Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G04.2
         (1318 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_1109 - 24044583-24045218                                         30   3.5  
05_03_0427 - 13886814-13887935                                         29   6.2  

>07_03_1109 - 24044583-24045218
          Length = 211

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = -3

Query: 800 EAVVXLLHYICLPARMDSDFTFKRTLFPYFIPKFHQIVSNKKTLVPNQH 654
           + ++ LLH      R+ + FT      P   P FHQ+V N+ +L+   H
Sbjct: 139 DGLIILLHKRTTAVRVLNPFTGVAVDLPPLAPVFHQVVKNRNSLLYMLH 187


>05_03_0427 - 13886814-13887935
          Length = 373

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -1

Query: 754 WTQTSPLKEHCSHISFQSFIKLFPIR 677
           W Q  P  E+C + SFQSF++  P +
Sbjct: 119 WLQWLPWSEYCYNTSFQSFLRETPFK 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,074,204
Number of Sequences: 37544
Number of extensions: 290314
Number of successful extensions: 451
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 451
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4120436808
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)