTPDCPHQYGIFKHPNAS 452
A M CP L FNP++ C +P +V C G QP C + G F S
Sbjct: 272 ARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPTPQPT-----C-EEDGYFSFGQCS 321
Query: 453 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
+ C GRA M CP GL F+ RCD+ V C
Sbjct: 322 ----SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.061
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 581
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 624 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 770
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U00055-4|AAA50720.2| 431|Caenorhabditis elegans Hypothetical
protein R02F2.4 protein.
Length = 431
Score = 50.0 bits (114), Expect = 4e-06
Identities = 43/160 (26%), Positives = 60/160 (37%), Gaps = 1/160 (0%)
Frame = +3
Query: 291 CPDGLHFNPSVEWPAYPCGYPVEVTCVGSGXIQPAQTTPDCPHQYGIFKHPNASPTNCGQ 470
CP L FNP++ C +P V +P +C G F S +
Sbjct: 207 CPANLVFNPAIS----SCDWPKNVMDCSEKSEKPQ----NCGEVDGYFSFGRCSSS---- 254
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNN 650
+ C G M CP GL F+ CD+ V CD E GF +A+ P N
Sbjct: 255 FSACTNGIPIVMFCPDGLMFSEKNQMCDYEWNVDECDLES-SGFMENYKASEAL-TPCTN 312
Query: 651 VINYKYEGNCY-YFFSCEQNRARLLSCDIGLAFDPTTGRC 767
+ N Y +C SC+ R + C L F+ + C
Sbjct: 313 MDNGLYALDCTPRVLSCQNGRENIFECPPSLVFNENSLIC 352
Score = 37.9 bits (84), Expect = 0.015
Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Frame = +3
Query: 444 NASPTNCGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
N S + C + +C G A CP L FNP S CDW V C
Sbjct: 184 NISKSECSNVFFSCSEGIAHRRNCPANLVFNPAISSCDWPKNVMDC 229
Score = 35.5 bits (78), Expect = 0.081
Identities = 33/122 (27%), Positives = 47/122 (38%), Gaps = 22/122 (18%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAE----KFLG-----------F 602
++ CV G A M CP L ++ + CDW V C E +F G
Sbjct: 41 RFLACVSGEARYMDCPEDLVYHKNLEFCDWRHNVFECGEEGEENEFSGDGSGESSGDEEI 100
Query: 603 TCPPAPLDAIGNP-LNNVINYKYE-----GNC-YYFFSCEQNRARLLSCDIGLAFDPTTG 761
T + ++ G+ L NV + G C + C R LSC L +DPT
Sbjct: 101 TFGDSSGESSGDELLENVCESLKDGVYSSGTCSSSYIICNSGSPRFLSCSTPLIYDPTNK 160
Query: 762 RC 767
+C
Sbjct: 161 KC 162
Score = 33.1 bits (72), Expect = 0.43
Identities = 38/174 (21%), Positives = 63/174 (36%), Gaps = 5/174 (2%)
Frame = +3
Query: 285 MLCPDGLHFNPSVEWPAYPCGYPVEVTCVGSGXIQ---PAQTTPDCPHQYGIFKHPNASP 455
M CPDGL F+ + Y E SG ++ ++ C + + +P
Sbjct: 266 MFCPDGLMFSEKNQMCDYEWNVD-ECDLESSGFMENYKASEALTPCTNMDNGLYALDCTP 324
Query: 456 TNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIG 635
+ +C GR CPP L FN + CD+ + C E L A +
Sbjct: 325 ----RVLSCQNGRENIFECPPSLVFNENSLICDYPETSLKCCMEDAL--LIRDASIGTYD 378
Query: 636 NPLNNVINYKYEGNCYYFFSCEQNRARLLSC-DIGLAFDPTTGRCVDADRV-QC 791
++ + + Y+ C + C D F + +CVD+ + QC
Sbjct: 379 CSIDGLFSSTLCSRNYH--KCSNGQLIPHECADSNAVFSASAAKCVDSSLLEQC 430
>DQ340624-1|ABC65812.1| 524|Caenorhabditis elegans chondroitin
proteoglycan-2 protein.
Length = 524
Score = 50.0 bits (114), Expect = 4e-06
Identities = 39/123 (31%), Positives = 50/123 (40%), Gaps = 2/123 (1%)
Frame = +3
Query: 438 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPA 617
HPN + + TC GG A M CP L FNP CDW V C G P
Sbjct: 255 HPNGVCST--NFLTCSGGIARIMDCPASLVFNPTILVCDWPRDVAEC-----AGLPTPQP 307
Query: 618 PLDAIGNPLNNVINYKYEGNC-YYFFSCEQNRARLLSCDIGLAFDPTTGRC-VDADRVQC 791
+ G Y G C F +C RA ++ C GL F +T RC +++ +C
Sbjct: 308 TCEEDG--------YFSFGQCSSSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Query: 792 NAT 800
T
Sbjct: 360 QET 362
Score = 46.4 bits (105), Expect = 4e-05
Identities = 34/102 (33%), Positives = 42/102 (41%), Gaps = 1/102 (0%)
Frame = +3
Query: 276 AXXMLCPDGLHFNPSVEWPAYPCGYPVEVT-CVGSGXIQPAQTTPDCPHQYGIFKHPNAS 452
A M CP L FNP++ C +P +V C G QP C + G F S
Sbjct: 272 ARIMDCPASLVFNPTI----LVCDWPRDVAECAGLPTPQPT-----C-EEDGYFSFGQCS 321
Query: 453 PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
+ C GRA M CP GL F+ RCD+ V C
Sbjct: 322 ----SSFTACTNGRAIVMFCPAGLKFSESTVRCDYESNVSEC 359
Score = 35.9 bits (79), Expect = 0.061
Identities = 16/38 (42%), Positives = 19/38 (50%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCD 581
Q+ TC GG A M CP L +N CDW V C+
Sbjct: 40 QFLTCSGGIARIMDCPADLIYNEPLLICDWRHNVIGCE 77
Score = 34.7 bits (76), Expect = 0.14
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 3/52 (5%)
Frame = +3
Query: 624 DAIGNPLNNVINYKYE-GNC--YYFFSCEQNRARLLSCDIGLAFDPTTGRCV 770
+ + N N+ + Y G C YYFF C N AR LSC L +D + +C+
Sbjct: 132 ETVENVCENLEDGAYSSGGCTTYYFF-CTTNTARFLSCPTPLFYDADSQKCI 182
Score = 29.1 bits (62), Expect = 7.0
Identities = 12/36 (33%), Positives = 16/36 (44%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Y C A + CP L ++ D +C W LV C
Sbjct: 155 YFFCTTNTARFLSCPTPLFYDADSQKCIWKSLVEEC 190
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 41.9 bits (94), Expect = 0.001
Identities = 32/114 (28%), Positives = 47/114 (41%), Gaps = 3/114 (2%)
Frame = +3
Query: 462 CGQ-YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGN 638
C Q Y C+ GR+ C PGL +N C + V +C K +D+ N
Sbjct: 902 CSQDYVQCMQGRSLISSCAPGLFYNEKNGMCAYKHTVDTCKIGKGSDI------IDS--N 953
Query: 639 PLNNVINYKYEGNC-YYFFSCEQNRARLLSCDIGLAFDPTTGRCV-DADRVQCN 794
+ Y C Y+FSC + R +SC L F + +CV D +C+
Sbjct: 954 ACFGKSDGYYSAGCSSYYFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECS 1007
Score = 32.3 bits (70), Expect = 0.76
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = +3
Query: 480 CVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
C G+ CP L FNP CD++ V C
Sbjct: 594 CANGQVVATTCPANLIFNPYVGECDYSTNVRDC 626
Score = 32.3 bits (70), Expect = 0.76
Identities = 23/99 (23%), Positives = 38/99 (38%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDAEKFLGFTCPPAPLDAIGNPLNN 650
Y +C+ + M CP L F+ + +C + C L T P P D N
Sbjct: 971 YFSCIDEQIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSNG 1030
Query: 651 VINYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRC 767
+ + K ++ C+ RA +C L ++ T C
Sbjct: 1031 LHHLKMCSP--HYIVCDNGRAFSGTCIAPLVYNGDTQTC 1067
Score = 32.3 bits (70), Expect = 0.76
Identities = 26/103 (25%), Positives = 34/103 (33%), Gaps = 1/103 (0%)
Frame = +3
Query: 273 QAXXMLCPDGLHFNPSVEWPAYPCGYPVEVTCVGSGXIQPAQTTPDCP-HQYGIFKHPNA 449
Q M CP+ L F+ E +P PA + C G+
Sbjct: 978 QIRKMSCPNSLKFSKESEKCVFPIDAKECSIATTLDRTPPAVPSDFCTIRSNGLHHLKMC 1037
Query: 450 SPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
SP Y C GRAF C L +N D C++ C
Sbjct: 1038 SP----HYIVCDNGRAFSGTCIAPLVYNGDTQTCNYKSTNKDC 1076
Score = 31.9 bits (69), Expect = 1.00
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +3
Query: 477 TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 563
TC GRAF CP L FN CD+A+
Sbjct: 452 TCHDGRAFANDCPGDLVFNKATGTCDFAE 480
Score = 29.5 bits (63), Expect = 5.3
Identities = 30/140 (21%), Positives = 49/140 (35%), Gaps = 2/140 (1%)
Frame = +3
Query: 405 PDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSCDA 584
P CP G++ +S +Y CV ++ CP GL F+ +RC+ C
Sbjct: 41 PPCPDGDGLYAVGCSS-----KYLQCVNNVEYEQSCPEGLYFDRLLARCERRSSNHLCAT 95
Query: 585 --EKFLGFTCPPAPLDAIGNPLNNVINYKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTT 758
L ++ +G + K N Y + C + + C + P
Sbjct: 96 GDRVTLNVRQKAVSINCVGRLSGDYALDKTVCNENY-YQCANGISYMRKCPYQQVYVPIL 154
Query: 759 GRCVDADRVQCNATQNTNDK 818
RC CNA+ D+
Sbjct: 155 KRC--DYHTNCNASGGVKDQ 172
Score = 29.1 bits (62), Expect = 7.0
Identities = 22/78 (28%), Positives = 32/78 (41%), Gaps = 2/78 (2%)
Frame = +3
Query: 390 PAQTTPDCPHQYGIFKHPNAS-PTNCGQYR-TCVGGRAFDMVCPPGLAFNPDFSRCDWAD 563
P+ TTP H + N + +C Y +C CP GL ++ +RCD+ +
Sbjct: 775 PSVTTPSPQHAAFCERLENGNYGLDCEDYYISCNNFETTINRCPAGLFYSKLNNRCDYKE 834
Query: 564 LVPSCDAEKFLGFTCPPA 617
V C K T P A
Sbjct: 835 HVEDCPEYKPTPSTTPAA 852
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 39.9 bits (89), Expect = 0.004
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 14/112 (12%)
Frame = +3
Query: 270 SQAXXMLCPDGLHFNPSVEWPAYPCGYPVEVTCVGSGXIQPAQTTPDCPHQYGIFKHPNA 449
S++ M CP GL ++ S+++ C C + P TT P + P
Sbjct: 504 SKSYSMSCPSGLQYSASLKY----CTTSTASGCSVTTTRAPTTTTKSAPTVTTTTRAPTT 559
Query: 450 S--------------PTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWAD 563
+ P++C ++ CV G +++ CP GL+F+ D CD D
Sbjct: 560 TTPAFKCTKDGFFGVPSDCLKFIRCVNGISYNFECPNGLSFHADTMMCDRPD 611
Score = 34.3 bits (75), Expect = 0.19
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 438 HPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRC 551
+PN++ NCG + C+ +++ M CP GL ++ C
Sbjct: 489 YPNSN--NCGLFVLCLSSKSYSMSCPSGLQYSASLKYC 524
Score = 28.7 bits (61), Expect = 9.3
Identities = 12/47 (25%), Positives = 20/47 (42%)
Frame = +3
Query: 660 YKYEGNCYYFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRVQCNAT 800
Y NC F C +++ +SC GL + + C + C+ T
Sbjct: 489 YPNSNNCGLFVLCLSSKSYSMSCPSGLQYSASLKYCTTSTASGCSVT 535
>Z32840-1|CAA83679.1| 584|Caenorhabditis elegans Hypothetical
protein C07G2.1a protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 390 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 569
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 570 PSC 578
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 684 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 800
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>DQ340623-1|ABC65811.1| 584|Caenorhabditis elegans chondroitin
proteoglycan-1 protein.
Length = 584
Score = 38.7 bits (86), Expect = 0.009
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = +3
Query: 390 PAQTTPDCPHQYGIFKHPNASPTNCGQYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLV 569
PA+TT + P + A Y+ CV G+ +C GL F+P+ +RC AD +
Sbjct: 517 PAETTTEVP---ACVEGATAIEPCSQHYKNCVNGQEAIFICENGLFFSPEQARCAPADQI 573
Query: 570 PSC 578
C
Sbjct: 574 AEC 576
Score = 34.3 bits (75), Expect = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
Score = 31.5 bits (68), Expect = 1.3
Identities = 12/40 (30%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 684 YFFSCEQNRARLLSCDIGLAFDPTTGRCVDADRV-QCNAT 800
++ +C + + C+ GL F P RC AD++ +C+ T
Sbjct: 540 HYKNCVNGQEAIFICENGLFFSPEQARCAPADQIAECHQT 579
Score = 30.7 bits (66), Expect = 2.3
Identities = 14/36 (38%), Positives = 16/36 (44%)
Frame = +3
Query: 471 YRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Y C G M CP LAF+ CD+ VP C
Sbjct: 231 YTACSNGYLIPMQCPARLAFDEARVICDYVMNVPEC 266
>Z32840-2|CAD91625.1| 160|Caenorhabditis elegans Hypothetical
protein C07G2.1b protein.
Length = 160
Score = 34.3 bits (75), Expect = 0.19
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +3
Query: 468 QYRTCVGGRAFDMVCPPGLAFNPDFSRCDWADLVPSC 578
Q+ TC GG + M CP L ++P C+++ VP C
Sbjct: 77 QFLTCSGGISRIMDCPADLIYDPRIVACEYSYNVPQC 113
>Z81506-1|CAB04128.1| 555|Caenorhabditis elegans Hypothetical
protein F16H6.1 protein.
Length = 555
Score = 30.7 bits (66), Expect = 2.3
Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Frame = +3
Query: 573 SCDAEKFLGFTCPPAPLDAI--GNPLNNVINYKYEGNCYY 686
S A K+L C L+ I P+ N ++Y GNCYY
Sbjct: 139 SSSAGKWLSGDCDAMILNFICETTPITNTCTFQYNGNCYY 178
>Z81028-3|CAB02691.1| 545|Caenorhabditis elegans Hypothetical
protein B0365.6 protein.
Length = 545
Score = 30.7 bits (66), Expect = 2.3
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 594 LGFTCPPAPLDAIGNPLNNVINYKYEGNCYY 686
L F C AP +P+ + +++Y GNCYY
Sbjct: 145 LNFICETAPT----SPITDTCSFQYNGNCYY 171
>Z68749-6|CAC35818.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68749-5|CAC35817.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-7|CAC35827.1| 689|Caenorhabditis elegans Hypothetical
protein F56H11.1b protein.
Length = 689
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z68219-6|CAC35826.1| 712|Caenorhabditis elegans Hypothetical
protein F56H11.1a protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AL117206-13|CAB60454.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 7.0
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Frame = +3
Query: 336 YPCGYPVEVTCVGSGXIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 500
Y ++ C G P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 501 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 587
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>AL110498-8|CAB57911.2| 1651|Caenorhabditis elegans Hypothetical
protein Y64G10A.7 protein.
Length = 1651
Score = 29.1 bits (62), Expect = 7.0
Identities = 24/94 (25%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Frame = +3
Query: 336 YPCGYPVEVTCVGSGXIQPAQTTPDC-PHQYGI---FKHPNA-SPTNCGQYRTCVGGRAF 500
Y ++ C G P Q DC P +YG F PN C Q +C G
Sbjct: 1463 YGLNCTLDCECYGQARCDPVQGCCDCPPGRYGSRCQFSCPNGFYGWYCSQSCSCQNGAHC 1522
Query: 501 D-----MVCPPGLAFNPDFSRCDWADLVPSCDAE 587
D +CP G + +C P+C +
Sbjct: 1523 DGADGRCLCPAGFQGDKCEQKCSEGSFGPACSQQ 1556
>AF070477-1|AAC24035.1| 589|Caenorhabditis elegans fibulin-1D
precursor protein.
Length = 589
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 123 RTLSCGTGYAMDSETERCRDVD--ECN 147
>AF051403-2|AAC28323.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051403-1|AAC28324.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051402-1|AAC28322.1| 712|Caenorhabditis elegans fibulin-1
isoform C precursor protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AF051401-1|AAC28321.1| 689|Caenorhabditis elegans fibulin-1
isoform D precursor protein.
Length = 689
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>AB212860-1|BAD98165.1| 712|Caenorhabditis elegans fibulin-1C
protein.
Length = 712
Score = 29.1 bits (62), Expect = 7.0
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +3
Query: 714 RLLSCDIGLAFDPTTGRCVDADRVQCN 794
R LSC G A D T RC D D +CN
Sbjct: 223 RTLSCGTGYAMDSETERCRDVD--ECN 247
>Z27078-8|CAH04706.2| 1446|Caenorhabditis elegans Hypothetical protein
K04H4.2c protein.
Length = 1446
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +3
Query: 351 PVEVTCVGSGXIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 518
P VTC I P T CP Y + N P +C G A D +CPP
Sbjct: 1108 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 1167
Query: 519 G 521
G
Sbjct: 1168 G 1168
>Z27078-2|CAA81588.3| 788|Caenorhabditis elegans Hypothetical
protein K04H4.2b protein.
Length = 788
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +3
Query: 351 PVEVTCVGSGXIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 518
P VTC I P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 519 G 521
G
Sbjct: 510 G 510
>Z27078-1|CAA81587.2| 628|Caenorhabditis elegans Hypothetical
protein K04H4.2a protein.
Length = 628
Score = 28.7 bits (61), Expect = 9.3
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 4/61 (6%)
Frame = +3
Query: 351 PVEVTCVGSGXIQPAQTTP---DCPHQYGIFKHP-NASPTNCGQYRTCVGGRAFDMVCPP 518
P VTC I P T CP Y + N P +C G A D +CPP
Sbjct: 450 PASVTCTDEISIGPCTGTGFNGGCPAGYACDSNQVNCCPVVRYTDESCQVGPAIDGLCPP 509
Query: 519 G 521
G
Sbjct: 510 G 510
>AF003135-8|AAK18984.1| 235|Caenorhabditis elegans Hypothetical
protein W03F11.1 protein.
Length = 235
Score = 28.7 bits (61), Expect = 9.3
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 687 FFSCEQNRARLLSCDIGLAFDPTTGRC 767
F+ CE R +++C I +D TTG C
Sbjct: 35 FWKCEGGRWIVVTCQINYFYDATTGFC 61
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,084,669
Number of Sequences: 27780
Number of extensions: 422125
Number of successful extensions: 1170
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 957
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1165
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3558150178
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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