Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP14_F_G06.2
(1256 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 117 4e-27
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 99 6e-22
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 98 2e-21
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 96 1e-20
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 93 1e-19
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 93 1e-19
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 90 5e-19
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 78 3e-15
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 76 9e-15
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 69 1e-12
SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|ch... 63 9e-11
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 46 8e-06
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 46 8e-06
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 42 2e-04
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 39 0.002
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 36 0.016
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 33 0.063
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 28 3.1
SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces ... 27 5.4
SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr 3|||Ma... 27 5.4
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 27 7.2
SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr 1... 26 9.5
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 117 bits (281), Expect = 4e-27
Identities = 59/169 (34%), Positives = 100/169 (59%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
++++G G GK SI+ +YV++ FS+ Y ATIG DF K + + ++ LQLWD AGQ R
Sbjct: 11 VIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEV-LVDDKVVTLQLWDTAGQER 69
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
F ++ +Y+ A +V+DV+ +F+ + W+++ + + P ILL NK D
Sbjct: 70 FQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILLGNKVDV 129
Query: 575 QKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLN 721
+++ + S +K +C+ +G +FETSAKE IN++EA ++ L N
Sbjct: 130 EEQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALEN 178
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 99 bits (238), Expect = 6e-22
Identities = 57/174 (32%), Positives = 90/174 (51%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+++G GK S++ R+V F + +TIG F + L NT + L++WD AGQ R
Sbjct: 17 LVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQER 76
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
+ ++ +YY+ A A +V+D+++ A+ + W +L Q P+G I L NK D
Sbjct: 77 YKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQR--QAPEGIVI--ALAGNKLDL 132
Query: 575 QKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKLLQ 736
+E A + Y E +FETSAK N+ E ++ K+ L DKL Q
Sbjct: 133 AQERRAVEKADAEAYAAEANLL-FFETSAKTAENVNELFTAIAKKLPLEDKLNQ 185
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 98.3 bits (234), Expect = 2e-21
Identities = 55/172 (31%), Positives = 94/172 (54%), Gaps = 2/172 (1%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
++++G G GK ++ ++V+Q FS+ Y ATIG DF K + + ++ LQLWD AGQ R
Sbjct: 11 VVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVV-VDDKLVTLQLWDTAGQER 69
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
F ++ +Y+ A IV++V+ +FD+V W+ + + D A P I++ N+ D+
Sbjct: 70 FQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTS-QDECAFPFIIVGNQIDK 128
Query: 575 QKEGIVNSPAKMDEYCREKGFAGW--FETSAKENINIEEAARSLVNKILLND 724
S + +YC+ K + FE SAKEN N+ + ++ L N+
Sbjct: 129 DASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALENE 180
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 95.9 bits (228), Expect = 1e-20
Identities = 55/175 (31%), Positives = 94/175 (53%), Gaps = 3/175 (1%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLN---WXSNTIIXLQLWDIAG 385
+++ G G GK +++R+V + T+G+DFA ++++ I LQ+WD AG
Sbjct: 12 IVLAGPSGTGKSCLLQRFVKNQWDDQVSHTVGIDFASRIISVGMGNQQKRIKLQIWDTAG 71
Query: 386 QXRFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANK 565
Q +F ++ R YY+ A GA +V+DV+ +F+ + W +D+ A S I +L +K
Sbjct: 72 QEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELSSWLSDIRAMAP----STICVVLAGSK 127
Query: 566 CDQQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKL 730
D Q + V S + E+C EK + ETS+ N+EE S+V+ I+ +L
Sbjct: 128 SDLQNQRQV-STEEAAEFCSEKHISSAHETSSYTGSNVEECFLSVVSTIITRIEL 181
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 92.7 bits (220), Expect = 1e-19
Identities = 56/167 (33%), Positives = 91/167 (54%), Gaps = 1/167 (0%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
LL+IG G GK ++ R+ +++ Y +TIGVDF ++ T+ LQ+WD AGQ R
Sbjct: 11 LLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTV-KLQIWDTAGQER 69
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
F +T YY+ A G IV+DV+ +F+ V +W ++D + +L+ NK D
Sbjct: 70 FRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAV----EGVNRLLVGNKSDM 125
Query: 575 QKEGIVN-SPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 712
+ +V S AK E+ + ETSAK++ N+E+A ++ +I
Sbjct: 126 VDKKVVEYSVAK--EFADSLNIP-FLETSAKDSTNVEQAFLTMSRQI 169
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 92.7 bits (220), Expect = 1e-19
Identities = 52/166 (31%), Positives = 90/166 (54%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
LL+IG G GK ++ R+ F+ + TIG+DF ++ + I LQ+WD AGQ R
Sbjct: 12 LLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRI-KLQIWDTAGQER 70
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
F +T YY+ A+G +++DV+ +FD V W ++++ + IL+ NKCD
Sbjct: 71 FRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHA----SENVYKILIGNKCDC 126
Query: 575 QKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 712
+ + V+ + + ++ + E SAK N+N++EA +L +I
Sbjct: 127 EDQRQVS--FEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 90.2 bits (214), Expect = 5e-19
Identities = 57/178 (32%), Positives = 99/178 (55%), Gaps = 2/178 (1%)
Frame = +2
Query: 218 LVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXRF 397
++IG G GK +++ R+ F+ +TIGV+FA + + N I Q+WD AGQ R+
Sbjct: 14 VLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIV-LDNKKIKAQIWDTAGQERY 72
Query: 398 GNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQQ 577
+T YY+ AVGA IV+D+++ ++FD V +W +L S I +L+ NK D
Sbjct: 73 RAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHAD----SNIVIMLVGNKTDLL 128
Query: 578 KEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI--LLNDKLLQNND 745
V S + + E + + ETSA + N+EEA ++++ +I +++++ L+ D
Sbjct: 129 HLRAV-STEEAQAFAAENNLS-FIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGD 184
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 77.8 bits (183), Expect = 3e-15
Identities = 51/166 (30%), Positives = 84/166 (50%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+ +G GK S+I R+++ F Y ATIG+DF K + T+ LQLWD AGQ R
Sbjct: 14 LVFLGEQSVGKTSLITRFMYDQFDNTYQATIGIDFLSKTMYLEDRTV-RLQLWDTAGQER 72
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
F ++ Y +++ A IV+D++ +F KW D+ A+ G + +L+ NK D
Sbjct: 73 FRSLIPSYIRDSSVAIIVYDITNHNSFVNTEKWIEDVRAE----RGDDVIIVLVGNKTDL 128
Query: 575 QKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 712
+ V + + ++ +E ETSAK N++ R + +
Sbjct: 129 ADKRQV-TQEEGEKKAKELKIM-HMETSAKAGHNVKLLFRKIAQML 172
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 76.2 bits (179), Expect = 9e-15
Identities = 54/173 (31%), Positives = 90/173 (52%), Gaps = 1/173 (0%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNT-IIXLQLWDIAGQX 391
L+++G G GK + +KR++ F + Y AT+GV+ + L++ +N I +WD AGQ
Sbjct: 12 LVLVGDGGTGKTTFVKRHLTGEFEKKYIATLGVE--VHPLHFHTNFGEICFNVWDTAGQE 69
Query: 392 RFGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCD 571
+ G + YY + I+FDV+ T+ V W DL V++ + IP +L NK D
Sbjct: 70 KLGGLRDGYYIQGQCGIIMFDVTSRITYKNVPHWWRDL---VRVCEN--IPIVLCGNKVD 124
Query: 572 QQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKILLNDKL 730
++ + AK + R+K +++ SAK N N E+ L K++ N L
Sbjct: 125 VKERKV---KAKAITFHRKKNLQ-YYDISAKSNYNFEKPFLWLARKLVGNPNL 173
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 69.3 bits (162), Expect = 1e-12
Identities = 47/166 (28%), Positives = 82/166 (49%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+V+G G GK ++ + + F Y TI + K + L + D AGQ
Sbjct: 11 LVVVGDGGVGKSALTIQLIQSHFVDEYDPTIEDSYRKKCEIDGEGAL--LDVLDTAGQEE 68
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCDQ 574
+ M Y + G +V++++ ++FD + + + +++ D P +L+ANKCD
Sbjct: 69 YSAMREQYMRTGEGFLLVYNITSRSSFDEISTFYQQI---LRVKDKDTFPVVLVANKCDL 125
Query: 575 QKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 712
+ E +V S A+ ++ + + ETSAK +N+EEA SLV I
Sbjct: 126 EAERVV-SRAEGEQLAKSM-HCLYVETSAKLRLNVEEAFYSLVRTI 169
>SPAC1565.06c |spg1|sid3|GTPase Spg1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 198
Score = 62.9 bits (146), Expect = 9e-11
Identities = 31/91 (34%), Positives = 50/91 (54%)
Frame = +2
Query: 221 VIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXRFG 400
+IG GK S++ YV F + T+GV+F K ++ NT I +WD+ GQ F
Sbjct: 15 MIGDSSIGKTSLMVTYVQGSFDEESTQTLGVNFMEKTIS-IRNTEITFSIWDLGGQREFV 73
Query: 401 NMTRVYYKEAVGAFIVFDVSRVATFDAVVKW 493
NM + +AV +FD+SR +T +++ +W
Sbjct: 74 NMLPMVCNDAVAILFMFDLSRKSTLNSIKEW 104
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 46.4 bits (105), Expect = 8e-06
Identities = 39/167 (23%), Positives = 77/167 (46%), Gaps = 1/167 (0%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
+ V+G+ GK S+ +YV F + Y TI F+ K + + ++ D AGQ
Sbjct: 9 IAVLGSRSVGKSSLTVQYVENHFVESYYPTIENTFS-KNIKYKGQE-FATEIIDTAGQDE 66
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSA-IPCILLANKCD 571
+ + + G +V+ ++ ++F+ +VK D K+ G+ +P +++ NK D
Sbjct: 67 YSILNSKHSIGIHGYVLVYSITSKSSFE-MVKIVRD---KILNHTGTEWVPIVVVGNKSD 122
Query: 572 QQKEGIVNSPAKMDEYCREKGFAGWFETSAKENINIEEAARSLVNKI 712
+ V A+ + + W E SA+ N N+ A ++++I
Sbjct: 123 LHMQRAVT--AEEGKALANEWKCAWTEASARHNENVARAFELIISEI 167
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 46.4 bits (105), Expect = 8e-06
Identities = 44/170 (25%), Positives = 77/170 (45%), Gaps = 12/170 (7%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
++++G GK S++ + +F Q Y TI ++ + + I L LWD AGQ
Sbjct: 16 IVILGDGAAGKTSLLNVFTKGYFPQVYEPTIFENYIHDI--FVDGNSIELSLWDTAGQEE 73
Query: 395 FGNMTRVYYKEAVGAFIVFDV-SRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKCD 571
+ + + Y + I F V SR + + + KW ++ + + +L+A KCD
Sbjct: 74 YDQLRSLSYSDTHVIMICFAVDSRDSLENVITKWLPEVSSNC-----PGVKLVLVALKCD 128
Query: 572 ---QQKEGIVNSPAKMDEYCREKGFAG--------WFETSAKENINIEEA 688
+E + +S K+ +Y E+G A + E SAK N + EA
Sbjct: 129 LRGADEEQVDHS--KIIDY--EEGLAAAKKINAVRYLECSAKLNRGVNEA 174
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 41.5 bits (93), Expect = 2e-04
Identities = 23/94 (24%), Positives = 44/94 (46%), Gaps = 1/94 (1%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+V+G G GK ++ + F + Y T+ ++ + ++ +I L LWD AGQ
Sbjct: 17 LVVVGDGGCGKTCLLIVFSSGTFPERYVPTVFENYITDITYGPNSKVIELALWDTAGQEE 76
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAVV-KW 493
+ + + Y + + F + A+ + V KW
Sbjct: 77 YDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKW 110
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 38.7 bits (86), Expect = 0.002
Identities = 44/183 (24%), Positives = 79/183 (43%), Gaps = 12/183 (6%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+++G GK ++ + F + Y T+ ++ V + L LWD AGQ
Sbjct: 9 LVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVE--VDGRHVELALWDTAGQED 66
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKCD 571
+ + + Y ++ I F V + D V KW +++ L S++P +L+A K D
Sbjct: 67 YDRLRPLSYPDSHVILICFAVDSPDSLDNVQEKWISEV-----LHFCSSLPILLVACKAD 121
Query: 572 QQKE-GIVNSPAKMDEY--CREKGFA--------GWFETSAKENINIEEAARSLVNKILL 718
+ + I+ +K +++ E+G A + E SAK N + E S +L
Sbjct: 122 LRNDPKIIEELSKTNQHPVTTEEGQAVAQKIGAYKYLECSAKTNEGVREVFESATRAAML 181
Query: 719 NDK 727
K
Sbjct: 182 KHK 184
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 35.5 bits (78), Expect = 0.016
Identities = 28/126 (22%), Positives = 55/126 (43%), Gaps = 1/126 (0%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+V+G GK S++ + +F Y T+ ++ + L LWD AGQ
Sbjct: 11 LVVVGDGACGKTSLLSVFTLGYFPTEYVPTVFENYVSDCR--VDGKSVQLALWDTAGQEE 68
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKCD 571
+ + + Y +A + F + + + V KW +++ P+ +P IL+ K D
Sbjct: 69 YERLRPMSYAKAHIILVGFAIDSPDSLENVSTKWIEEIN--TLCPN---VPFILVGMKAD 123
Query: 572 QQKEGI 589
+ + +
Sbjct: 124 LRSDPV 129
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 33.5 bits (73), Expect = 0.063
Identities = 30/124 (24%), Positives = 54/124 (43%), Gaps = 1/124 (0%)
Frame = +2
Query: 215 LLVIGALGPGKPSIIKRYVHQFFSQHYXATIGVDFALKVLNWXSNTIIXLQLWDIAGQXR 394
L+++G GK ++ + F + Y T+ ++ V I L LWD AGQ
Sbjct: 9 LVIVGDGACGKTCLLIVFSKGTFPEVYVPTVFENYVADVE--VDGRHIELALWDTAGQED 66
Query: 395 FGNMTRVYYKEAVGAFIVFDVSRVATFDAV-VKWKNDLDAKVQLPDGSAIPCILLANKCD 571
+ + + Y ++ I F V + D V KW +++ L S +P +L+ K D
Sbjct: 67 YDRLRPLSYPDSHVVLICFSVDAPESLDNVQEKWISEV-----LHFCSNLPILLVGCKVD 121
Query: 572 QQKE 583
+ +
Sbjct: 122 LRND 125
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 27.9 bits (59), Expect = 3.1
Identities = 14/41 (34%), Positives = 25/41 (60%)
Frame = -3
Query: 1050 IQXIVHYTLMHPECKXEKRX*YKYQXLNYLSNEKQLLNIKN 928
+ +V+YT HP+ K KR +Y +YL E+ +++IK+
Sbjct: 157 LDLLVYYT--HPDTKPPKRRSLRYTDTHYLERER-VMSIKS 194
>SPBC9B6.10 |cdc37||Hsp90 co-chaperone Cdc37|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.1 bits (57), Expect = 5.4
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 242 GKPSIIKRYVHQFFSQHYXATIG 310
GKPS+ K+YVHQ Y +G
Sbjct: 295 GKPSLAKQYVHQALLISYCRQLG 317
>SPCC320.04c |||GTPase Gem1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 630
Score = 27.1 bits (57), Expect = 5.4
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = +2
Query: 524 PDGSAIPCILLANKCDQQKEGIVNSPAKMDEYCREKG 634
PD IPC+ A K D ++ P + DE+ ++ G
Sbjct: 515 PDLQKIPCVFAATKADLDRQQ-QRYPVQPDEFTKQLG 550
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/38 (31%), Positives = 18/38 (47%)
Frame = -3
Query: 696 DRAASSILMFSLADVSNQPAKPFSRQYSSILAGLLTIP 583
+ S L+++ D N P FS +S I G+L P
Sbjct: 1115 ENVGQSSLIYNNRDYMNTPMNDFSLSFSEIKGGILESP 1152
>SPAC1039.06 |||alanine racemase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 415
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +2
Query: 440 FIVFDVSRVATFDAVVKWKNDLDAKVQLPDGSAIPCILLANKC 568
F F V R++ ++K K D K LPD S + CI+ + C
Sbjct: 348 FESFYVDRLSQEHGILKSK---DPKATLPDASQVLCIIPNHSC 387
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,785,880
Number of Sequences: 5004
Number of extensions: 68471
Number of successful extensions: 191
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 176
length of database: 2,362,478
effective HSP length: 75
effective length of database: 1,987,178
effective search space used: 681602054
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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