Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G02.2
         (1259 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

09_04_0310 + 16578679-16580936,16581027-16581294                       29   5.8  
06_01_0127 - 977667-978719,978875-979051                               29   7.7  

>09_04_0310 + 16578679-16580936,16581027-16581294
          Length = 841

 Score = 29.5 bits (63), Expect = 5.8
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
 Frame = +2

Query: 689 VLHKCTCVYSGWN--VDNRDNYYPITEILDRNPRTDSKEICVALDLNDLIKVRDK 847
           VL KC  +++  N  V N   YY + E+L+ +    S+E+  A DL+DL+   DK
Sbjct: 651 VLRKCQVLFNEMNHFVTNFQ-YYIMFEVLEVSWARFSEEMDSAKDLDDLLLAHDK 704


>06_01_0127 - 977667-978719,978875-979051
          Length = 409

 Score = 29.1 bits (62), Expect = 7.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 529 CTKAFPFRKFCLAEIRCKMGWRYCN 603
           C +  P+R+ CLA  +C+ G  Y N
Sbjct: 130 CARLGPYRRGCLANSQCQFGITYAN 154


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,146,883
Number of Sequences: 37544
Number of extensions: 395778
Number of successful extensions: 949
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 905
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 3899283420
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)