Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP14_F_G01.2
         (1333 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451    115   1e-25
05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009    112   5e-25
05_07_0069 + 27475072-27475136,27475237-27475465,27475532-274756...    96   6e-20
12_01_0899 - 8689125-8689383,8689540-8689826                           31   2.7  
01_01_0498 - 3666752-3667072,3667670-3668061,3668571-3668912,366...    30   4.7  
10_01_0318 + 3493913-3496976,3497064-3497392                           29   8.3  
07_03_0529 - 19107949-19108152,19108857-19109147,19109817-191099...    29   8.3  

>02_05_0995 + 33377933-33378000,33378099-33378327,33378410-33378451
          Length = 112

 Score =  115 bits (276), Expect = 1e-25
 Identities = 55/110 (50%), Positives = 70/110 (63%)
 Frame = +2

Query: 215 RLYAKAVFTGYKXGLRXQHENTVLLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 394
           RLY +    GYK     Q+ENT L+++EG   + +  +Y GK   YVY+AK ++   GG 
Sbjct: 11  RLYVRGTILGYKRSKSNQYENTSLVQIEGVNTKEEVAWYCGKRMAYVYKAKTKS---GG- 66

Query: 395 RGKKTKLXAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 544
               T    IWGKVTRPHGNSG VRAKFKSNLP  +MG ++RV +YPS I
Sbjct: 67  ----TNYRCIWGKVTRPHGNSGVVRAKFKSNLPPASMGRKVRVFMYPSSI 112


>05_07_0061 + 27420442-27420506,27420619-27420847,27420968-27421009
          Length = 111

 Score =  112 bits (270), Expect = 5e-25
 Identities = 53/110 (48%), Positives = 70/110 (63%)
 Frame = +2

Query: 215 RLYAKAVFTGYKXGLRXQHENTVLLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 394
           RLY +    GYK     Q+ENT LL++EG   + +  +YAGK   YVY+AK ++      
Sbjct: 10  RLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS------ 63

Query: 395 RGKKTKLXAIWGKVTRPHGNSGSVRAKFKSNLPAQAMGHRIRVMLYPSRI 544
               + +  IWGKVTRPHGNSG VRAKF+SNLP  +MG ++RV +YPS I
Sbjct: 64  --NDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSMGKKVRVFMYPSSI 111


>05_07_0069 +
           27475072-27475136,27475237-27475465,27475532-27475630,
           27476172-27476287,27476670-27476757
          Length = 198

 Score = 95.9 bits (228), Expect = 6e-20
 Identities = 46/97 (47%), Positives = 60/97 (61%)
 Frame = +2

Query: 215 RLYAKAVFTGYKXGLRXQHENTVLLKVEGAKDRNDAVFYAGKHCVYVYRAKKRTPIPGGP 394
           RLY +    GYK     Q+ENT LL++EG   + +  +YAGK   YVY+AK ++      
Sbjct: 10  RLYVRGTILGYKRSKSNQYENTSLLQIEGVNTKEEVGWYAGKRIAYVYKAKTKS------ 63

Query: 395 RGKKTKLXAIWGKVTRPHGNSGSVRAKFKSNLPAQAM 505
               + +  IWGKVTRPHGNSG VRAKF+SNLP  +M
Sbjct: 64  --NDSTIRCIWGKVTRPHGNSGVVRAKFRSNLPPTSM 98


>12_01_0899 - 8689125-8689383,8689540-8689826
          Length = 181

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -2

Query: 519 RILCPIAWAGRLDLNLART-LPELPCGRVTLPQIAXSLVFLPRGPP 385
           R+L P + A R  +  AR  LPE PC R+ LP+    +  LP  PP
Sbjct: 17  RLLLPASGAARGAV--ARLPLPEPPCARLLLPEPPWGMAALPPEPP 60


>01_01_0498 -
           3666752-3667072,3667670-3668061,3668571-3668912,
           3669982-3670131,3670211-3670308,3670430-3670489,
           3670605-3670676,3670766-3670909,3671003-3671074,
           3671170-3671302,3671649-3671751
          Length = 628

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +1

Query: 136 KSGQGCSSISCGAHKGPSQSIKXPPRQAVRKGRIHRI 246
           KSG  CSS+S      P   +K  P+Q +   R HRI
Sbjct: 206 KSGDNCSSVSMDPLSYPPDDLKTQPQQGI--ARSHRI 240


>10_01_0318 + 3493913-3496976,3497064-3497392
          Length = 1130

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 22/70 (31%), Positives = 36/70 (51%)
 Frame = -2

Query: 561 LAEGS*ILEGYSITRILCPIAWAGRLDLNLARTLPELPCGRVTLPQIAXSLVFLPRGPPG 382
           LA GS +LE       LC  + +G +   LA  LPEL    ++   ++  +   P  PP 
Sbjct: 172 LAAGSSVLEYLD----LCVNSLSGAIPPELAAALPELTYLDLSSNNLSGPM---PEFPPR 224

Query: 381 IGVLFLALYT 352
            G+++L+LY+
Sbjct: 225 CGLVYLSLYS 234


>07_03_0529 -
           19107949-19108152,19108857-19109147,19109817-19109939,
           19110019-19110306
          Length = 301

 Score = 29.1 bits (62), Expect = 8.3
 Identities = 13/21 (61%), Positives = 15/21 (71%)
 Frame = -1

Query: 538 GRIQHHSYSVSHSLGREVRLE 476
           GR+ HHS+ VS  L R VRLE
Sbjct: 124 GRVLHHSFPVSLFLPRNVRLE 144


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,879,209
Number of Sequences: 37544
Number of extensions: 337328
Number of successful extensions: 769
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 746
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 766
length of database: 14,793,348
effective HSP length: 84
effective length of database: 11,639,652
effective search space used: 4178635068
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)