Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G02.2
         (1259 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical pr...    39   0.006
Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical pr...    39   0.006
Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical pr...    39   0.006
Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical pr...    39   0.006
AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.     39   0.006
AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.     39   0.006
AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.      39   0.006
Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical pr...    30   4.0  
Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical pr...    29   6.9  
AC006689-1|AAF39971.2|  257|Caenorhabditis elegans Hypothetical ...    29   9.2  

>Z79639-6|CAB01919.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 687 RVAVKIIKQTRSET 700


>Z79639-5|CAD42645.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 702 RVAVKIIKQTRSET 715


>Z79598-9|CAB01869.3|  957|Caenorhabditis elegans Hypothetical
           protein C44H4.7b protein.
          Length = 957

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 687 RVAVKIIKQTRSET 700


>Z79598-8|CAD42646.2|  972|Caenorhabditis elegans Hypothetical
           protein C44H4.7a protein.
          Length = 972

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 702 RVAVKIIKQTRSET 715


>AF519110-1|AAM74224.1|  957|Caenorhabditis elegans EOR-2B protein.
          Length = 957

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 627 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 686

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 687 RVAVKIIKQTRSET 700


>AF519109-1|AAM74223.1|  972|Caenorhabditis elegans EOR-2A protein.
          Length = 972

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 702 RVAVKIIKQTRSET 715


>AF502570-1|AAM74152.1|  972|Caenorhabditis elegans EOR-2 protein.
          Length = 972

 Score = 39.1 bits (87), Expect = 0.006
 Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
 Frame = +2

Query: 590 GDTVISKLDELN----LWKIDGKALLQKFIPMESN--GRVLHKCTCVYSGWNVDNRDNYY 751
           G  VI K D L     +W++D + LLQKF P   +   R++++ +  YSGW       Y+
Sbjct: 642 GTYVICKADMLKEDCAVWRVDNQNLLQKFPPFRDSKANRLVYRSSSTYSGWCEQISSQYF 701

Query: 752 PITEILDRNPRTDS 793
            +   + +  R+++
Sbjct: 702 RVAVKIIKQTRSET 715


>Z82266-4|CAB05180.1|  227|Caenorhabditis elegans Hypothetical
           protein F23B2.6 protein.
          Length = 227

 Score = 29.9 bits (64), Expect = 4.0
 Identities = 19/66 (28%), Positives = 35/66 (53%)
 Frame = +2

Query: 500 NKSDSSQSKDVPKHFHSGNFVLLKSDVKWDGDTVISKLDELNLWKIDGKALLQKFIPMES 679
           N +++  S D+ + F  G F L K  V ++ +   +   ++ L K D   L+QKF  +  
Sbjct: 86  NLAETVISSDLQELF--GAFNLHKVSVNFNENGGAAGTGDITLKKYDADRLIQKFAGVAL 143

Query: 680 NGRVLH 697
           +G+V+H
Sbjct: 144 DGKVMH 149


>Z92817-4|CAB07297.3|  633|Caenorhabditis elegans Hypothetical
           protein W08G11.4 protein.
          Length = 633

 Score = 29.1 bits (62), Expect = 6.9
 Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
 Frame = +2

Query: 671 MESNGRVLHKCTCVYSGWNV------DNRDNYYPITEILDRNPRTDSKEICVAL 814
           ME NG++  + T  Y G  +       +RD ++   E L+ NP  + KE+  +L
Sbjct: 440 MEMNGKLFDELTSTYKGERLREKQREKDRDAFWKKMEALELNPPAEGKEVTPSL 493


>AC006689-1|AAF39971.2|  257|Caenorhabditis elegans Hypothetical
           protein T22E7.2 protein.
          Length = 257

 Score = 28.7 bits (61), Expect = 9.2
 Identities = 18/63 (28%), Positives = 32/63 (50%)
 Frame = -1

Query: 791 SLCVDCDPVFRLWGNNCHGCQHSTQNTHMYICVKLFHLIPLG*ISVIMLCHQFSTSSVHQ 612
           + C+D      +W NNC G ++      + ICV +F +   G +SV++    + T+S  +
Sbjct: 57  NFCIDDFDHHCVWLNNCIGGKNYRPFVVLVICVNVFSMFCFG-LSVVIF-FSWITNSDER 114

Query: 611 VLI 603
            LI
Sbjct: 115 ALI 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,242,966
Number of Sequences: 27780
Number of extensions: 351461
Number of successful extensions: 959
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 929
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 959
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3505977888
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)